Spectra
Extended spectra database for microorganism identification by MALDI-TOF MS
Extended spectra database for microorganism identification by MALDI-TOF MS
| Organism | Clinical feature | Classification | Likely found in | BSL | Present in Biotyper library | Biotyper MSPs | New MSPs | Comments |
|---|---|---|---|---|---|---|---|---|
| Bacillus acidiceler | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | environment, dust | 1 | No | ||||
| Bacillus acidicola | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Moss | 1 | Yes | DSM 14745T DSM | |||
| Bacillus acidiproducens | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | No | ||||
| Bacillus aeolius | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Water from culcanic origin | 1 | No | ||||
| Bacillus aerius | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Air | 1 | No | ||||
| Bacillus aerophilus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | air | 1 | No | ||||
| Bacillus agaradhaerens | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | Yes | DSM 8721T DSM | |||
| Bacillus aidingensis | Gram+, rod shaped, produce endospores | sediment in salt lake | 1 | No | ||||
| Bacillus akibai | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soda lake | 1 | Yes | CIP 109018T CIP | |||
| Bacillus alcalophilus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Alkaline water | 1 | Yes | B446 UFL, DSM 485T DSM | |||
| Bacillus algicola | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Brown algea | 1 | Yes | CIP 107850T CIP | |||
| Bacillus alkalinitrilicus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | No | ||||
| Bacillus alkalisediminis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | No | ||||
| Bacillus alkalitelluris | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | No | ||||
| Bacillus altitudinis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Air | 1 | Yes | CS 542 4 BRB, CS 809 1 BRB | |||
| Bacillus alveayuensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Deep sea sediment | 1 | Yes | CIP 108784T CIP | |||
| Bacillus amyloliquefaciens | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | Yes | CIP 103265T CIP | |||
| Bacillus amyloliquefaciens ssp amyloliquefasciens | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | No | ||||
| Bacillus amyloliquefaciens ssp plantarum | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | No | ||||
| Bacillus aquimaris | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Seawater | 1 | Yes | DSM 16205T DSM | |||
| Bacillus arsenicus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | Yes | 4_2 TUB, DSM 15822T DSM | |||
| Bacillus aryabhattai | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | No | ||||
| Bacillus asahii | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | Yes | CIP 108638T CIP | |||
| Bacillus atrophaeus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Water | 1 | Yes | DSM 2277 DSM,DSM 5551 DSM, DSM 675 DSM, DSM 7264T DSM | |||
| Bacillus aurantiacus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soda lake | 1 | No | ||||
| Bacillus azotoformans | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | Yes | DSM 1046T DSM | |||
| Bacillus badius | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Feces, dust, water, food, antacids | 1 | Yes | DSM 23T DSM | |||
| Bacillus barbaricus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | Yes | DSM 14730T DSM | |||
| Bacillus bataviensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | Yes | DSM 15601T DSM | |||
| Bacillus beijingensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | No | ||||
| Bacillus benzoevorans | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | Yes | DSM 5391T DSM | |||
| Bacillus berkeleyi | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | No | ||||
| Bacillus beveridgei | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | No | ||||
| Bacillus bogoriensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | No | ||||
| Bacillus boroniphilus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | No | ||||
| Bacillus butanolivorans | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | No | ||||
| Bacillus canaveralius | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | No | ||||
| Bacillus carboniphilus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | Yes | DSM 17613T DSM | |||
| Bacillus cecembensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | No | ||||
| Bacillus cellulosilyticus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | Yes | DSM 2522T DSM | |||
| Bacillus cereus | Gastroenteritis, ocular infections, bacteremia | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Blood samples, feces and urine samples, optical swab | 2 | Yes | 994000168 LBK, 4080 LBK, DSM 31T DSM | ATCC 4342 SMI, ATCC 10702 SMI, ATCC 10987 SMI, F2085-98 SMI, F4810-72 SMI, MHI 1305 SMI, F837-76 SMI, IH41385 SMI, MHI 13 SMI, NVH 0597-98 SMI, NVH 0597-99 SMI, NVH 1518-99 SMI, RIVM BC67 SMI, SJ1 SMI, WSBC 10286 SMI, WSBC 10483 SMI, BC6901 SMI, SMI environmental isolate SMI | |
| Bacillus chagannorensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soda lake | 1 | Yes | CIP 109712T CIP | |||
| Bacillus chungangensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Sea water | 1 | No | ||||
| Bacillus cibi | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Seafood | 1 | Yes | DSM 16189T DSM | |||
| Bacillus circulans | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | CS 220_1a BRB, DSM 11T DSM | ||||
| Bacillus clarkii | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 8720T DSM | ||||
| Bacillus clausii | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 8716T DSM | ||||
| Bacillus coagulans | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil, acid foods | 1 | Yes | B321 UFL, DSM 1T DSM | |||
| Bacillus coahuilensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus cohnii | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 6307T DSM | ||||
| Bacillus daliensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus decisifrondis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus decolorationis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 14890T DSM | ||||
| Bacillus drentensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 15600T DSM | ||||
| Bacillus endophyticus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 13796T DSM | ||||
| Bacillus endoradicis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus farraginis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 16013T DSM | ||||
| Bacillus fastidiosus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | Yes | DSM 91T DSM | |||
| Bacillus firmus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | Yes | DSM 12T DSM | |||
