Spectra
Extended spectra database for microorganism identification by MALDI-TOF MS
Extended spectra database for microorganism identification by MALDI-TOF MS
| Organism | Clinical feature | Classification | Likely found in | BSL | Present in Biotyper library | Biotyper MSPs | New MSPs | Comments |
|---|---|---|---|---|---|---|---|---|
| null | null | null | No | null | ||||
| Abiotrophia defectiva | Infective endocarditis | Gram+, anaerobic, Lactic acid bacteria, Cocci | Mouth, urogenital and intestinal tract | 2 | Yes | 42_A241 MHH, DSM 9849T DSM, SR002 IBS | ||
| Acetobacter aceti | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | Yes | B212 UFL, B213 UFL | |||
| Acetobacter aceti ssp aceti | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Acetobacter cerevisiae | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Acetobacter cibinongensis | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Acetobacter estunensis | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Acetobacter fabarum | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Acetobacter farinalis | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Acetobacter ghanensis | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Acetobacter indonesiensis | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Acetobacter liquefaciens | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Acetobacter lovaniensis | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Acetobacter malorum | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Acetobacter nitrogenifigens | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Acetobacter oeni | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Acetobacter orientalis | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Acetobacter orleanensis | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Acetobacter pasteurianus | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | Yes | B208 UFL, B219 UFL, B220 UFL, B546 UFL | |||
| Acetobacter pasteurianus ssp ascendens | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Acetobacter pasteurianus ssp paradoxus | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Acetobacter pasteurianus ssp pasteurianus | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | Yes | B210 UFL,B214 UFL | |||
| Acetobacter peroxydans | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Acetobacter pomorum | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Acetobacter senegalensis | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Acetobacter syzygii | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Acetobacter tropicalis | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Acholeplasma axanthum | Pathogen of farm animals | Aerobic, Wall less bacteria, Gram- | Plants, environmental samples | 2 | No | |||
| Acholeplasma brassicae | Aerobic, Wall less bacteria, Gram- | Plants | 1 | No | ||||
| Acholeplasma cavigenitalium | Aerobic, Wall less bacteria, Gram- | Genital tract of rodents | 1 | No | ||||
| Acholeplasma equifetale | Aerobic, Wall less bacteria, Gram- | Horse fetuses | 2 | No | ||||
| Acholeplasma granularum | Commensal in swine | Aerobic, Wall less bacteria, Gram- | 1 | No | ||||
| Acholeplasma hippikon | Aerobic, Wall less bacteria, Gram- | Horse fetuses | 2 | No | ||||
| Acholeplasma laidlawii | Contaminant in cell culture media | Aerobic, Wall less bacteria, Gram- | environment | 1 | Yes | FLR | ||
| Acholeplasma modicum | Aerobic, Wall less bacteria, Gram- | Lung of cattle | 2 | No | ||||
| Acholeplasma morum | Aerobic, Wall less bacteria, Gram- | Fetal calf serum | 2 | No | ||||
| Acholeplasma multilocale | Aerobic, Wall less bacteria, Gram- | Nasopharynx of horse | 2 | No | ||||
| Acholeplasma oculi | Conjunctivitis in farm animals | Aerobic, Wall less bacteria, Gram- | eye swab | 2 | No | |||
| Acholeplasma palmae | Aerobic, Wall less bacteria, Gram- | plants | 2 | No | ||||
| Acholeplasma parvum | Aerobic, Wall less bacteria, Gram- | Oral cavity of horse | 2 | No | ||||
| Acholeplasma pleciae | Aerobic, Wall less bacteria, Gram- | Insects | 1 | No | ||||
| Acholeplasma vituli | Aerobic, Wall less bacteria, Gram- | Fetal calf serum | 1 | No | ||||
| Achromobacter denitrificans | Strictly aerobic Gram- rods | soil samples | 1 | Yes | DSM 11850 DSM, DSM 30026T DSM, DSM 4612 DSM, | |||
| Achromobacter insolitus | Strictly aerobic Gram- rods | Clinical samples | 1 | Yes | LMG 6003T HAM | |||
| Achromobacter marplatensis | Strictly aerobic Gram- rods | Clinical samples | 1 | No | ||||
| Achromobacter piechaudii | Strictly aerobic Gram- rods | Pharyngeal swab, soil samples | 1 | Yes | DSM 10342T DSM, DSM 11386 DSM | |||
| Achromobacter ruhlandii | Strictly aerobic Gram- rods | Soil samples | 1 | Yes | DSM 653T DSM | |||
| Achromobacter sp | Strictly aerobic Gram- rods | Yes | DSM 30128 DSM, AL908830_BK14941 UKH | |||||
| Achromobacter spanius | Strictly aerobic Gram- rods | Clinical samples | 1 | Yes | 075_W08 NFI, LMG 5911T HAM | |||
| Achromobacter xylosoxidans | Strictly aerobic Gram- rods | Ear swab, soil samples | 1 | Yes | 40 PIM, MU_15202_1 CHB | |||
| Achromobacter xylosoxidans ssp xylosoxidans | Strictly aerobic Gram- rods | Ear swab, soil samples | 1 | Yes | DSM 11852 DSM, DSM 2402T DSM,DSM 6388 DSM | |||
| Acidaminococcus fermentans | Anaerobic diplococci Gram- | Cervical swab, animal intestines | 2 | Yes | DSM 20731T DSM | |||
| Acidaminococcus intestini | Anaerobic diplococci Gram- | Animal intestines, peritoneal fluid | 2 | Yes | 07_136 N3 IBS, DSM 21505T DSM | |||
| Acidiphilium acidophilum | Gram-, aerobic | Acidic coal mine drainage | 1 | Yes | B349 UFL | |||
| Acidiphilium angustum | Gram-, aerobic | Acidic coal mine drainage | 1 | No | ||||
| Acidiphilium cryptum | Gram-, aerobic | Acidic coal mine drainage | 1 | No | ||||
| Acidiphilium multivorum | Gram-, aerobic | Acidic coal mine drainage | 1 | No | ||||
| Acidiphilium organovorum | Gram-, aerobic | Acidic coal mine drainage | 1 | No | ||||
| Acidiphilium rubrum | Gram-, aerobic | Acidic coal mine drainage | 1 | No | ||||
| Acidovorax anthurii | Bacterial leaf-spot of anthurium | Gram-, aerobic | Plants, soil | 1 | No | |||
| Acidovorax avenae | Bacterial fruit blotch of cucurbitaceae | Gram-, aerobic | Soil | 1 | No | |||
| Acidovorax avenae ssp avenae | Bacterial fruit blotch of cucurbitaceae | Gram-, aerobic | Soil | 1 | Yes | DSM 7227T HAM | ||
| Acidovorax caeni | Gram-, aerobic | Soil | 1 | No | ||||
| Acidovorax cattleyae | Bacterial leaf-spot of orchids | Gram-, aerobic | Plants | 1 | No | |||
| Acidovorax citrulli | Bacterial fruit blotch of cucurbitaceae | Gram-, aerobic | Soil, plants | 1 | Yes | LMG 5376T HAM | ||
| Acidovorax defluvii | Gram-, aerobic | Soil | 1 | Yes | DSM 12644T HAM | |||
| Acidovorax delafieldii | Gram-, aerobic | Soil | 1 | Yes | DSM 64T HAM | |||
| Acidovorax facilis | Gram-, aerobic | 1 | Yes | B530 UFL, DSM 649T HAM | ||||
| Acidovorax konjaci | Gram-, aerobic | Soil | 1 | Yes | DSM 7481T HAM | |||
| Acidovorax oryzae | Gram-, aerobic | Soil, rice | 1 | No | ||||
| Acidovorax radicis | Gram-, aerobic | soil | 1 | No | ||||
| Acidovorax soli | Gram-, aerobic | soil | 1 | No | ||||
| Acidovorax temperans | Gram-, aerobic | soil, Urine | 1 | Yes | 3_2 TUB, DSM 7270T HAM | |||
| Acidovorax valerianellae | Pathogen of lamb's lettuce | Gram-, aerobic | Plants | 1 | No | |||
| Acinetobacter baumannii | wound infections, necrotizing fasciitis, bacterimia, pneumonia | Gram-, Strictly aerobic, nonfermentative, bacilli | Soil, Urine, blood, wound swabs, mucosal surfaces | 2 | Yes | 13101_1 CHB, B389 UFL, CS 62_1 BRB, DSM 30007T HAM, DSM 30008 DSM, DSM 30011 DSM, LMG 994 HAM, ECI RUH_875 HCB, ECII RUH_134 HCB, ECIII RUH_5875 HCB, GEIH_2000 HCB | ||
| Acinetobacter baylyi | Gram-, Strictly aerobic, nonfermentative, bacilli | 1 | Yes | DSM 14959 DSM, DSM 14961T DSM, DSM 14963 DSM | ||||
| Acinetobacter beijerinckii | Gram-, Strictly aerobic, nonfermentative, bacilli | 1 | No | |||||
| Acinetobacter bereziniae | Gram-, Strictly aerobic, nonfermentative, bacilli | 1 | No | |||||
| Acinetobacter bouvetii | Gram-, Strictly aerobic, nonfermentative, bacilli | 1 | Yes | DSM 14964T DSM | ||||
| Acinetobacter brisouii | Gram-, Strictly aerobic, nonfermentative, bacilli | 1 | No | |||||
| Acinetobacter calcoaceticus | Gram-, Strictly aerobic, nonfermentative, bacilli | Skin and throat normal flora | 1 | Yes | 28 PIM, B388 UFL, CCM 4503 CCM, CCM 4665 CCM, DSM 1139 DSM, DSM 30006T HAM | |||
| Acinetobacter gerneri | Gram-, Strictly aerobic, nonfermentative, bacilli | 1 | Yes | DSM 14967T HAM | ||||
| Acinetobacter guillouiae | Gram-, Strictly aerobic, nonfermentative, bacilli | Yes | DSM 590 DSM | |||||
| Acinetobacter gyllenbergii | Gram-, Strictly aerobic, nonfermentative, bacilli | No | ||||||
| Acinetobacter haemolyticus | rarely a human pathogen | Gram-, Strictly aerobic, nonfermentative, bacilli | Sputum | 2 | Yes | DSM 6962T DSM, LMG 1033 HAM | SMI A058 SMI | |
| Acinetobacter johnsonii | Gram-, Strictly aerobic, nonfermentative, bacilli | 2 | Yes | 10036669_102 USH, 2_1 TUB, 31 PIM, DSM 6963T DSM, DSM 6963T HAM, v773MCRF | ||||
| Acinetobacter junii | rarely a human pathogen | Gram-, Strictly aerobic, nonfermentative, bacilli | Urine | 2 | Yes | DSM 6964T HAM, DSM 1532 DSM, DSM 14968 HAM | ||