| Bacillus flexus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 1320T DSM, 100331_30 USP | SMI M14-03 SMI | |||
| Bacillus foraminis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus fordii | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 16014T DSM | ||||
| Bacillus fortis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 16012T DSM | ||||
| Bacillus fumarioli | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus funiculus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 15141T DSM | ||||
| Bacillus galactosidilyticus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 15595T DSM | ||||
| Bacillus galliciensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus gelatini | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus gibsonii | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | CS 231_11b BRB, DSM 8722T DSM | ||||
| Bacillus ginsenghumi | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus ginsengi | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus graminis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus halmapalus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 8723T DSM | ||||
| Bacillus halochares | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus halodurans | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 497T DSM | ||||
| Bacillus hemicellulosilyticus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 16731T DSM | ||||
| Bacillus hemicentroti | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus herbersteinensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus horikoshii | produces tetrodotoxin (TTX) | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | liver of fish isolated from soil | 1 | Yes | DSM 8719T DSM | alkaliphilic and alkalitolerant, aerobic endospore-forming bacteria. | |
| Bacillus horneckiae | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Yes | DSM 23495T DSM | |||||
| Bacillus horti | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 12751T DSM | ||||
| Bacillus humi | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 16318T DSM | ||||
| Bacillus hwajinpoensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 16206T DSM | ||||
| Bacillus idriensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | CIP 109494T CIP | ||||
| Bacillus indicus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 15820T DSM | ||||
| Bacillus infantis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | CIP 109493T CIP | ||||
| Bacillus infernus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus iranensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus isabeliae | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus isronensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus jeotgali | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 18226T DSM | ||||
| Bacillus kochii | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus koreensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 16467T DSM | ||||
| Bacillus kribbensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus krulwichiae | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 18225T DSM | ||||
| Bacillus lehensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus lentus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | Yes | DSM 9T DSM | |||
| Bacillus licheniformis | cause of abortion in cattle, sheep and pigs, and also isolated from suppurative lesions of horses and cattle | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil, plants | 1 | Yes | 992000432 LBK, CS 54_1 BRB, DSM 13T DSM | ||
| Bacillus litoralis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 16303T DSM | ||||
| Bacillus localis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus luciferensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 18845T DSM | ||||
| Bacillus luteolus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus macauensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 17262T DSM | ||||
| Bacillus macayae | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus mannanilyticus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 16130T DSM | ||||
| Bacillus marisflavi | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 16204T DSM | ||||
| Bacillus marmarensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus massiliensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | 1I12072947_1e MVD | ||||
| Bacillus megaterium | Non-pathogenic | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | Yes | DSM 32T DSM | ||
| Bacillus methanolicus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus methylotrophicus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus mojavensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 9205T DSM | ||||
| Bacillus muralis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 16288T DSM | ||||
| Bacillus murimartini | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus mycoides | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | Yes | DSM 2048T DSM | |||
| Bacillus nanhaiensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus nanhaiisediminis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus nealsonii | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 15077T DSM | ||||
| Bacillus neizhouensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus niabensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus niacini | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 2923T DSM | ||||
| Bacillus novalis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 15603T DSM | ||||
| Bacillus oceanisediminis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus odysseyi | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 18869T DSM | ||||
| Bacillus okhensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | CIP 109247T CIP | ||||
| Bacillus okuhidensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 13666T DSM | ||||
| Bacillus oleronius | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 9356T DSM | ||||
| Bacillus oshimensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | CIP 108751T CIP | ||||
| Bacillus panaciterrae | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus patagoniensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 16117T DSM | ||||
| Bacillus persepolensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus plakortidis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus pocheonensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus polygoni | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus pseudalcaliphilus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 8725T DSM | ||||
| Bacillus pseudofirmus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | CS 123_1a1 BRB, DSM 8715T DSM, DSM 2516 DSM, DSM 9718 DSM, DSM 9746 DSM, CS 629_2b BRB | ||||