| Acinetobacter lwoffii | meningitis | Gram-, Strictly aerobic, nonfermentative, bacilli | Lungs and pharynx | 2 | Yes | LB_101249_09 ERL, 13 PIM, 2_Ring240 MHH, 54 PIM, B101 UFL, B138 UFL, DSM 2403T DSM, 11_0038419_001_01 LGL, V506 MCRF | ||
| Acinetobacter nosocomialis | Gram-, Strictly aerobic, nonfermentative, bacilli | 1 | Yes | AL_192 HCB, AL_212 HCB, AL_59 HCB, AL_73 HCB, AL_95 HCB | ||||
| Acinetobacter parvus | Otitis | Gram-, Strictly aerobic, nonfermentative, bacilli | ear | 2 | Yes | DSM 16617T HAM | ||
| Acinetobacter pitii | Gram-, Strictly aerobic, nonfermentative, bacilli | 1 | Yes | Serovar 1 DSM 9337 DSM, Serovar 13 DSM 9312 DSM, Serovar 18 DSM 9341 DSM, Serovar 2 DSM 9306 DSM, Serovar 21 DSM 9342 DSM, Serovar 22 DSM 9318 DSM, Serovar 24 DSM 9320 DSM, Serovar 25 DSM 9343 DSM, Serovar 26 DSM 9321 DSM, Serovar 3 DSM 9307 DSM, Serovar 4 DSM 9338 DSM, Serovar 7 DSM 9308 DSM, 14 HCB, 20 HCB, 21 HCB, 52 HCB, 60 HCB, 69 HCB | ||||
| Acinetobacter radioresistens | rarely a human pathogen | Gram-, Strictly aerobic, nonfermentative, bacilli | Soil | 1 | Yes | LMG 10614 HAM, DSM 6976T HAM, B381 UFL | ||
| Acinetobacter rudis | Gram-, Strictly aerobic, nonfermentative, bacilli | 1 | No | |||||
| Acinetobacter schindleri | rarely a human pathogen | Gram- coccobacilli, Strictly aerobic, nonfermentative, bacilli | 2 | Yes | DSM 16038T DSM | |||
| Acinetobacter soli | Gram-, Strictly aerobic, nonfermentative, bacilli | Soil | 1 | No | ||||
| Acinetobacter sp | Gram-, Strictly aerobic, nonfermentative, bacilli | Yes | DSM 46612 DSM, DSM 11042 DSM, DSM 11652 DSM, DSM 30009 DSM | |||||
| Acinetobacter tandoii | Gram-, Strictly aerobic, nonfermentative, bacilli | 1 | Yes | DSM 14970T HAM | ||||
| Acinetobacter tjernbergiae | Gram-, Strictly aerobic, nonfermentative, bacilli | 1 | Yes | DSM 14971T HAM, DSM 14966 DSM | ||||
| Acinetobacter towneri | Gram-, Strictly aerobic, nonfermentative, bacilli | 1 | Yes | DSM 14969 DSM, DSM 14962T HAM | ||||
| Acinetobacter ursingii | endocarditis | Gram-, Strictly aerobic, nonfermentative, bacilli | Opportunistic infects seriously ill patients | 2 | Yes | 477 RLT, DSM 16037T HAM | ||
| Acinetobacter venetianus | Gram-, Strictly aerobic, nonfermentative, bacilli | Seawater | 1 | No | ||||
| Actinobacillus anseriformium | Gram- oval to rod shaped, facultatively aerobic or anaerobic | 2 | No | |||||
| Actinobacillus arthritidis | Arthrithis in animals | Gram- oval to rod shaped, facultatively aerobic or anaerobic | horse joint | 2 | No | |||
| Actinobacillus capsulatus | Gram- oval to rod shaped, facultatively aerobic or anaerobic | rabbit pharinx | 2 | No | ||||
| Actinobacillus delphinicola | Gram- oval to rod shaped, facultatively aerobic or anaerobic | dolphin lung | 2 | Yes | DSM 11374T DSM | |||
| Actinobacillus equuli | Septicemia in horses | Gram- oval to rod shaped, facultatively aerobic or anaerobic | Horse blood | 2 | No | |||
| Actinobacillus equuli ssp equuli | Gram- oval to rod shaped, facultatively aerobic or anaerobic | 2 | Yes | DSM 19655T DSM | ||||
| Actinobacillus equuli ssp haemolyticus | Gram- oval to rod shaped, facultatively aerobic or anaerobic | 2 | No | |||||
| Actinobacillus hominis | Gram- oval to rod shaped, facultatively aerobic or anaerobic | 2 | No | |||||
| Actinobacillus indolicus | Gram- oval to rod shaped, facultatively aerobic or anaerobic | 2 | No | |||||
| Actinobacillus lignieresii | Gram- oval to rod shaped, facultatively aerobic or anaerobic | animal tissue | 2 | Yes | DSM 19770 DSM | |||
| Actinobacillus minor | Gram- oval to rod shaped, facultatively aerobic or anaerobic | 2 | No | |||||
| Actinobacillus muris | pneumonia in mice | Gram- oval to rod shaped, facultatively aerobic or anaerobic | mouse pharinx | 2 | No | |||
| Actinobacillus pleuropneumoniae | pneumonia in animals | Gram- oval to rod shaped, facultatively aerobic or anaerobic | animal lungs | 2 | Yes | 351 LAL, DSM 13472T DSM | ||
| Actinobacillus porcinus | Gram- oval to rod shaped, facultatively aerobic or anaerobic | 2 | No | |||||
| Actinobacillus rossii | Gram- oval to rod shaped, facultatively aerobic or anaerobic | sow urogenital tract | 2 | Yes | DSM 17479T DSM | |||
| Actinobacillus scotiae | Gram- oval to rod shaped, facultatively aerobic or anaerobic | 2 | No | |||||
| Actinobacillus seminis | Gram- oval to rod shaped, facultatively aerobic or anaerobic | Animal semen | 2 | No | ||||
| Actinobacillus succinogenes | Gram- oval to rod shaped, facultatively aerobic or anaerobic | rumen of cattle | 1 | No | ||||
| Actinobacillus suis | Gram- oval to rod shaped, facultatively aerobic or anaerobic | animal blood | 2 | Yes | DSM 19774 DSM, GD75 GDD | |||
| Actinobacillus ureae | Gram- oval to rod shaped, facultatively aerobic or anaerobic | nose swab | 2 | Yes | DSM 5568T DSM | |||
| Actinobaculum massiliense | Gram+ facultative anaerobic coccoid rod | 1 | No | |||||
| Actinobaculum schaalii | Urosepsis | Gram+ facultative anaerobic coccoid rod | 2 | Yes | DSM 15541T DSM, RV_BA1_032010_E LBK, 70710715001 MVC | |||
| Actinobaculum suis | Actinomycosis of the swine mammary gland | Gram+ facultative anaerobic coccoid rod | Swine | 2 | Yes | DSM 20639T DSM | ||
| Actinobaculum urinale | Urosepsis | Gram+ facultative anaerobic coccoid rod | urine | 2 | Yes | DSM 15805T DSM | ||
| Actinocorallia aurantiaca | Gram+ | Soil | 1 | No | ||||
| Actinocorallia aurea | Gram+ | Soil | 1 | No | ||||
| Actinocorallia cavernae | Gram+ | Soil | 1 | No | ||||
| Actinocorallia glomerata | Gram+ | Soil | 1 | No | ||||
| Actinocorallia herbida | Gram+ | Soil | 1 | No | ||||
| Actinocorallia libanotica | Gram+ | Soil | 1 | Yes | B246 UFL | |||
| Actinocorallia longicatena | Gram+ | Soil | 1 | No | ||||
| Actinomyces bovis | Actinomycosis in cattle and sheep | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | 2 | Yes | DSM 43014T DSM | |||
| Actinomyces bowdenii | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | null | 2 | Yes | DSM 15435T DSM | |||
| Actinomyces canis | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | null | 2 | Yes | DSM 15536T DSM | |||
| Actinomyces cardiffensis | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | null | 2 | Yes | DSM 15803T DSM | |||
| Actinomyces catuli | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | null | 2 | Yes | DSM 15415T DSM | |||
| Actinomyces coleocanis | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | null | 2 | Yes | DSM 15436T DSM | |||
| Actinomyces dentalis | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | mouth | 2 | Yes | DSM 19115T DSM | |||
| Actinomyces denticolens | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | Mouth | 2 | Yes | DSM 20671T DSM | |||
| Actinomyces europaeus | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | human tissue samples | 1 | Yes | DSM 11078 DSM, DSM 11077 DSM, DSM 11076 DSM | |||
| Actinomyces funkei | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | null | 2 | Yes | DSM 15537T DSM | |||
| Actinomyces georgiae | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | mouth | 2 | No | ||||
| Actinomyces gerencseriae | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | Parotid abscess | 2 | Yes | DSM 6844T DSM | |||
| Actinomyces graevenitzii | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | null | 2 | Yes | DSM 15540T DSM, P9flue_1_7_1aer USH, P4bue_re2AN USH | |||
| Actinomyces hominis | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | 2 | No | |||||
| Actinomyces hongkongensis | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | 2 | No | |||||
| Actinomyces hordeovulneris | Abscess, pleuritis and systemic infections in dogs | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | canine ascites fluid | 2 | Yes | DSM 20732T DSM | ||
| Actinomyces howellii | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | 2 | No | |||||
| Actinomyces humiferus | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | soil | 2 | No | ||||
| Actinomyces hyovaginalis | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | swine urogenital tract | 2 | Yes | DSM 10695T DSM | |||
| Actinomyces israelii | Actinomycosis, rarely becterial endocarditis | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | Urine and feces samples, mouth samples mucosal surfaces of vagina and rectum, soil samples, decaying organic matter | 2 | Yes | DSM 43323 DSM,DSM 43320T DSM, DSM 43011 DSM | ||
| Actinomyces johnsonii | null | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | mouth | 2 | No | |||
| Actinomyces marimammalium | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | null | 2 | Yes | DSM 15383T DSM | |||
| Actinomyces massiliensis | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | null | 2 | No | ||||
| Actinomyces meyeri | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | Infected wounds | 2 | Yes | VA390_10 ERL, IBS_MS_5 IBS, DSM 20733T DSM, 61356 PNU, P10flue_li3AN USH | |||
| Actinomyces naeslundii | Caries and periodontal disease | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | Mouth samples, female genital tract | 2 | Yes | DSM 43013T DSM, DSM 17233 DSM | ||
| Actinomyces nasicola | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | null | 2 | Yes | DSM 19116T DSM | |||
| Actinomyces naturae | null | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | null | 2 | Yes | VA201_10 ERL | ||
| Actinomyces neuii | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | null | 2 | Yes | 50_90 IBS, B17945_03 IBS, 461 RLT, 475 RLT | |||
| Actinomyces neuii ssp anitratus | null | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | null | 2 | Yes | 121 RLT, DSM 8577T DSM | ||
| Actinomyces neuii ssp neuii | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | 2 | Yes | DSM 8576T DSM, 471 RLT | ||||
| Actinomyces odontolyticus | Caries and periodontal disease | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | Mouth samples | 2 | Yes | 87 PIM, DSM 43331 DSM, DSM 19120T DSM, 100617_01 PNU, 110324_101 PNU, 110324_25 PNU, 110706_K6 LUMC, 1A12041127_4e MVD, 1A12072410_3e MVD, 473 RLT, P10bue_li1aer USH, P3flue_li10AN USH, P9bue_1_7_7aer USH, 100617_49 PNU 2 | ||
| Actinomyces oricola | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | 2 | No | |||||
| Actinomyces oris | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | Sputum | 2 | Yes | 1A12082242_1e MVD, BK03176_10 ERL, Cory_54 IBS, Cory_83 IBS, Cory_84 IBS, P5flue35_3aer USH, P5flue35_4aer USH, P5flue35_5aer USH, BK495_10 ERL | |||
| Actinomyces radicidentis | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | null | 2 | Yes | DSM 15433T DSM | |||
| Actinomyces radingae | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | null | 2 | Yes | DSM 9169T DSM, 202 RLT, 343 RTL | |||
| Actinomyces ruminicola | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | null | 2 | Yes | CIP 109388T CIP | |||
| Actinomyces slackii | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | mouth | 2 | No | ||||
| Actinomyces sp | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | null | 2 | Yes | VA_01434_2_09 ERL, G4892 IBS, UGV 2298 UGV, UGV 4321 UGV | |||
| Actinomyces suimastitidis | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | null | 2 | Yes | DSM 15538T DSM | |||
| Actinomyces timonensis | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | 2 | No | |||||
| Actinomyces turicensis | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | feces, perianal abscess | 2 | Yes | DSM 9168T DSM, 23346_1a HDI | |||
| Actinomyces urogenitalis | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | Urine, urethra, vaginal secretion | 2 | Yes | VA00144_08 ERL, DSM 15434T DSM | |||
| Actinomyces vaccimaxillae | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | null | 2 | Yes | DSM15804T DSM | |||
| Actinomyces viscosus | Peridontal disease in hamsters and opportunistic infections in dogs | Anaerobe Gram+ rods (clusters form "hyphae-like" structures) | 2 | Yes | DSM 43327T DSM | |||
| Adlercreutzia equolifaciens | Obligate anaerobe, non-spore forming, non-motile, Gram+ coccobacilli | Feces | 1 | Yes | DSM 19450T DSM | |||
| Aerococcus christensenii | Gram+ cocci aerobic | air, skin, urgogenital tract | 2 | Yes | DSM 15819T DSM | |||
| Aerococcus sanguinicola | bacteremia and septicemia | Gram+ cocci aerobic | air, skin, blood | 2 | Yes | 995100567 LBK, DSM 15633T DSM, UR_01084b_09 ERL | ||
| Aerococcus suis | Gram+ cocci aerobic | air, swine samples | 1 | No | ||||
| Aerococcus urinae | Urinary tract infections | Gram+ cocci aerobic | air, Urine | 2 | Yes | 0424_0481_FEB IBS, 3_Typ528 MHH, IBS_MS_14 IBS, DSM 7446T DSM, 992000245 LBK, 81 PIM, UR4955_09 ERL | ||
| Aerococcus urinaeequi | Gram+ cocci aerobic | air,Horse urine | 1 | No | ||||
| Aerococcus urinaehominis | Gram+ cocci aerobic | air, Urine | 2 | Yes | DSM 15634T DSM | |||
| Aerococcus viridans | Septicemia in lobster | Gram+ cocci aerobic | air, lobster | 1 | Yes | CCM 1911 CCM, CCM 1914T CCM, CCM 1915 CCM, CCM 2439 CCM, DSM 20311 DSM, DSM 20340T DSM | ||
| Aeromicrobium alkaliterrae | Gram+ | No | ||||||
| Aeromicrobium erythreum | Gram+ | No | ||||||
| Aeromicrobium fastidiosum | Gram+ | No | ||||||
| Aeromicrobium flavum | Gram+ | Yes | DSM 19355T DSM | |||||
| Aeromicrobium ginsengisoli | Gram+ | No | ||||||
| Aeromicrobium halocynthiae | Gram+ | No | ||||||
| Aeromicrobium marinum | Gram+ | No | ||||||
| Aeromicrobium massiliense | Gram+ | No | ||||||
| Aeromicrobium panaciterrae | Gram+ | No | ||||||
| Aeromicrobium ponti | Gram+ | No | ||||||
| Aeromicrobium tamlense | Gram+ | No | ||||||
| Aeromonas allosaccharophila | Gram- facultative anaerobic, rod shaped | feces | 2 | No | ||||
| Aeromonas aquariorum | Gram- facultative anaerobic, rod shaped | water | 1 | No | ||||
| Aeromonas bestiarum | Septicemia in fish | Gram- facultative anaerobic, rod shaped | fish, food, eggs | 1 | Yes | CECT 4227T DSM, DSM 13956T HAM | ||
| Aeromonas bivalvium | Gram- facultative anaerobic, rod shaped | water | 1 | No | ||||
| Aeromonas caviae | Diarrhea | Gram- facultative anaerobic, rod shaped | water | 1 | Yes | 60 PIM, CECT 838T DSM, DSM 7323T HAM | Synonym A. puncata ssp caviae | |
| Aeromonas diversa | Gram- facultative anaerobic, rod shaped | Wound | 2 | No | ||||
| Aeromonas encheleia | Gram- facultative anaerobic, rod shaped | eel | 1 | Yes | CECT 4342T DSM, DSM 11577T HAM | |||
| Aeromonas enteropelogenes | Gram- facultative anaerobic, rod shaped | feces, appendix | 1 | Yes | DSM 6394T DSM, DSM 7312 DSM, DSM 9381 DSM | |||
| Aeromonas eucrenophila | Gram- facultative anaerobic, rod shaped | Water, fish | 1 | Yes | DSM 17534T HAM, CECT 4224T DSM | |||
| Aeromonas fluvialis | Gram- facultative anaerobic, rod shaped | Water | 1 | No | ||||
| Aeromonas hydrophila | Gram- facultative anaerobic, rod shaped | fish, food, eggs | 2 | Yes | CECT 839T DSM | |||
| Aeromonas hydrophila ssp anaerogenes | Gram- facultative anaerobic, rod shaped | fish, food, eggs | 2 | Yes | DSM 30188T HAM | |||
| Aeromonas hydrophila ssp dhakensis | Gram- facultative anaerobic, rod shaped | fish, food, eggs | 2 | No | ||||
| Aeromonas hydrophila ssp hydrophila | Gram- facultative anaerobic, rod shaped | fish, food, eggs | 2 | Yes | DSM 30187T DSM | |||
| Aeromonas hydrophila ssp ranae | Gram- facultative anaerobic, rod shaped | fish, food, eggs | 2 | Yes | LMG 19707T HAM | |||
| Aeromonas ichthiosmia | Gram- facultative anaerobic, rod shaped | insect larvae | 2 | Yes | DSM 6393T HAM | |||
| Aeromonas jandaei | Gastroenteritis wound and eye infetions | Gram- facultative anaerobic, rod shaped | feces, blood, eyes, wounds, shellfish | 1 | Yes | CECT 4228T DSM, DSM 7311T HAM | ||
| Aeromonas media | Gram- facultative anaerobic, rod shaped | fish, water | 1 | Yes | ST_00655_09 ERL, CECT 4232T DSM, DSM 4881T HAM, ST_02485_08 ERL | |||
| Aeromonas molluscorum | Gram- facultative anaerobic, rod shaped | Shellfish | 1 | Yes | DSM 17090T HAM, 848T DSM | |||
| Aeromonas piscicola | Gram- facultative anaerobic, rod shaped | fish | 1 | No | ||||
| Aeromonas popoffii | urinary tract infections | Gram- facultative anaerobic, rod shaped | Urogenital tract, urine | 1 | Yes | LMG 17541T HAM | ||
| Aeromonas punctata | gastroenteritis | Gram- facultative anaerobic, rod shaped | water | 2 | No | |||
| Aeromonas punctata ssp caviae | gastroenteritis | Gram- facultative anaerobic, rod shaped | water | 2 | Yes | LMG 3773 HAM | ||
| Aeromonas punctata ssp punctata | gastroenteritis | Gram- facultative anaerobic, rod shaped | water | 2 | No | |||
| Aeromonas rivuli | Gram- facultative anaerobic, rod shaped | water | 1 | No | ||||
| Aeromonas salmonicida | Gram- facultative anaerobic, rod shaped | fish, trout | 1 | No | ||||
| Aeromonas salmonicida ssp achromogenes | Gram- facultative anaerobic, rod shaped | fish, trout | 1 | No | ||||
| Aeromonas salmonicida ssp masoucida | Gram- facultative anaerobic, rod shaped | fish, trout | 1 | Yes | LMG 3782T HAM | |||
| Aeromonas salmonicida ssp pectinolytica | Gram- facultative anaerobic, rod shaped | fish, trout | 1 | Yes | DSM 12609T HAM | |||
| Aeromonas salmonicida ssp salmonicida | Gram- facultative anaerobic, rod shaped | fish, trout | 1 | Yes | CCM 1307 CCM, CECT 894T DSM, LMG 3780T HAM | |||
| Aeromonas salmonicida ssp smithia | Gram- facultative anaerobic, rod shaped | fish, trout | 1 | No | ||||
| Aeromonas sanerellii | Gram- facultative anaerobic, rod shaped | wounds | 2 | No | ||||
| Aeromonas schubertii | Gram- facultative anaerobic, rod shaped | skin, abscess | 1 | Yes | CECT 4240T DSM, DSM 4882T HAM | |||
| Aeromonas sharmana | Gram- facultative anaerobic, rod shaped | 1 | No | |||||
| Aeromonas simiae | Gram- facultative anaerobic, rod shaped | 1 | Yes | DSM 16559T HAM | ||||
| Aeromonas sobria | Gram- facultative anaerobic, rod shaped | sludge | 1 | Yes | CECT 4245T DSM, LMG 3783T HAM | |||
| Aeromonas sp[2] | Gram- facultative anaerobic, rod shaped | Yes | VA_12051_09 ERL | |||||
| Aeromonas taiwanensis | Gram- facultative anaerobic, rod shaped | wounds | 2 | No | ||||
| Aeromonas tecta | Gram- facultative anaerobic, rod shaped | water | 1 | No | ||||
| Aeromonas veronii | Wound Infection, bacteremia, septicemia, diarreha | Gram- facultative anaerobic, rod shaped | wounds, blood, feces, sputum | 2 | Yes | 0807M090438 IBS, CECT 4199T DSM, CECT 4257T DSM, CECT 5761T DSM, DSM 11576T HAM, DSM 17676 HAM, DSM 7386T HAM | ||
| Afipia broomeae | Gram- bacilli | Yes | DSM 7327T DSM | |||||
| Afipia felis | Gram- bacilli | Yes | DSM 16694 DSM, DSM 7326T DSM | |||||
| Afipia massiliensis | Gram- bacilli | Yes | DSM 17498T DSM | |||||
| Aggregatibacter actinomycetemcomitans | Caries and periodontal disease | Gram-, facultative non-motile rods | throat, mouth | 2 | Yes | CCM 4688T CCM, CCM 6053 CCM, DSM 11122 DSM, DSM 11123 DSM, DSM 8324T DSM | ||