| Bacillus pseudomycoides | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 12442T DSM | ||||
| Bacillus psychrosaccharolyticus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 6T DSM | ||||
| Bacillus pumilus | can cause food poisoning | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 13835 DSM, DSM 1794 DSM, DSM 27T DSM, DSM 354 DSM, IAM 12050 PAH, IAM 12469 PAH | |||
| Bacillus purgationiresistens | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus qingdaonensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus rigui | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus ruris | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 17057T DSM | ||||
| Bacillus safensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | CIP 109412 CIP | ||||
| Bacillus salarius | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 16461T DSM | ||||
| Bacillus saliphilus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus selenatarsenstis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus selenitireducens | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus seohaeanensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 16464T DSM | ||||
| Bacillus shackletonii | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 18868T DSM | ||||
| Bacillus siamensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus simplex | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | CS 206_1aI BRB, DSM 1321T DSM | ||||
| Bacillus siralis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 13140T DSM | ||||
| Bacillus smithii | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | CIP 103790T CIP, DSM 4216T DSM | ||||
| Bacillus soli | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 15604T DSM | ||||
| Bacillus solisalsi | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus sonorensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 13779T DSM | ||||
| Bacillus sp | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | LB_101250b_09 ERL | ||||
| Bacillus sporothermodurans | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 10599T DSM | ||||
| Bacillus stratosphericus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Air | 1 | No | ||||
| Bacillus subterraneus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 13966T DSM | ||||
| Bacillus subtilis | can cause food poisoning | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | 107_W_7_QSA IBS, DSM 5552 DSM, DSM 5611 DSM | |||
| Bacillus subtilis ssp inaquosorum | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus subtilis ssp spizizenii | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 15029T DSM | ||||
| Bacillus subtilis ssp subtilis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 10T DSM, DSM 5660 DSM | ||||
| Bacillus taenensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus taquilensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus thermantarcticus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus thermoamylovorans | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | 10w413986 RLH | ||||
| Bacillus thermocloacae | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus thermolactis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus thioparans | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | CIP 109765T CIP | ||||
| Bacillus thuringiensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 2046T DSM | 4CC1 SMI, ATCC 10792 SMI, ATCC 35646 SMI, BGSC 4AJ1 SMI, BGSC 4AW1 SMI, BGSC 4BD1 SMI, BGSC 4Y1 SMI, CIP 105674 SMI | |||
| Bacillus trypoxylicola | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus tusciae | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus vallismortis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 11031T DSM | ||||
| Bacillus vedderi | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 9768T DSM | ||||
| Bacillus vietnamensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 18898T DSM | ||||
| Bacillus vireti | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 15602T DSM | ||||
| Bacillus wakoensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 2521T DSM | ||||
| Bacillus weihenstephanensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 11821T DSM | DSM 11821 SMI | |||
| Bacillus xiaoxiensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacteroides acidifaciens | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Bacteroides barnesiae | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Bacteroides caccae | Gram-, bacilli, anaerobe but aerotolerant | feces | 2 | Yes | 103 PIM, DSM 19024T DSM | |||
| Bacteroides cellulosilyticus | Gram-, bacilli, anaerobe but aerotolerant | 2 | Yes | CCUG 56000 CCUG, DSM 14838T DSM | ||||
| Bacteroides cellulosolvens | Gram-, bacilli, anaerobe but aerotolerant | water | 1 | No | ||||
| Bacteroides chinchillae | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Bacteroides clarus | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Bacteroides coagulans | Infections following gastrointestinal surgery | Gram-, bacilli, anaerobe but aerotolerant | Gastrointestinal tract | 2 | Yes | DSM 20705T DSM | ||
| Bacteroides coprocola | Gram-, bacilli, anaerobe but aerotolerant | Feces | 2 | Yes | DSM 17136T DSM | |||
| Bacteroides coprophilus | Gram-, bacilli, anaerobe but aerotolerant | Feces | 2 | Yes | DSM 18228T DSM | |||
| Bacteroides coprosuis | Gram-, bacilli, anaerobe but aerotolerant | Pig feces | 2 | No | ||||
| Bacteroides dorei | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Bacteroides eggerthii | Gram-, bacilli, anaerobe but aerotolerant | feces | 2 | Yes | DSM 20697T DSM | |||
| Bacteroides faecichinchillae | Gram-, bacilli, anaerobe but aerotolerant | Chinchilla feces | 2 | No | ||||
| Bacteroides faecis | Gram-, bacilli, anaerobe but aerotolerant | Human feces | 2 | No | ||||
| Bacteroides finegoldii | Gram-, bacilli, anaerobe but aerotolerant | 2 | Yes | DSM 17565T DSM | ||||
| Bacteroides fluxus | Gram-, bacilli, anaerobe but aerotolerant | 2 | Yes | DSM 22534T DSM | ||||
| Bacteroides fragilis | Infections following gastrointestinal surgery | Gram-, bacilli, anaerobe but aerotolerant | Gastrointestinal tract | 2 | Yes | CCM 4508 CCM, CCM 4509 CCM, DSM 2151T DSM, DSM 9669 DSM, HU26938_2 PNU, MB_5088_05 THL, MB_9009_05 THL, PNU BF_6712 PNU, PNU R19811 PNU | ||
| Bacteroides galacturonicus | Gram-, bacilli, anaerobe but aerotolerant | feces | 2 | No | ||||
| Bacteroides gallinarum | Gram-, bacilli, anaerobe but aerotolerant | 2 | Yes | DSM 18171T DSM | ||||
| Bacteroides graminisolvens | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Bacteroides helcogenes | Gram-, bacilli, anaerobe but aerotolerant | Swine abcess | 2 | No | ||||