| Aggregatibacter aphrophilus | endocarditis | Gram-, facultative non-motile rods | blood, mucosal surfaces | 2 | Yes | 100409_01 MCU, 100409_02 MCU,RV BRL | ||
| Aggregatibacter segnis | Caries and periodontal disease | Gram-, facultative non-motile rods | mouth | 2 | Yes | DSM 21418T DSM, VA13748_09 ERL | ||
| Agrococcus baldri | Aerobic, Gram+, coryneform | Soil, environment | 1 | No | ||||
| Agrococcus carbonis | Aerobic, Gram+, coryneform | Soil, environment | 1 | No | ||||
| Agrococcus casei | Aerobic, Gram+, coryneform | Soil, environment, cheese | 1 | No | ||||
| Agrococcus citreus | Aerobic, Gram+, coryneform | Soil, environment | 1 | No | ||||
| Agrococcus jejuensis | Aerobic, Gram+, coryneform | Soil, environment | 1 | No | ||||
| Agrococcus jenensis | Aerobic, Gram+, coryneform | Soil, environment | 1 | Yes | DSM 9580T DSM, DSM 9996 DSM | |||
| Agrococcus lahaulensis | Aerobic, Gram+, coryneform | Soil, environment | 1 | No | ||||
| Agrococcus terreus | Aerobic, Gram+, coryneform | Soil, environment | 1 | No | ||||
| Agrococcus versicolor | Aerobic, Gram+, coryneform | Soil, environment | 1 | No | ||||
| Agromyces albus | Aerobic, Gram+, coccoid to irregular cells | Soil, environment | 1 | No | ||||
| Agromyces allii | Aerobic, Gram+, coccoid to irregular cells | Soil, environment | 1 | No | ||||
| Agromyces atrinae | Aerobic, Gram+, coccoid to irregular cells | Soil, environment | 1 | No | ||||
| Agromyces aurantiacus | Aerobic, Gram+, coccoid to irregular cells | Soil, environment | 1 | No | ||||
| Agromyces bauzanensis | Aerobic, Gram+, coccoid to irregular cells | Soil, environment | 1 | No | ||||
| Agromyces bracchium | Aerobic, Gram+, coccoid to irregular cells | Soil, environment | 1 | Yes | HKI 303 DSM 14596T HKJ | |||
| Agromyces cerinus ssp cerinus | Aerobic, Gram+, coccoid to irregular cells | Soil, environment | 1 | Yes | HKI 11525_DSM 8595T HKJ | |||
| Agromyces cerinus ssp nitratus | Aerobic, Gram+, coccoid to irregular cells | Soil, environment | 1 | Yes | HKI 11532_DSM 8596T HKJ | |||
| Agromyces flavus | Aerobic, Gram+, coccoid to irregular cells | Soil, environment | 1 | No | ||||
| Agromyces fucosus | Aerobic, Gram+, coccoid to irregular cells | Soil, environment | 1 | Yes | HKI 11529_DSM 8597T HKJ | |||
| Agromyces hippuratus | Aerobic, Gram+, coccoid to irregular cells | Soil, environment | 1 | Yes | HKI 11533_DSM 8598T HKJ | |||
| Agromyces humatus | Aerobic, Gram+, coccoid to irregular cells | Soil, environment | 1 | Yes | HKI 327 HKJ | |||
| Agromyces italicus | Aerobic, Gram+, coccoid to irregular cells | Soil, environment | 1 | Yes | HKI 325_DSM 16388T HKJ | |||
| Agromyces lapidis | Aerobic, Gram+, coccoid to irregular cells | Soil, environment | 1 | Yes | HKI 324 HKJ | |||
| Agromyces luteolus | Aerobic, Gram+, coccoid to irregular cells | Soil, environment | 1 | No | ||||
| Agromyces mediolanus | Aerobic, Gram+, coccoid to irregular cells | Soil, environment | 1 | Yes | DSM 20152T DSM, HKI 108_DSM 20152T HKJ, HKI 308 HKJ | |||
| Agromyces neolithicus | Aerobic, Gram+, coccoid to irregular cells | Soil, environment | 1 | Yes | HKI 321 HKJ | |||
| Agromyces ramosus | Aerobic, Gram+, coccoid to irregular cells | Soil, environment | 1 | No | ||||
| Agromyces rhizospherae | Aerobic, Gram+, coccoid to irregular cells | Soil, environment | 1 | Yes | HKI 302_DSM 14597T HKJ | |||
| Agromyces salentinus | Aerobic, Gram+, coccoid to irregular cells | Soil, environment | 1 | Yes | HKI 320_DSM 16198T HKJ | |||
| Agromyces soli | Aerobic, Gram+, coccoid to irregular cells | Soil, environment | 1 | No | ||||
| Agromyces subbeticus | Aerobic, Gram+, coccoid to irregular cells | Soil, environment | 1 | Yes | HKI 340_DSM 16689T HKJ | |||
| Agromyces terrus | Aerobic, Gram+, coccoid to irregular cells | Soil, environment | 1 | No | ||||
| Agromyces tropicus | Aerobic, Gram+, coccoid to irregular cells | Soil, environment | 1 | No | ||||
| Agromyces ulmi | Aerobic, Gram+, coccoid to irregular cells | Soil, environment | 1 | No | ||||
| Alcaligenes aquatilis | Gram-, obligate aerobic, rod shaped, motile | water | 1 | No | ||||
| Alcaligenes faecalis | Opportunistic urinary tract infections | Gram-, obligate aerobic, rod shaped, motile | feces, urine | 1 | Yes | DSM 13644 DSM | ||
| Alcaligenes faecalis ssp faecalis | Opportunistic urinary tract infections | Gram-, obligate aerobic, rod shaped, motile | feces, urine | 1 | Yes | 052_NF24 NFI, DSM 2576 DSM, DSM 30030T DSM, DSM 30030T HAM, DSM 30033 DSM, DSM 6174 DSM | ||
| Alcaligenes faecalis ssp parafaecalis | Opportunistic urinary tract infections | Gram-, obligate aerobic, rod shaped, motile | feces, urine | 1 | Yes | DSM 13975T DSM, DSM 13975T HAM | ||
| Alcaligenes faecalis ssp phenolicus | Opportunistic urinary tract infections | Gram-, obligate aerobic, rod shaped, motile | feces, urine | 1 | Yes | DSM 16503T DSM | ||
| Alcaligenes sp | Gram-, obligate aerobic, rod shaped, motile | 1 | Yes | 091029_c SLT | ||||
| Alicyclobacillus acidiphilus | Gram+, rods, spore forming, frow in acidic conditions. | Soil | 1 | Yes | DSM 14558T DSM | |||
| Alicyclobacillus acidocaldarius | Gram+, rods, spore forming, frow in acidic conditions. | Soil | 1 | No | ||||
| Alicyclobacillus acidocaldarius ssp acidocaldarius | Gram+, rods, spore forming, frow in acidic conditions. | Soil | 1 | Yes | DSM 452 DSM, DSM 446T DSM | |||
| Alicyclobacillus acidocaldarius ssp rittmannii | Gram+, rods, spore forming, frow in acidic conditions. | Soil | 1 | Yes | DSM 11297T DSM | |||
| Alicyclobacillus acidoterrestris | Gram+, rods, spore forming, frow in acidic conditions. | Soil | 1 | Yes | DSM 2498 DSM, DSM 3924 DSM, DSM 3922T DSM | |||
| Alicyclobacillus aeris | Gram+, rods, spore forming, frow in acidic conditions. | Soil | 1 | No | ||||
| Alicyclobacillus consociatus | Gram+, rods, spore forming, frow in acidic conditions. | Soil | 1 | No | ||||
| Alicyclobacillus contaminans | Gram+, rods, spore forming, frow in acidic conditions. | Soil | 1 | Yes | DSM 17975T DSM | |||
| Alicyclobacillus cycloheptanicus | Gram+, rods, spore forming, frow in acidic conditions. | Soil | 1 | Yes | DSM 4005DSM, DSM 4006T DSM, DSM 4007 DSM | |||
| Alicyclobacillus disulfidooxidans | Gram+, rods, spore forming, frow in acidic conditions. | Soil | 1 | No | ||||
| Alicyclobacillus fastidiosus | Gram+, rods, spore forming, frow in acidic conditions. | Soil | 1 | Yes | DSM 17978T DSM | |||
| Alicyclobacillus ferrooxydans | Gram+, rods, spore forming, frow in acidic conditions. | Soil | 1 | No | ||||
| Alicyclobacillus herbarius | Gram+, rods, spore forming, frow in acidic conditions. | Soil | 1 | Yes | DSM 13609T DSM | |||
| Alicyclobacillus hesperidum | Gram+, rods, spore forming, frow in acidic conditions. | Soil | 1 | Yes | DSM 12489T DSM, DSM 12766 DSM | |||
| Alicyclobacillus kakegawensis | Gram+, rods, spore forming, frow in acidic conditions. | Soil | 1 | No | ||||
| Alicyclobacillus macrosporangiidus | Gram+, rods, spore forming, frow in acidic conditions. | Soil | 1 | Yes | DSM 17980T DSM | |||
| Alicyclobacillus pohliae | Gram+, rods, spore forming, frow in acidic conditions. | Soil | 1 | No | ||||
| Alicyclobacillus pomorum | Gram+, rods, spore forming, frow in acidic conditions. | Soil | 1 | Yes | DSM 14955T DSM | |||
| Alicyclobacillus sacchari | Gram+, rods, spore forming, frow in acidic conditions. | Soil | 1 | Yes | DSM 17974T DSM | |||
| Alicyclobacillus sendaiensis | Gram+, rods, spore forming, frow in acidic conditions. | Soil | 1 | Yes | DSM 17614T DSM | |||
| Alicyclobacillus shizuokensis | Gram+, rods, spore forming, frow in acidic conditions. | Soil | 1 | Yes | DSM 17981T DSM | |||
| Alicyclobacillus tolerans | Gram+, rods, spore forming, frow in acidic conditions. | Soil | 1 | No | ||||
| Alicyclobacillus vulcanalis | Gram+, rods, spore forming, frow in acidic conditions. | Soil | 1 | Yes | DSM 16176T DSM | |||
| Aliivibrio finisterrensis | Gram-, rod shaped, motile | clams | 1 | No | ||||
| Aliivibrio fischeri | Gram-, rod shaped, motile | Water, fish | 1 | Yes | DSM 2168 DSM, DSM 507T DSM, DSM 7151 DSM | |||
| Aliivibrio logei | Gram-, rod shaped, motile | Water, fish | 1 | No | ||||
| Aliivibrio salmonicida | Fish pathogen | Gram-, rod shaped, motile | fish | 1 | No | |||
| Aliivibrio sifiae | Gram-, rod shaped, motile | Water, fish | 1 | No | ||||
| Aliivibrio wodanis | Gram-, rod shaped, motile | Water, fish | 1 | No | ||||
| Alishewanella aestuarii | Gram-, round cells, motile, catalase and oxidase positive | water | 1 | No | ||||
| Alishewanella agri | Gram-, round cells, motile, catalase and oxidase positive | Soil | 1 | No | ||||
| Alishewanella fetalis | Gram-, round cells, motile, catalase and oxidase positive | Soil, human fetus | 1 | Yes | DSM 16032T HAM | |||
| Alishewanella jeotgali | Gram-, round cells, motile, catalase and oxidase positive | Soil | 1 | No | ||||
| Alistipes finegoldii | Gram-, strictly anaerobic, pigment producing rod shaped | human tissue samples | 2 | Yes | DSM 17242T DSM | |||
| Alistipes indistinctus | Gram-, strictly anaerobic, pigment producing rod shaped | human tissue samples | 2 | No | ||||
| Alistipes onderdonkii | Gram-, strictly anaerobic, pigment producing rod shaped | human tissue samples | 2 | Yes | 18 RLT, DSM 19147T DSM | |||
| Alistipes putrdinis | Gram-, strictly anaerobic, pigment producing rod shaped | human tissue samples | 2 | No | ||||
| Alistipes shahii | Gram-, strictly anaerobic, pigment producing rod shaped | human tissue samples | 2 | Yes | DSM 19121T DSM | |||
| Alkalibacillus filiformis | Gram+ strictly aerobic, spore bearing rod shaped | soil | 1 | No | ||||
| Alkalibacillus flavidus | Gram+ strictly aerobic, spore bearing rod shaped | soil | 1 | No | ||||
| Alkalibacillus haloalkaliphilus | Gram+ strictly aerobic, spore bearing rod shaped | soil | 1 | Yes | DSM 5271T DSM | |||
| Alkalibacillus halophilus | Gram+ strictly aerobic, spore bearing rod shaped | soil | 1 | No | ||||
| Alkalibacillus salilacus | Gram+ strictly aerobic, spore bearing rod shaped | water, soil | 1 | No | ||||
| Alkalibacillus silvisoli | Gram+ strictly aerobic, spore bearing rod shaped | soil | 1 | No | ||||
| Alkalibacillus weihaiensis | Gram+ strictly aerobic, spore bearing rod shaped | Soil | 1 | No | ||||
| Alloiococcus otitis | Acute otitis media | Gram+, aerobic, clustered | ear swab of humans and animals | 2 | Yes | DSM 7252T DSM, POS 3007 BDU, POS 3015 BDU | ||
| Alloscardovia omnicolens | Gram+, Irregularly shaped rods, aerobic | Blood, urine, oral cavity, tonsils | 2 | Yes | DSM 21503T DSM, VA20903_2_10 ERL | |||
| Alternaria alternata | Cases leaf spots and upper respiratory tract infections | Fungus | Respiratory tract | Yes | RV07_02 22 VML | |||
| Amycolatopsis alba | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | Yes | DSM 44262T DSM | ||||
| Amycolatopsis albidoflavus | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis australiensis | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis azurea | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | Yes | DSM 43854T DSM | ||||
| Amycolatopsis balhimycina | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | Yes | DSM 44591T DSM | ||||
| Amycolatopsis benzoatilytica | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis circi | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis coloradensis | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | Yes | DSM 44225T DSM | ||||
| Amycolatopsis decaplanina | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis echigonensis | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis equina | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis eurytherma | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis fastidiosa | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | Yes | DSM 43855T DSM | |||||
| Amycolatopsis halophila | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis halotolerans | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis helveola | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis hippodromi | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis japonica | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | Yes | DSM 44213T DSM | ||||
| Amycolatopsis jejuensis | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis kentuckyensis | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | equine placenta | 1 | Yes | DSM 44652T DSM | |||
| Amycolatopsis keratiniphila ssp keratiniphila | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | Yes | DSM 44409T DSM | ||||
| Amycolatopsis lexingtonensis | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | equine placenta | 1 | Yes | DSM 44653T DSM | |||
| Amycolatopsis lurida | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | Yes | DSM 43134T DSM | ||||
| Amycolatopsis marina | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis mediterranei | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | Yes | DSM 40773 DSM, DSM 43304T DSM | ||||
| Amycolatopsis methanolica | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis minnesotensis | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | Yes | DSM 44988T DSM | ||||
| Amycolatopsis nigrescens | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis niigatensis | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis orientalis | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis palatopharyngis | Putative pathogen | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | Respiratory tract | 1 | No | |||
| Amycolatopsis pigmentata | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis plumensis | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis pretoriensis | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | equine placenta | 1 | Yes | DSM 44654T DSM | |||
| Amycolatopsis regifaucium | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis rifampicinica | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis rubida | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis saalfeldensis | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis sacchari | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis salitolerans | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis samaneae | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis sulphurea | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | Yes | DSM 46092T DSM | ||||
| Amycolatopsis tahailandensis | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis taiwanensis | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis thermoflava | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis thermophila | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis tolypomycina | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | Yes | DSM 44544T DSM | ||||
| Amycolatopsis tucumanensis | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis ultiminotia | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis vancoresmycina | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis viridis | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Amycolatopsis xylanica | Gram+, non-acid-fast, non-motile actinomycetes that form branched vegetative hyphae, undergo fragmentation into rod-like and squarish elements | 1 | No | |||||
| Anaerobiospirillum succiniciproducens | May cause bacteremia | Gram-, anaerobe | Intestinal gut | 2 | Yes | DLSAS001 DLS | ||
| Anaerobiospirillum thomasii | Gram-, anaerobe | 2 | No | |||||
| Anaerococcus hydrogenalis | Anaerobic, cocci, Gram+ | feces | 1 | Yes | DSM 7454T DSM, 110706_C2 LUMC | |||
| Anaerococcus lactolyticus | Anaerobic, cocci, Gram+ | vaginal discharge | 1 | Yes | DSM 7456T DSM | |||
| Anaerococcus murdochii | Anaerobic, cocci, Gram+ | skin ulcer | 2 | Yes | DSM 21462T DSM | |||
| Anaerococcus octavius | Anaerobic, cocci, Gram+ | 1 | Yes | DSM 10024 DSM, DSM 11663T DSM | ||||
| Anaerococcus prevotii | Anaerobic, cocci, Gram+ | human plasma, skin | 1 | Yes | DSM 20473 DSM, DSM 20548T DSM | |||
| Anaerococcus sp | Anaerobic, cocci, Gram+ | Yes | 58 RLT, HU43546_1 PNU, 110706_B9 LUMC | |||||
| Anaerococcus tetradius | Anaerobic, cocci, Gram+ | vagina | 1 | Yes | 123 RLT, DSM 2951T DSM | |||
| Anaerococcus vaginalis | Anaerobic, cocci, Gram+ | Urovaginal tract | 1 | Yes | DSM 7457T DSM | |||
| Anaerotruncus colihominis | Yes | 272 RLT | ||||||
| Anaplasma bovis | Beningn bovine rickettsiosis | Anaplasma, Gram- bacteria | 2 | No | ||||
| Anaplasma caudatum | infects with A. marginale | Anaplasma, Gram- bacteria | null | 2 | No | |||
| Anaplasma centrale | Mild form of anaplsmosis in cattle | Anaplasma, Gram- bacteria | null | 2 | No | |||
| Anaplasma marginale | Anaplsmosis in ruminants | Anaplasma, Gram- bacteria | null | 2 | No | |||
| Anaplasma ovis | Anaplsmosis in sheep | Anaplasma, Gram- bacteria | null | 2 | No | |||
| Anaplasma phagocytophilum | Anaplsmosis in animals, human granulocytic anaplasmosis (tick borne) | Anaplasma, Gram- bacteria | Neutrophil obligate, blood samples, animal samples | 2 | No | |||
| Anaplasma platys | canine infectious cyclic thrombocytopenia | Anaplasma, Gram- bacteria | Canine blood | 2 | No | |||
| Aneurinibacillus aneurinilyticus | Gram+ sporeforming, motile, bacillus or coccobacillus | feces | 1 | Yes | DSM 5562T DSM | |||
| Aneurinibacillus danicus | Gram+ sporeforming, motile, bacillus or coccobacillus | 1 | No | |||||
| Aneurinibacillus migulanus | Gram+ sporeforming, motile, bacillus or coccobacillus | 1 | Yes | DSM 2895T DSM | ||||
| Aneurinibacillus terranovensis | Gram+ sporeforming, motile, bacillus or coccobacillus | 1 | No | |||||
| Aneurinibacillus thermoaerophilus | null | Gram+ sporeforming, motile, bacillus or coccobacillus | plants, soil | 1 | No | null | null | null |
| Aquincola tertiaricarbonis | Gram-, obligately aerobic, motile oxidase positive | water | 1 | Yes | CIP PAH, L108 PAH, L10T PAH | |||
| Arcanobacterium haemolyticum | Rare cause of pharyngitis, endocarditis and skin ulcers | Gram+ facultative anaerobic catalase neg, pleomorphic rods | farm animals | 2 | Yes | DSM 20595T DSM, Cory_87 IBS, Cory_90 IBS, DSM 20595T UGV, UGV 6879 UGV, UGV P3333 UGV | ||
| Arcanobacterium hippocoleae | Vaginitis in horses | Gram+ facultative anaerobic catalase neg, pleomorphic rods | Horse vagina | 2 | Yes | DSM 15539T DSM | ||
| Arcanobacterium phocae | Gram+ facultative anaerobic catalase neg, pleomorphic rods | 2 | Yes | DSM 10004 DSM, DSM 10002T DSM, DSM 10003 DSM, DSM 10002T UGV, UGV 2689 UGV, UGV 2878 UGV, UGV 2880 UGV, UGV 2883 UGV | ||||
| Arcanobacterium pluranimalium | Gram+ facultative anaerobic catalase neg, pleomorphic rods | lung abscesses in deer and liver abscesses, mastitis, endometritis, abortions and endocarditis in cattle | 2 | Yes | DSM 13483T UGV, DSM 13483T DSM | |||