| Bacteroides intestinalis | Gram-, bacilli, anaerobe but aerotolerant | 2 | Yes | DSM 17393T DSM, SW20 PNU, 110706_E9 LUMC | ||||
| Bacteroides massiliensis | Gram-, bacilli, anaerobe but aerotolerant | 2 | Yes | DSM 17679T DSM | ||||
| Bacteroides nordii | Gram-, bacilli, anaerobe but aerotolerant | 2 | Yes | 49151_2 PNU, DSM 18764T DSM, 22710_0377_Ana IBS | ||||
| Bacteroides oleiciplenus | Gram-, bacilli, anaerobe but aerotolerant | 2 | Yes | DSM 22535T DSM | ||||
| Bacteroides ovatus | Gram-, bacilli, anaerobe but aerotolerant | 2 | Yes | 11483_2 PNU, 32456_1 PNU, 53152 PNU, DSM 1896T DSM, HU36898_1 PNU, IBS_MS_21 IBS | ||||
| Bacteroides paurosaccharolyticus | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Bacteroides pectinophilus | Gram-, bacilli, anaerobe but aerotolerant | feces | 1 | No | ||||
| Bacteroides plebeius | Gram-, bacilli, anaerobe but aerotolerant | 2 | Yes | DSM 17135T DSM | ||||
| Bacteroides polypragmatus | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Bacteroides propionicifaciens | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Bacteroides pyogenes | Gram-, bacilli, anaerobe but aerotolerant | 2 | Yes | 995000355 LBK, DSM 19673T DSM, DSM 20611T DSM, DSM 20612 DSM | ||||
| Bacteroides rodentium | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Bacteroides salanitronis | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Bacteroides salyersiae | Gram-, bacilli, anaerobe but aerotolerant | 2 | Yes | DSM 18765T DSM, IBS_MS_27 IBS, 110706_A7 LUMC, 110706_F7 LUMC | ||||
| Bacteroides sartorii | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Bacteroides stercorirosoris | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Bacteroides stercoris | Gram-, bacilli, anaerobe but aerotolerant | feces | 2 | Yes | DSM 19555T DSM | |||
| Bacteroides thetaiotaomicron | Infections following gastrointestinal surgery | Gram-, bacilli, anaerobe but aerotolerant | Gastrointestinal tract | 2 | Yes | 53164 PNU, ATCC 29742 PNU, CCM 4713 CCM, CCM 6027 CCM, CCM 6028 CCM, DSM 2079T DSM, HU68218_5 PNU, DSM 2255 DSM 2, 71280_ PNU 2 | ||
| Bacteroides uniformis | Infections following gastrointestinal surgery | Gram-, bacilli, anaerobe but aerotolerant | Gastrointestinal tract | 2 | Yes | ATCC 8492T THL, DSM 6597T DSM, HU33120_3_13 PNU, 110706_F9 LUMC | ||
| Bacteroides ureolyticus | Gram-, bacilli, anaerobe but aerotolerant | Urine | 2 | Yes | DSM 20703T DSM, HU33416 PNU | Synonym Campylobacter ureolyticus | ||
| Bacteroides vulgatus | Infections following gastrointestinal surgery | Gram-, bacilli, anaerobe but aerotolerant | Gastrointestinal tract | 2 | Yes | DSM 1447T DSM, DSM 3289 DSM, HU40347_2 PNU, PNU 1536_5 PNU, PNU 71838 PNU | ||
| Bacteroides xylanisolvens | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Bacteroides xylanolyticus | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Balneatrix alpica | Pneumonia and meningitis associated with spa therapy centres | Gram-, bacilli or coccibacilli, polymorphic | cerebrospinal fluid, blood, water | 2 | Yes | CIP 103589T HAM | ||
| Bartonella alsatica | rarely infects humans | Gram-, facultative intercellular parasites | rabbit blood | 2 | No | |||
| Bartonella bacilliformis | Carrion's fever | Gram-, facultative intercellular parasites | blood | 2 | No | |||
| Bartonella birtlesii | Gram-, facultative intercellular parasites | blood | 2 | No | ||||
| Bartonella bovis | Gram-, facultative intercellular parasites | blood | 2 | No | ||||
| Bartonella capreoli | Gram-, facultative intercellular parasites | blood | 2 | No | ||||
| Bartonella chomelii | Gram-, facultative intercellular parasites | blood | 2 | No | ||||
| Bartonella clarridgeiae | cat scratch disease | Gram-, facultative intercellular parasites | blood | 2 | No | |||
| Bartonella coopersplainsensis | Gram-, facultative intercellular parasites | blood | 2 | No | ||||
| Bartonella doshiae | Gram-, facultative intercellular parasites | animal blood | 2 | No | ||||
| Bartonella elizabethae | Gram-, facultative intercellular parasites | blood | 2 | No | ||||
| Bartonella grahamii | endocarditis and neuroretinitis | Gram-, facultative intercellular parasites | animal blood | 2 | No | |||
| Bartonella henselae | cat scratch disease, bacillary angiomatosis, peliosis hepatis, endocarditis, bacteremia with fever and neuroretinitis | Gram-, facultative intercellular parasites | blood | 2 | No | |||
| Bartonella japonica | Gram-, facultative intercellular parasites | blood | 2 | Yes | CIP 109861T CIP | |||
| Bartonella koehlerae | Gram-, facultative intercellular parasites | animal blood | 2 | No | ||||
| Bartonella peromysci | Gram-, facultative intercellular parasites | blood | 2 | No | ||||
| Bartonella queenslandensis | Gram-, facultative intercellular parasites | blood | 2 | No | ||||
| Bartonella quintana | trench fever | Gram-, facultative intercellular parasites | blood | 2 | Yes | 103739 UMR | ||
| Bartonella rattaustraliani | Gram-, facultative intercellular parasites | blood | 2 | No | ||||
| Bartonella rochalimae | Carrion's disease-like symptoms | Gram-, facultative intercellular parasites | blood | 2 | No | |||
| Bartonella schoenbuchensis | Gram-, facultative intercellular parasites | blood | 2 | No | ||||
| Bartonella silvatica | Gram-, facultative intercellular parasites | blood | 2 | No | ||||
| Bartonella talpae | Gram-, facultative intercellular parasites | blood | 2 | No | ||||
| Bartonella taylorii | Gram-, facultative intercellular parasites | blood | 2 | No | ||||
| Bartonella tribocorum | Gram-, facultative intercellular parasites | blood | 2 | No | ||||
| Bartonella vinsonii | Endocarditis | Gram-, facultative intercellular parasites | blood | 2 | No | |||
| Bartonella vinsonii ssp arupensis | Endocarditis | Gram-, facultative intercellular parasites | blood | 2 | No | |||
| Bartonella vinsonii ssp berkhoffii | Endocarditis | Gram-, facultative intercellular parasites | blood | 2 | No | |||
| Bartonella vinsonii ssp vinsonii | Endocarditis | Gram-, facultative intercellular parasites | blood | 2 | No | |||
| Beauveria bassiana | Fungus | Soil | Yes | VML | ||||
| Bergeyella zoohelcum | bacteremia caused by cat or dog bite | Gram-, rods, aerobic, non motile | Cat and dog bites, scratches, sputum, upper respiratory tract | 1 | Yes | LMG 8351T HAM | ||
| Bibersteinia trehalosi | Yes | CCUG 12393 CCUG, CCUG 35739 CCUG, CCUG 37711 CCUG, CCUG 46489 CCUG | ||||||
| Bifidobacterium actinocoloniiforme | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium adolescentis | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20083T DSM, DSM 20086 DSM, DSM 20087 DSM, VA14300_09 ERL | |||