| Arcanobacterium wilhelmae | Vaginal tract of Rhinoceros unicornis. | 2 | No | NO [BRU 7854] | ARCANOBACTERIUM WILHELMAE CVUAS 647 CVUAS, CVUAS 647 CVUAS | Further Information on MALDI-UP: http://maldi-up.ua-bw.de | ||
| Arcobacter butzleri | gastroenteritis, diarrhea | Gram-, spiral shaped | Feces | 2 | Yes | 347_98 NVU, 460_98 NVU, DSM 7301 DSM, DSM 8739T DSM | ||
| Arcobacter cibarius | Gram-, spiral shaped | 2 | Yes | DSM 17680T DSM | ||||
| Arcobacter cryaerophilus | enteritis and bacteremia | Gram-, spiral shaped | feces, blood | 2 | Yes | CCUG 17801T NVU, T277 CPB, DSM 7289T DSM, V441 CPB, QBR_3911 QBC, QBR_3998 QBC | ||
| Arcobacter defluvii | Gram-, spiral shaped | water | 1 | No | ||||
| Arcobacter ellisii | Gram-, spiral shaped | 1 | No | |||||
| Arcobacter halophilus | Gram-, spiral shaped | water | 1 | Yes | DSM 18005T DSM | |||
| Arcobacter marinum | Gram-, spiral shaped | 1 | No | |||||
| Arcobacter molluscorum | Gram-, spiral shaped | 1 | No | |||||
| Arcobacter mytili | Gram-, spiral shaped | 1 | No | |||||
| Arcobacter nitrofigilis | Gram-, spiral shaped | Roots, nitrogen fixating | 1 | Yes | DSM 7299T DSM | |||
| Arcobacter skirrowii | diarrhea | Gram-, spiral shaped | Feces | 1 | Yes | CCUG 10374T NVU, DSM 7302T DSM | ||
| Arcobacter thereius | Gram-, spiral shaped | 1 | No | |||||
| Arcobacter trophiarum | Gram-, spiral shaped | 1 | No | |||||
| Aromatoleum alkani | Rod, facultative aerobic, motile Gram- | Yes | HxN1 MPB | |||||
| Aromatoleum anaerobicus | Rod, facultative aerobic, motile Gram- | Yes | LuFRes1 MPB | |||||
| Aromatoleum aromaticum | Rod, facultative aerobic, motile Gram- | Yes | EbN1 MPB | |||||
| Aromatoleum bremensis | Rod, facultative aerobic, motile Gram- | Yes | PbN1 MPB | |||||
| Aromatoleum buckelii | Rod, facultative aerobic, motile Gram- | Yes | U120 MPB | |||||
| Aromatoleum diolicum | Rod, facultative aerobic, motile Gram- | Yes | 22Lin MPB | |||||
| Aromatoleum evansii | Rod, facultative aerobic, motile Gram- | Yes | KB740 MPB | |||||
| Aromatoleum pretroleum | Rod, facultative aerobic, motile Gram- | Yes | ToN1 MPB | |||||
| Aromatoleum terpenicum | Rod, facultative aerobic, motile Gram- | Yes | pCyN1 MPB | |||||
| Aromatoleum tolulyticus | Rod, facultative aerobic, motile Gram- | Yes | Tol4 MPB | |||||
| Aromatoleum toluolicum | Rod, facultative aerobic, motile Gram- | Yes | T MPB | |||||
| Aromatoleum toluvorans | Rod, facultative aerobic, motile Gram- | Yes | Td21 MPB | |||||
| Arsenicicoccus dermatophilus | Gram+, aerobe | Environment | 2 | Yes | DSM 25571T DSM, DSM 25572 DSM | |||
| Arsenicicoccus piscis | Gram+, aerobe | Environment | 1 | No | ||||
| Arsenicoccus bolidensis | Gram+, aerobe | Environment | 2 | Yes | DSM 15745T DSM, DSM 30750 DSM | |||
| Arsenophonus nasoniae | Pathogen of male wasp eggs | Gram-, rods, occasionally filamentous, non motile, facultative anaerobe | Wasps | 1 | Yes | DSM 15247T HAM | ||
| Arthroascus schoenii | Yeast | Yes | CBS 2556 CBS | |||||
| Arthrobacter agilis | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | No | ||||
| Arthrobacter albidus | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | No | ||||
| Arthrobacter albus | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | No | ||||
| Arthrobacter alkaliphilus | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | No | ||||
| Arthrobacter alpinus | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | No | ||||
| Arthrobacter antarcticus | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | No | ||||
| Arthrobacter ardleyensis | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 17432T DSM | |||
| Arthrobacter arilaitensis | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 16368T DSM | |||
| Arthrobacter aurescens | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 20116T DSM, HKI 11247 HKJ | |||
| Arthrobacter bergerei | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 16367T DSM | |||
| Arthrobacter castelli | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | No | ||||
| Arthrobacter chlorophenolicus | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | No | ||||
| Arthrobacter citreus | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 20133T DSM, IMET 10680T HKJ | |||
| Arthrobacter creatinolyticus | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | 0807M08029702 IBS, DSM 15881T DSM | |||
| Arthrobacter cryoconiti | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | No | ||||
| Arthrobacter cryotolerans | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | No | ||||
| Arthrobacter crystallopoietes | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 20117T DSM | |||
| Arthrobacter cumminsii | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil, urine, skin infections | 1 | Yes | 108 PIM, 7253060 SLT, C2 MVO, DSM 10493T DSM, DSM 10494 DSM | |||
| Arthrobacter defluvii | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | No | ||||
| Arthrobacter echigonensis | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | No | ||||
| Arthrobacter equi | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | No | ||||
| Arthrobacter flavus | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | CIP 107766T CIP | |||
| Arthrobacter gandavensis | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 15046T DSM | |||
| Arthrobacter gangotriensis | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 15796T DSM | |||
| Arthrobacter globiformis | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 20124T DSM | |||
| Arthrobacter histidinolovorans | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 20115T DSM | |||
| Arthrobacter humicola | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | No | ||||
| Arthrobacter ilicis | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 20138T DSM | |||
| Arthrobacter kerguelensis | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 15797T DSM | |||
| Arthrobacter koreensis | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 16760T DSM | |||
| Arthrobacter livingstonensis | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | No | ||||
| Arthrobacter luteolus | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 13067T DSM | |||
| Arthrobacter methylotrophus | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | No | ||||
| Arthrobacter monumenti | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 16405T DSM | |||
| Arthrobacter mysorens | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 12798T DSM | |||
| Arthrobacter nasiphocae | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 13988T DSM | |||
| Arthrobacter nicotianae | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil, air | 1 | Yes | IMET 10353T HKJ | |||
| Arthrobacter nicotinovorans | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 420T DSM | |||
| Arthrobacter niigatensis | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | No | ||||
| Arthrobacter nitroguajacolicus | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | CIP 108435T CIP | |||
| Arthrobacter oryzae | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | No | ||||
| Arthrobacter oxydans | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil, air | 1 | Yes | DSM 20119T DSM, IMET 10684T HKJ | |||
| Arthrobacter parietis | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 16404T DSM | |||
| Arthrobacter pascens | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 20545T DSM | |||
| Arthrobacter phenanthrenivorans | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | No | ||||
| Arthrobacter pigmenti | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | No | ||||
| Arthrobacter polychromogenes | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | B253 UFL, DSM 20136T DSM, IMET 11071T HKJ | |||
| Arthrobacter protophormiae | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 20168T DSM | |||
| Arthrobacter psychrochitiniphilus | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | No | ||||
| Arthrobacter psychrolactophilus | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 15612T DSM, DSM 15454T DSM | |||
| Arthrobacter psychrophenolicus | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | No | ||||
| Arthrobacter pyridinolis | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | B384 UFL | |||
| Arthrobacter ramosus | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | IMET 10685T HKJ | |||
| Arthrobacter rhombi | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | No | ||||
| Arthrobacter roseus | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 14508T DSM | |||
| Arthrobacter russicus | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 14555T DSM | |||
| Arthrobacter sanguinis | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | IMET 10685T HKJ | |||
| Arthrobacter scleromae | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 17756T DSM | |||
| Arthrobacter soli | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 14508T DSM | |||
| Arthrobacter sp | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | P1 B386 UFL, AP_125_4_09 ERL | |||
| Arthrobacter stackebrandtii | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 16005T DSM | |||
| Arthrobacter subterraneus | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 14508T DSM | |||
| Arthrobacter sulfonivorans | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 14002T DSM | |||
| Arthrobacter sulfureus | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 20167T DSM, B571 UFL | |||
| Arthrobacter tecti | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 16407T DSM | |||
| Arthrobacter tumbae | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 16406T DSM | |||
| Arthrobacter uratoxydans | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | HKI 11492 HKJ, DSM 20648 DSM, DSM 20647T DSM | |||
| Arthrobacter ureafaciens | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | Yes | DSM 20126T DSM | |||
| Arthrobacter viscosus | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil | 1 | No | ||||
| Arthrobacter woluwensis | Obligate aerobe, Gram+, rods during exponential growth, cocci in stationary phase | Soil, blood culture | 1 | Yes | DSM 10495T DSM | |||
| Arthroderma benhamiae | Fungus | Yes | 24 VML | |||||
| Arthrographis_kalrae[ana]# (Eremomyces_langeronii[teleo]) | Yes | MY131_10 ERL | ||||||
| Aspergillus brasiliensis | Fungus | Yes | ATCC 16404 K7444 HED | |||||
| Aspergillus flavus | Fungus | Yes | 126 RV4_06 VML, 1081 PFM | |||||
| Aspergillus fumigatus | Fungus | Yes | 1015 PFM, 43_d VML, 45_II VML, 47_6 VML, 47_6_Rev VML | |||||
| Aspergillus fumigatus wild | Fungus | Yes | VML | |||||
| Aspergillus niger | Fungus | Yes | Isolat R1 HED, ATCC 6275 v-EMP_CH_02 HED, ATCC 6275 K7440 HED, ATCC 15475 K7443 HED, 21 VML, 1069 PFM | |||||
| Aspergillus terreus | Fungus | Yes | 1080 PFM, 84 VML | |||||
| Aspergillus versicolor | Fungus | Yes | RV07_01 19 VML | |||||
| Aspergillus_thermomutatus[ana] (Neosartorya_pseudofischeri[teleo]#) | Fungus | Yes | RV_04 VML | |||||
| Atopobium fossor | Abcess in horses | Gram+, rod or elliptical shaped, anaerobic | Horse pharynx | 2 | No | |||
| Atopobium minutum | Bacterial vaginosis | Gram+, rod or elliptical shaped, anaerobic | vagina | 2 | Yes | DSM 20586T DSM, 12 RLT, DSM 20585 DSM | ||
| Atopobium parvulum | Gram+, rod or elliptical shaped, anaerobic | 1 | Yes | DSM 20469T DSM, P10flue_re3AN USH, P2bue_li4AN USH, P5bue_3_6_1AN USH, P9bue_16_1AN USH, VA29867_11 ERL | ||||
| Atopobium rimae | Gram+, rod or elliptical shaped, anaerobic | mouth | 1 | Yes | BB_JD29_234 MLB, P8bue_re4AN USH, P8flue_re4AN USH | |||
| Atopobium sp | Gram+, rod or elliptical shaped, anaerobic | 2 | Yes | 1H12053794_5e MVD | ||||
| Atopobium vaginae | Bacterial vaginosis | Gram+, rod or elliptical shaped, anaerobic | vagina, normal flora | 1 | Yes | VA_14183_00 15 UKE, DSM 15829T DSM | ||
| Aureimonas altamirensis | Yes | 284 RLT | ||||||
| Aureobasidium pullulans | Hypersensitivity pneumonitis | Yeast-like fungus | Plants, humidifiers | Yes | 8125042_b SLT, MY_RV5_2008 ERL, RV_05 VML | |||
| Austwickia chelonae | Yes | DSM 44178T DSM | ||||||
| Avibacterium avium | Can cause sinusitis and pneumonia in calves | Gram-, facultatively anaerobic, rods | Upper respiratory tract of chicken | 1 | Yes | DSM 18557T DSM | ||
| Avibacterium endocarditidis | Gram-, facultatively anaerobic, rods | Valvar endocarditis in chicken | 2 | Yes | DSM 18224T DSM | |||
| Avibacterium gallinarum | Low grade disese | Gram-, facultatively anaerobic, rods | Upper respiratory tract of chicken | 2 | Yes | DSM 17481T DSM | ||
| Avibacterium paragallinarum | Infectious coryza in chickens | Gram-, facultatively anaerobic, rods | Upper respiratory tract of chicken | 2 | No | |||
| Avibacterium volantium | Gram-, facultatively anaerobic, rods | 1 | Yes | DSM 18578T DSM | ||||
| Azoarcus anaerobius | Gram-, single polar flagellum, facultatively anaerobic, rods | 1 | No | |||||
| Azoarcus buckelii | Gram-, single polar flagellum, facultatively anaerobic, rods | 1 | No | |||||
| Azoarcus communis | Gram-, single polar flagellum, facultatively anaerobic, rods | Plants | 1 | Yes | Swub3 MPB | |||
| Azoarcus evansii | Gram-, single polar flagellum, facultatively anaerobic, rods | Plants | 1 | No | ||||
| Azoarcus indigens | Gram-, single polar flagellum, facultatively anaerobic, rods | Plants | 1 | Yes | VB32 MPB | |||
| Azoarcus sp | Gram-, single polar flagellum, facultatively anaerobic, rods | 1 | Yes | BH72 MPB | ||||
| Azoarcus toluclasticus | Gram-, single polar flagellum, facultatively anaerobic, rods | water | 1 | Yes | VB32 MPB | |||
| Azoarcus tolulyticus | Gram-, single polar flagellum, facultatively anaerobic, rods | Petroloeum contaminated water | 1 | Yes | VB32 MPB | |||
| Azoarcus toluvorans | Gram-, single polar flagellum, facultatively anaerobic, rods | soil | 1 | Yes | VB32 MPB | |||
| Azohydromonas australica | Gram-, short to straight coccoid rods or rods, motile | Soil | 1 | No | ||||
| Azohydromonas lata | Gram-, short to straight coccoid rods or rods, motile | Soil | 1 | Yes | DSM 1122T DSM | |||
| Bacillus acidiceler | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | environment, dust | 1 | No | ||||
| Bacillus acidicola | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Moss | 1 | Yes | DSM 14745T DSM | |||
| Bacillus acidiproducens | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | No | ||||
| Bacillus aeolius | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Water from culcanic origin | 1 | No | ||||
| Bacillus aerius | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Air | 1 | No | ||||
| Bacillus aerophilus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | air | 1 | No | ||||
| Bacillus agaradhaerens | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | Yes | DSM 8721T DSM | |||
| Bacillus aidingensis | Gram+, rod shaped, produce endospores | sediment in salt lake | 1 | No | ||||
| Bacillus akibai | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soda lake | 1 | Yes | CIP 109018T CIP | |||
| Bacillus alcalophilus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Alkaline water | 1 | Yes | B446 UFL, DSM 485T DSM | |||
| Bacillus algicola | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Brown algea | 1 | Yes | CIP 107850T CIP | |||
| Bacillus alkalinitrilicus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | No | ||||
| Bacillus alkalisediminis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | No | ||||
| Bacillus alkalitelluris | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | No | ||||
| Bacillus altitudinis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Air | 1 | Yes | CS 542 4 BRB, CS 809 1 BRB | |||
| Bacillus alveayuensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Deep sea sediment | 1 | Yes | CIP 108784T CIP | |||
| Bacillus amyloliquefaciens | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | Yes | CIP 103265T CIP | |||
| Bacillus amyloliquefaciens ssp amyloliquefasciens | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | No | ||||
| Bacillus amyloliquefaciens ssp plantarum | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | No | ||||
| Bacillus aquimaris | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Seawater | 1 | Yes | DSM 16205T DSM | |||
| Bacillus arsenicus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | Yes | 4_2 TUB, DSM 15822T DSM | |||
| Bacillus aryabhattai | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | No | ||||
| Bacillus asahii | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | Yes | CIP 108638T CIP | |||
| Bacillus atrophaeus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Water | 1 | Yes | DSM 2277 DSM,DSM 5551 DSM, DSM 675 DSM, DSM 7264T DSM | |||
| Bacillus aurantiacus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soda lake | 1 | No | ||||
| Bacillus azotoformans | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | Yes | DSM 1046T DSM | |||
| Bacillus badius | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Feces, dust, water, food, antacids | 1 | Yes | DSM 23T DSM | |||
| Bacillus barbaricus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | Yes | DSM 14730T DSM | |||
| Bacillus bataviensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | Yes | DSM 15601T DSM | |||
| Bacillus beijingensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | No | ||||
| Bacillus benzoevorans | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | Yes | DSM 5391T DSM | |||
| Bacillus berkeleyi | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | No | ||||
| Bacillus beveridgei | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | No | ||||
| Bacillus bogoriensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | No | ||||
| Bacillus boroniphilus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | No | ||||
| Bacillus butanolivorans | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | No | ||||
| Bacillus canaveralius | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | No | ||||
| Bacillus carboniphilus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | Yes | DSM 17613T DSM | |||
| Bacillus cecembensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | No | ||||
| Bacillus cellulosilyticus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | Yes | DSM 2522T DSM | |||
| Bacillus cereus | Gastroenteritis, ocular infections, bacteremia | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Blood samples, feces and urine samples, optical swab | 2 | Yes | 994000168 LBK, 4080 LBK, DSM 31T DSM | ATCC 4342 SMI, ATCC 10702 SMI, ATCC 10987 SMI, F2085-98 SMI, F4810-72 SMI, MHI 1305 SMI, F837-76 SMI, IH41385 SMI, MHI 13 SMI, NVH 0597-98 SMI, NVH 0597-99 SMI, NVH 1518-99 SMI, RIVM BC67 SMI, SJ1 SMI, WSBC 10286 SMI, WSBC 10483 SMI, BC6901 SMI, SMI environmental isolate SMI | |