| Bifidobacterium angulatum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20098T DSM, DSM 20225 DSM | |||
| Bifidobacterium animalis | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20105 DSM | |||
| Bifidobacterium animalis ssp animalis | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20104T DSM | |||
| Bifidobacterium animalis ssp lactis | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 10140 DSM | |||
| Bifidobacterium asteroides | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20089T DSM, DSM 20431 DSM | |||
| Bifidobacterium biavatii | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium bifidum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | 17_283 IBS, 48 PIM, DSM 20082 DSM, DSM 20215 DSM, DSM 20239 DSM, DSM 20456T DSM | |||
| Bifidobacterium bohemicum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium bombi | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium boum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20432T DSM | |||
| Bifidobacterium breve | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20091 DSM, DSM 20213T DSM, 110706_G6 LUMC | |||
| Bifidobacterium callitrichos | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium catenulatum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 16992T DSM, DSM 20224 DSM | |||
| Bifidobacterium choerinum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20434T DSM | |||
| Bifidobacterium coryneforme | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20216T DSM | |||
| Bifidobacterium cuniculi | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium dentium | Opportunistic pathogen, caries | Gram+, non motile, often branched anaerobic bacteria | Mouth | 1 | Yes | DSM 20084 DSM, DSM 20221 DSM, DSM 20436T DSM | ||
| Bifidobacterium gallicum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20093T DSM | |||
| Bifidobacterium gallinarum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20670T DSM | |||
| Bifidobacterium indicum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium kashiwanohense | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium longum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | BIFIDO IBS | |||
| Bifidobacterium longum ssp infantis | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20088T DSM | |||
| Bifidobacterium longum ssp longum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20090 DSM, DSM 20097 DSM, DSM 20218 DSM | |||
| Bifidobacterium longum ssp suis | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20211T DSM | |||
| Bifidobacterium magnum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20220 DSM, DSM 20222T DSM | |||
| Bifidobacterium merycicum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 6492T DSM, DSM 6493 DSM, DSM 6494 DSM | |||
| Bifidobacterium minimum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20102T DSM | |||
| Bifidobacterium mongoliense | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium pseudocatenulatum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20439 DSM | |||
| Bifidobacterium pseudolongum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium pseudolongum ssp globosum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium pseudolongum ssp pseudolongum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20099T DSM, DSM 20094 DSM | |||
| Bifidobacterium psychraerophilum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium pullorum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20433T DSM | |||
| Bifidobacterium reuteri | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium ruminantium | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 6489T DSM, DSM 6491 DSM | |||
| Bifidobacterium saeculare | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 6532 DSM, DSM 6533 DSM | |||
| Bifidobacterium saguini | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium scardovii | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium stellenboschense | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium stercoris | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium subtile | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium thermacidophilum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium thermacidophilum ssp porcinum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 17755T DSM | |||
| Bifidobacterium thermacidophilum ssp thermacidophilum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 15837T DSM | |||
| Bifidobacterium thermophilum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20209 DSM, DSM 20210T DSM, DSM 20212 DSM | |||
| Bifidobacterium tsurumiense | Gram+, non motile, often branched anaerobic bacteria | Hamster dental plaque | 1 | No | ||||
| Bilophila sp | Gram-negative anaerobic rod | 2 | Yes | C52 MVO | Bilophila wadsworthia? | |||
| Blastomonas natatoria | Ovoid or rod shaped, Gram- motile, strictly aerobic | Fresh water | 1 | Yes | DSM 3183T HAM | |||
| Blastomonas ursincola | Ovoid or rod shaped, Gram- motile, strictly aerobic | Fresh water | 1 | Yes | DSM 9006T HAM | |||
| Blautia coccoides | Strictly anaerobic, coccoid, non-motile, Gram+ | feces | 1 | Yes | 1035_NCTC 11035T BOG | |||
| Blautia faecis | Strictly anaerobic, coccoid, non-motile, Gram+ | Feces | 1 | No | ||||
| Blautia glucerasea | Strictly anaerobic, coccoid, non-motile, Gram+ | 1 | No | |||||
| Blautia hansenii | Strictly anaerobic, coccoid, non-motile, Gram+ | Feces | 1 | No | ||||
| Blautia hydrogenotrophica | Strictly anaerobic, coccoid, non-motile, Gram+ | Intestines, feces | 1 | No | ||||
| Blautia luti | Strictly anaerobic, coccoid, non-motile, Gram+ | 1 | No | |||||
| Blautia producta | Septicemia | Strictly anaerobic, coccoid, non-motile, Gram+ | Blood | 1 | No | |||
| Blautia schinkii | Strictly anaerobic, coccoid, non-motile, Gram+ | 1 | No | |||||
| Blautia stercoris | Strictly anaerobic, coccoid, non-motile, Gram+ | feces | 1 | No | ||||
| Blautia wexlerae | Strictly anaerobic, coccoid, non-motile, Gram+ | feces | 2 | No | ||||
| Bordetella avium | Gram-, coccobacilli, obligate aerobes except B. petrii | Avian samples | 2 | Yes | DSM 11332T DSM, 10_04379_05 VAXM | SMI 21 SMI | ||
| Bordetella bronchiseptica | Gram-, coccobacilli, obligate aerobes except B. petrii | Animal samples | 2 | Yes | A220 FLR, REF_023 UZB, REF_022 UZB, INE_047 UZB, DSM 13414T DSM, DSM 10303 DSM, DIV_5526 UZB, BORD_781 UZB, BORD_760 UZB | SMI 19 SMI, SMI 20 SMI | ||
| Bordetella hinzii | Gram-, coccobacilli, obligate aerobes except B. petrii | Avian samples | 2 | Yes | DSM 11333T DSM, REF_021 LMG_14052 UZB, REF_024 LMG_15872 UZB, REF_025 LMG_1872 UZB | |||
| Bordetella holmesii | Gram-, coccobacilli, obligate aerobes except B. petrii | 2 | Yes | REF_027 LMG_15945T UZB, DSM 13416T DSM, REF_026 LMG_15946 UZB | ||||
| Bordetella parapertussis | Pertussis, respiratory tract infection | Gram-, coccobacilli, obligate aerobes except B. petrii | animal samples, respiratory tract | 2 | Yes | BORD_565 UZB, BORD_611 UZB, BORD_678 UZB, BORD_699 UZB, BORD_722 UZB, BORD_724 UZB, BORD_750 UZB, DSM 13415T DSM, DSM 4922 DSM, REF_028 ATCC_15237 UZB, REF_507 UZB | SMI 18 SMI, SMI 16 SMI | |
| Bordetella pertussis | Pertussis, respiratory tract infection | Gram-, coccobacilli, obligate aerobes except B. petrii | respiratory tract | 2 | Yes | BORD_246 UZB, BORD_487 UZB, BORD_631 UZB, BORD_653 UZB, DSM 4923 DSM, DSM 4925 DSM, DSM 4926 DSM, DSM 4927 DSM, DSM 5571T DSM, REF_029 ATCC_9340 UZB | SMI 17 SMI, SMI 22 SMI | |
| Bordetella petrii | Gram-, coccobacilli, obligate aerobes except B. petrii | 2 | Yes | 09_0665 UZB, DSM 12804T DSM, REF_504 UZB, REF_505 UZB, VA32495_09 ERL | ||||
| Bordetella sp | Gram-, coccobacilli, obligate aerobes except B. petrii | 2 | Yes | REF_502 UZB | ||||
| Bordetella trematum | Gram-, coccobacilli, obligate aerobes except B. petrii | 2 | Yes | REF_197 LMG_13506 UZB, DSM 11334T DSM, REF_198 LMG_14446 UZB | ||||
| Borrelia afzelii | Borreliosis | Helical filiform spirochete, anaerobic or microaerophilic | Ticks | 2 | No | |||
| Borrelia americana | Helical filiform spirochete, anaerobic or microaerophilic | Ticks | 2 | No | ||||
| Borrelia anserina | Helical filiform spirochete, anaerobic or microaerophilic | Ticks/fleas | 2 | No | ||||
| Borrelia baltazardii | Helical filiform spirochete, anaerobic or microaerophilic | Ticks/fleas | 2 | No | ||||
| Borrelia brasiliensis | Helical filiform spirochete, anaerobic or microaerophilic | Ticks/fleas | 2 | No | ||||
| Borrelia burgdorferi | Borreliosis | Helical filiform spirochete, anaerobic or microaerophilic | Ticks/fleas | 2 | Yes | OE TWF | ||
| Borrelia carolinensis | Helical filiform spirochete, anaerobic or microaerophilic | Ticks/fleas | 2 | No | ||||
| Borrelia caucasica | Helical filiform spirochete, anaerobic or microaerophilic | Ticks/fleas | 2 | No | ||||
| Borrelia coriaceae | Helical filiform spirochete, anaerobic or microaerophilic | Ticks | 2 | No | ||||
| Borrelia crocidurae | Helical filiform spirochete, anaerobic or microaerophilic | Ticks/fleas | 2 | No | ||||
| Borrelia dugesii | Helical filiform spirochete, anaerobic or microaerophilic | Ticks/fleas | 2 | No | ||||
| Borrelia duttonii | Helical filiform spirochete, anaerobic or microaerophilic | Ticks/fleas | 2 | No | ||||
| Borrelia garinii | Borreliosis | Helical filiform spirochete, anaerobic or microaerophilic | Ticks, Cat and dogs | 2 | Yes | AE TWF | ||
| Borrelia graingeri | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | |||||
| Borrelia harveyi | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | |||||
| Borrelia hermsii | Relapsing fever | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | ||||
| Borrelia hispanica | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | |||||
| Borrelia japonica | Helical filiform spirochete, anaerobic or microaerophilic | Ticks, Cat and dogs | 2 | No | ||||
| Borrelia latyschewii | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | |||||
| Borrelia lusitaniae | Borreliosis | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | ||||
| Borrelia mazzottii | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | |||||
| Borrelia miyamotoi | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | |||||
| Borrelia parkeri | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | |||||
| Borrelia persica | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | |||||
| Borrelia recurrentis | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | |||||
| Borrelia sinica | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | |||||
| Borrelia spielmanii | Borreliosis | Helical filiform spirochete, anaerobic or microaerophilic | ticks, blood | 2 | Yes | IE TWF | ||
| Borrelia tanukii | Helical filiform spirochete, anaerobic or microaerophilic | Ticks, Cat and dogs | 2 | No | ||||
| Borrelia theileri | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | |||||
| Borrelia tillae | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | |||||
| Borrelia turcica | Borreliosis and relapsing fever | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | ||||
| Borrelia turdi | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | |||||
| Borrelia turicatae | Relapsing fever | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | ||||
| Borrelia valaisiana | Borreliosis | Helical filiform spirochete, anaerobic or microaerophilic | Cerebral spinal fluid, blood | 2 | No | |||
| Borrelia venezuelensis | Relapsing fever | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | ||||
| Brachybacterium alimentarium | Gram+, aerobe, irregular shaped slender rods, non motile | dairy products | 1 | No | ||||
| Brachybacterium conglomeratum | Gram+, aerobe, irregular shaped slender rods, non motile | 1 | No | |||||
| Brachybacterium faecium | Gram+, aerobe, irregular shaped slender rods, non motile | poultry litter | 1 | Yes | IMET 11352T HKJ | |||
| Brachybacterium fresconis | Gram+, aerobe, irregular shaped slender rods, non motile | 1 | No | |||||
| Brachybacterium muris | Gram+, aerobe, irregular shaped slender rods, non motile | 1 | Yes | 7 RLT | ||||
| Brachybacterium nesterenkovii | Gram+, aerobe, irregular shaped slender rods, non motile | 1 | Yes | DSM 9573T DSM, DSM 9574 DSM | ||||
| Brachybacterium paraconglomeratum | Gram+, aerobe, irregular shaped slender rods, non motile | poultry litter | 1 | No | ||||
| Brachybacterium phenoliresistens | Gram+, aerobe, irregular shaped slender rods, non motile | 1 | No | |||||
| Brachybacterium rhamnosum | Gram+, aerobe, irregular shaped slender rods, non motile | corn fermentation | 1 | No | ||||
| Brachybacterium saurashtrense | Gram+, aerobe, irregular shaped slender rods, non motile | 1 | No | |||||
| Brachybacterium squillarum | Gram+, aerobe, irregular shaped slender rods, non motile | 1 | No | |||||
| Brachybacterium tyrofermentans | Gram+, aerobe, irregular shaped slender rods, non motile | dairy products | 1 | No | ||||
| Brachybacterium zhongshanense | Gram+, aerobe, irregular shaped slender rods, non motile | 1 | No | |||||
| Brachyspira aalborgi | Human intestinal spirochaetosis | Gram-, spiral spirochaete obligate anaerobe | human colon | 1 | No | |||
| Brachyspira alvinipulli | Gram-, spiral spirochaete obligate anaerobe | swine intestine | No | |||||
| Brachyspira hyodysenteriae | Swine dysentery | Gram-, spiral spirochaete obligate anaerobe | swine intestine | 1 | No | |||
| Brachyspira innocens | Human intestinal spirochaetosis | Gram-, spiral spirochaete obligate anaerobe | swine intestine | 1 | No | |||
| Brachyspira intermedia | Swine diarreha | Gram-, spiral spirochaete obligate anaerobe | swine intestine | 1 | No | |||
| Brachyspira murdochii | Human intestinal spirochaetosis | Gram-, spiral spirochaete obligate anaerobe | swine intestine | 1 | Yes | DSM 12563T DSM | ||
| Brachyspira pilosicoli | Human intestinal spirochaetosis | Gram-, spiral spirochaete obligate anaerobe | swine intestine | 2 | No | GD82 GDD, GD83 GDD | ||
| Bradyrhizobium betae | Yes | DSM 17288T DSM | ||||||
| Bradyrhizobium denitrificans | Yes | DSM 1113T DSM | ||||||
| Brenneria alni | disease on trees | Gram-, rods, motile | plants, alder | 1 | Yes | DSM 11811T HAM | ||
| Brenneria nigrifluens | disease on trees | Gram-, rods, motile | plants, walnut | 1 | Yes | DSM 30175T HAM | ||
| Brenneria quercina | disease on trees | Gram-, rods, motile | plants, oak | 1 | Yes | CFBP 3617T MMG, DSM 4561T HAM | ||
| Brenneria rubrifaciens | disease on trees | Gram-, rods, motile | plants, walnut | 1 | Yes | CFBP 3619T MMG, DSM 4483T HAM | ||
| Brenneria salicis | disease on trees | Gram-, rods, motile | plants, salix | 1 | Yes | DSM 30166T HAM | ||
| Brevibacillus agri | Gram+, aerobic, motile rods | soil | 1 | Yes | DSM 6348T DSM | |||
| Brevibacillus aydinogluensis | Gram+, aerobic, motile rods | soil | 1 | No | ||||
| Brevibacillus borstelensis | Gram+, aerobic, motile rods | soil | 1 | Yes | 5_5 TUB, DSM 6347T DSM | |||
| Brevibacillus brevis | Gram+, aerobic, motile rods or Gram negative also | soil | 1 | Yes | DSM 30T DSM, B324 UFL | |||
| Brevibacillus centrosporus | Gram+, aerobic, motile rods | soil | 1 | Yes | DSM 8445T DSM | |||
| Brevibacillus choshinensis | Gram+, aerobic, motile rods | soil | 1 | Yes | DSM 8552T DSM | |||
| Brevibacillus fluminis | Gram+, aerobic, motile rods | soil | 1 | No | ||||
| Brevibacillus formosus | Gram+, aerobic, motile rods | soil | 1 | Yes | DSM 9885T DSM | |||
| Brevibacillus ginsengisoli | Gram+, aerobic, motile rods | soil | 1 | No | ||||
| Brevibacillus invocatus | Gram+, aerobic, motile rods | soil | 1 | Yes | DSM 16423T DSM | |||
| Brevibacillus laterosporus | Gram+, aerobic, motile rods | soil | 1 | Yes | DSM 25T DSM, DSM 8787 DSM | |||
| Brevibacillus levickii | Gram+, aerobic, motile rods | soil | 1 | No | ||||
| Brevibacillus limnophilus | Gram+, aerobic, motile rods | soil | 1 | No | ||||
| Brevibacillus panacihumi | Gram+, aerobic, motile rods | soil | 1 | No | ||||
| Brevibacillus parabrevis | Gram+, aerobic, motile rods | soil, dairy products | 1 | Yes | 090915_03 LBK, DSM 8376T DSM | |||
| Brevibacillus reuszeri | Gram+, aerobic, motile rods | soil | 1 | Yes | DSM 9887T DSM | |||
| Brevibacillus thermoruber | Gram+, aerobic, motile rods | soil | 1 | No | ||||
| Brevibacterium albidum (see Curtobacterium albidum) | Gram+, aerobic rods | soil | 1 | Yes | (see Curtobacterium albidum) | |||
| Brevibacterium antiquum | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium aurantiacum | Gram+, aerobic rods | soil | 1 | Yes | DSM 20426T DSM | |||
| Brevibacterium avium | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium casei | Sepsis in immunocompromized patiens | Gram+, aerobic rods | soil | 1 | Yes | 0808M02034001 IBS, 090915_01 LBK, IMET 10997T HKJ | ||
| Brevibacterium celere | Gram+, aerobic rods | soil | 1 | Yes | DSM 15453T DSM | |||
| Brevibacterium epidermis | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium frigoritolerans | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium halotolerans | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium iodinum | Gram+, aerobic rods | soil, skin | 1 | Yes | DSM 20626T DSM, IMET 10995T HKJ | |||
| Brevibacterium linens | Gram+, aerobic rods | dairy products, human skin, soil | 1 | Yes | IMET 11075T HKJ | |||
| Brevibacterium luteolum | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium marinum | Gram+, aerobic rods | soil | 1 | Yes | DSM 18964T DSM | |||
| Brevibacterium massiliense | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium mcbrellneri | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium oceani | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium otitidis | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium paucivorans | Gram+, aerobic rods | soil | 1 | Yes | 4 RLT, DSM 13657T DSM | |||
| Brevibacterium permense | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium picturae | Gram+, aerobic rods | soil | 1 | Yes | DSM 16132T DSM | |||
| Brevibacterium pityocampae | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium ravenspurgense | Gram+, aerobic rods | soil | 1 | Yes | 2 RLT, 3 RLT, DSM 21258T DSM, DSM 21258T DSM | |||
| Brevibacterium salitolerans | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium samyangense | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium sandarakinum | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium sanguinis | Gram+, aerobic rods | soil | 1 | Yes | 5 RLT, DSM 15677T DSM | |||
| Brevundimonas alba | Gram-, rod, motile, aerobe | soil | 1 | No | ||||
| Brevundimonas aurantiaca | Gram-, rod, motile, aerobe | 1 | Yes | DSM 4731T HAM | ||||
| Brevundimonas aveniformis | Gram-, rod, motile, aerobe | 1 | No | |||||
| Brevundimonas bacteroides | Gram-, rod, motile, aerobe | water | 1 | No | ||||
| Brevundimonas basaltis | Gram-, rod, motile, aerobe | 1 | No | |||||
| Brevundimonas bullata | Gram-, rod, motile, aerobe | 1 | No | |||||
| Brevundimonas diminuta | leaf-spot disease | Gram-, rod, motile, aerobe | plants | 1 | Yes | 021_W20 NFI, DSM 7234T HAM, 900200844 LBK | ||
| Brevundimonas halotolerans | Gram-, rod, motile, aerobe | 1 | No | |||||
| Brevundimonas intermedia | Gram-, rod, motile, aerobe | water | 1 | Yes | DSM 4732T HAM | |||
| Brevundimonas kwangchunensis | Gram-, rod, motile, aerobe | 1 | No | |||||
| Brevundimonas lenta | Gram-, rod, motile, aerobe | soil | 1 | No | ||||
| Brevundimonas mediterranea | Gram-, rod, motile, aerobe | 1 | No | |||||
| Brevundimonas naejangsanensis | Gram-, rod, motile, aerobe | 1 | No | |||||
| Brevundimonas nasdae | Gram-, rod, motile, aerobe | 1 | Yes | DSM 14572T HAM | ||||
| Brevundimonas poindexterae | Gram-, rod, motile, aerobe | 1 | No | |||||
| Brevundimonas sp | Gram-, rod, motile, aerobe | 1 | Yes | 097_NF18 NFI | ||||
| Brevundimonas staleyi | Gram-, rod, motile, aerobe | 1 | No | |||||
| Brevundimonas subvibrioides | Gram-, rod, motile, aerobe | 1 | Yes | DSM 4735T HAM | ||||
| Brevundimonas terrae | Gram-, rod, motile, aerobe | 1 | No | |||||
| Brevundimonas vancanneytii | Gram-, rod, motile, aerobe | blood | 1 | No | ||||
| Brevundimonas variabilis | Gram-, rod, motile, aerobe | 1 | No | |||||
| Brevundimonas vesicularis | septic arthritis in infants | Gram-, rod, motile, aerobe | blood | 1 | Yes | DSM 7226T HAM | ||
| Brochothrix thermosphacta | Yes | DSM 20171T LGL | ||||||
| Budvicia aquatica | Sepsis in immunocompromized patiens | Gram-, Motile rods | Water, feces | 1 | Yes | DSM 5075T HAM | ||
| Bulleidia extructa | Yes | P10bue_li3AN USH, P10flue_li10AN USH | ||||||
| Burkholderia ambifaria | Nonpathogenic | Obligate aerobic, Gram- rods | null | 1 | Yes | DSM 16087T DSM, LMG 11351 HAM | ||
| Burkholderia andropogonis | Nonpathogenic | Obligate aerobic, Gram- rods | Plants | 1 | Yes | DSM 9511T HAM | ||
| Burkholderia anthina | Nonpathogenic | Obligate aerobic, Gram- rods | null | 1 | Yes | DSM 16086T DSM, LMG 16670 HAM | ||
| Burkholderia brasiliensis | Nonpathogenic | Obligate aerobic, Gram- rods | null | 1 | No | null | null | |
| Burkholderia caledonica | Nonpathogenic | Obligate aerobic, Gram- rods | 1 | Yes | LMG 19076T HAM | |||
| Burkholderia caribiensis | Nonpathogenic | Obligate aerobic, Gram- rods | null | 1 | Yes | DSM 13236T HAM | ||
| Burkholderia caryophylli | Nonpathogenic | Obligate aerobic, Gram- rods | Plants | 1 | No | null | null | |
| Burkholderia cenocepacia | Infects plants and opportunistic infections "cepacia syndrome" in patients with cystic fibrosis | Obligate aerobic, Gram- rods | Plants, respiratory tract | 2 | Yes | LMG 12614 HAM, VA 40719_08 ERL | ||
| Burkholderia cepacia | Pulmonary infections | Obligate aerobic, Gram- rods | soil samples, respiratory tract | 2 | Yes | DSM 11737 DSM, DSM 50180 DSM, DSM 50181 DSM, DSM 9241 DSM, LMG 2161 HAM, MB_7544_05 THL, DSM 7288T DSM | ||
| Burkholderia cepacia_Group | Obligate aerobic, Gram- rods | 2 | Yes | 59 RLT, 18875_1 CHB | ||||
| Burkholderia diffusa | Obligate aerobic, Gram- rods | 2 | Yes | DSM 23434T DSM | ||||
| Burkholderia dolosa | Pulmonary infections | Obligate aerobic, Gram- rods | soil samples, respiratory tract | 2 | Yes | DSM 16088T DSM | ||
| Burkholderia fungorum | Nonpathogenic | Obligate aerobic, Gram- rods | null | 1 | Yes | LMG 20227T HAM | ||
| Burkholderia gladioli | Pulmonary infections | Obligate aerobic, Gram- rods | Plants, environmental samples, respiratory tract | 1 | Yes | Wv22575 CHB, BK1959 EVM, DSM 11318 DSM, DSM 4285T DSM, DSM 8361 DSM | ||
| Burkholderia glathei | Nonpathogenic | Obligate aerobic, Gram- rods | Rice pathogen, soil samples | 1 | Yes | DSM 50014T HAM | ||
| Burkholderia glumae | Nonpathogenic | Obligate aerobic, Gram- rods | Rice pathogen, soil samples | 1 | Yes | DSM 9512T HAM | ||
| Burkholderia graminis | Nonpathogenic | Obligate aerobic, Gram- rods | Plants | 1 | No | |||
| Burkholderia hospita | Nonpathogenic | Obligate aerobic, Gram- rods | 1 | No | ||||
| Burkholderia kururiensis | Nonpathogenic | Obligate aerobic, Gram- rods | Soil samples | 1 | No | |||
| Burkholderia lata | Obligate aerobic, Gram- rods | Yes | DSM 23089T DSM | |||||
| Burkholderia latens | Obligate aerobic, Gram- rods | Yes | DSM 23436T DSM | |||||
| Burkholderia metallica | Obligate aerobic, Gram- rods | Yes | DSM 23519T DSM | |||||
| Burkholderia multivorans | Pulmonary infections | Obligate aerobic, Gram- rods | soil samples, respiratory tract | 2 | Yes | DSM 13243T DSM, LMG 14293 HAM, VA40721a_08 ERL, VA40721b_08 ERL, VA40328_07 ERL | ||
| Burkholderia oklahomensis | null | Obligate aerobic, Gram- rods | null | No | null | null | ||
| Burkholderia phenazinium | Nonpathogenic | Obligate aerobic, Gram- rods | soil samples | 1 | Yes | DSM 10684T HAM | ||
| Burkholderia phenoliruptrix | Nonpathogenic | Obligate aerobic, Gram- rods | null | 1 | No | null | null | |
| Burkholderia phymatum | Nonpathogenic | Obligate aerobic, Gram- rods | Symbiotic with legumes, soil samples | 1 | Yes | LMG 21445T HAM | ||
| Burkholderia phytofirmans | Nonpathogenic | Obligate aerobic, Gram- rods | 1 | No | ||||
| Burkholderia plantarii | Nonpathogenic | Obligate aerobic, Gram- rods | Soil samples | 1 | Yes | DSM 9509T HAM | ||
| Burkholderia pyrrocinia | Nonpathogenic | Obligate aerobic, Gram- rods | Soil samples | 1 | Yes | LMG 14191T HAM, DSM 10685T DSM | ||
| Burkholderia sacchari | Nonpathogenic | Obligate aerobic, Gram- rods | 1 | Yes | LMG 19450T HAM | |||
| Burkholderia seminalis | Nonpathogenic | Obligate aerobic, Gram- rods | 1 | Yes | VA40474_09 ERL | |||
| Burkholderia singaporensis | null | Obligate aerobic, Gram- rods | null | No | null | null | ||
| Burkholderia sordidicola | Nonpathogenic | Obligate aerobic, Gram- rods | null | 1 | No | null | null | |
| Burkholderia stabilis | Nonpathogenic | Obligate aerobic, Gram- rods | null | 1 | Yes | LMG 14294T HAM, DSM 16586T DSM | ||
| Burkholderia terricola | Nonpathogenic | Obligate aerobic, Gram- rods | 1 | Yes | LMG 20594T HAM | |||
| Burkholderia thailandensis | Pulmonary infections | Obligate aerobic, Gram- rods | soil samples, respiratory tract | 2 | Yes | DSM 13276T HAM | ||
| Burkholderia tropica | Nonpathogenic | Obligate aerobic, Gram- rods | null | 1 | Yes | DSM 15359T HAM | ||
| Burkholderia tuberum | Nonpathogenic | Obligate aerobic, Gram- rods | Symbiotic with legumes, soil samples | 1 | Yes | LMG 21444T HAM | ||
| Burkholderia ubonensis | Nonpathogenic | Obligate aerobic, Gram- rods | 1 | No | ||||
| Burkholderia unamae | Nonpathogenic | Obligate aerobic, Gram- rods | 1 | No | ||||
| Burkholderia vietnamiensis | Pulmonary infections | Obligate aerobic, Gram- rods | soil samples, respiratory tract | 2 | Yes | LMG 10929T HAM | ||
| Burkholderia xenoverans | Nonpathogenic | Obligate aerobic, Gram- rods | Soil samples | 1 | Yes | LMG 21463T HAM | ||
| Buttiauxella agrestis | Gram-, small rods, motile, facultative anaerobic | Soil/water | 1 | Yes | DSM 4586T HAM | |||
| Buttiauxella brennerae | Gram-, small rods, motile, facultative anaerobic | Soil | 1 | Yes | DSM 9396T HAM | |||
| Buttiauxella ferragutiae | Gram-, small rods, motile, facultative anaerobic | Soil | 1 | Yes | DSM 9390T HAM | |||
| Buttiauxella gaviniae | Gram-, small rods, motile, facultative anaerobic | Soil | 1 | Yes | DSM 9393T HAM | |||
| Buttiauxella izardii | Gram-, small rods, motile, facultative anaerobic | Soil | 1 | Yes | DSM 9397T HAM | |||
| Buttiauxella noackiae | Gram-, small rods, motile, facultative anaerobic | Soil | 1 | Yes | DSM 9401T HAM | |||
| Buttiauxella warmboldiae | Gram-, small rods, motile, facultative anaerobic | Soil | 1 | Yes | DSM 9404T HAM | |||
| Butyricimonas synergistica | Gram-, obligately anaerobic, non spore forming, non motile rods | rat feces | 1 | No | ||||
| Butyricimonas virosa | Gram-, obligately anaerobic, non spore forming, non motile rods | rat feces | 1 | Yes | 144 RLT |