| Bacillus chagannorensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soda lake | 1 | Yes | CIP 109712T CIP | |||
| Bacillus chungangensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Sea water | 1 | No | ||||
| Bacillus cibi | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Seafood | 1 | Yes | DSM 16189T DSM | |||
| Bacillus circulans | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | CS 220_1a BRB, DSM 11T DSM | ||||
| Bacillus clarkii | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 8720T DSM | ||||
| Bacillus clausii | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 8716T DSM | ||||
| Bacillus coagulans | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil, acid foods | 1 | Yes | B321 UFL, DSM 1T DSM | |||
| Bacillus coahuilensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus cohnii | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 6307T DSM | ||||
| Bacillus daliensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus decisifrondis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus decolorationis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 14890T DSM | ||||
| Bacillus drentensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 15600T DSM | ||||
| Bacillus endophyticus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 13796T DSM | ||||
| Bacillus endoradicis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus farraginis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 16013T DSM | ||||
| Bacillus fastidiosus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | Yes | DSM 91T DSM | |||
| Bacillus firmus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | Yes | DSM 12T DSM | |||
| Bacillus flexus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 1320T DSM, 100331_30 USP | SMI M14-03 SMI | |||
| Bacillus foraminis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus fordii | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 16014T DSM | ||||
| Bacillus fortis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 16012T DSM | ||||
| Bacillus fumarioli | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus funiculus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 15141T DSM | ||||
| Bacillus galactosidilyticus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 15595T DSM | ||||
| Bacillus galliciensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus gelatini | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus gibsonii | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | CS 231_11b BRB, DSM 8722T DSM | ||||
| Bacillus ginsenghumi | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus ginsengi | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus graminis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus halmapalus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 8723T DSM | ||||
| Bacillus halochares | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus halodurans | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 497T DSM | ||||
| Bacillus hemicellulosilyticus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 16731T DSM | ||||
| Bacillus hemicentroti | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus herbersteinensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus horikoshii | produces tetrodotoxin (TTX) | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | liver of fish isolated from soil | 1 | Yes | DSM 8719T DSM | alkaliphilic and alkalitolerant, aerobic endospore-forming bacteria. | |
| Bacillus horneckiae | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Yes | DSM 23495T DSM | |||||
| Bacillus horti | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 12751T DSM | ||||
| Bacillus humi | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 16318T DSM | ||||
| Bacillus hwajinpoensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 16206T DSM | ||||
| Bacillus idriensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | CIP 109494T CIP | ||||
| Bacillus indicus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 15820T DSM | ||||
| Bacillus infantis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | CIP 109493T CIP | ||||
| Bacillus infernus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus iranensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus isabeliae | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus isronensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus jeotgali | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 18226T DSM | ||||
| Bacillus kochii | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus koreensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 16467T DSM | ||||
| Bacillus kribbensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus krulwichiae | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 18225T DSM | ||||
| Bacillus lehensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus lentus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | Yes | DSM 9T DSM | |||
| Bacillus licheniformis | cause of abortion in cattle, sheep and pigs, and also isolated from suppurative lesions of horses and cattle | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil, plants | 1 | Yes | 992000432 LBK, CS 54_1 BRB, DSM 13T DSM | ||
| Bacillus litoralis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 16303T DSM | ||||
| Bacillus localis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus luciferensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 18845T DSM | ||||
| Bacillus luteolus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus macauensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 17262T DSM | ||||
| Bacillus macayae | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus mannanilyticus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 16130T DSM | ||||
| Bacillus marisflavi | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 16204T DSM | ||||
| Bacillus marmarensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus massiliensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | 1I12072947_1e MVD | ||||
| Bacillus megaterium | Non-pathogenic | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Soil | 1 | Yes | DSM 32T DSM | ||
| Bacillus methanolicus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus methylotrophicus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus mojavensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 9205T DSM | ||||
| Bacillus muralis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 16288T DSM | ||||
| Bacillus murimartini | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus mycoides | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | soil | 1 | Yes | DSM 2048T DSM | |||
| Bacillus nanhaiensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus nanhaiisediminis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus nealsonii | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 15077T DSM | ||||
| Bacillus neizhouensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus niabensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus niacini | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 2923T DSM | ||||
| Bacillus novalis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 15603T DSM | ||||
| Bacillus oceanisediminis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus odysseyi | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 18869T DSM | ||||
| Bacillus okhensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | CIP 109247T CIP | ||||
| Bacillus okuhidensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 13666T DSM | ||||
| Bacillus oleronius | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 9356T DSM | ||||
| Bacillus oshimensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | CIP 108751T CIP | ||||
| Bacillus panaciterrae | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus patagoniensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 16117T DSM | ||||
| Bacillus persepolensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus plakortidis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus pocheonensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus polygoni | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus pseudalcaliphilus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 8725T DSM | ||||
| Bacillus pseudofirmus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | CS 123_1a1 BRB, DSM 8715T DSM, DSM 2516 DSM, DSM 9718 DSM, DSM 9746 DSM, CS 629_2b BRB | ||||
| Bacillus pseudomycoides | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 12442T DSM | ||||
| Bacillus psychrosaccharolyticus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 6T DSM | ||||
| Bacillus pumilus | can cause food poisoning | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 13835 DSM, DSM 1794 DSM, DSM 27T DSM, DSM 354 DSM, IAM 12050 PAH, IAM 12469 PAH | |||
| Bacillus purgationiresistens | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus qingdaonensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus rigui | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus ruris | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 17057T DSM | ||||
| Bacillus safensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | CIP 109412 CIP | ||||
| Bacillus salarius | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 16461T DSM | ||||
| Bacillus saliphilus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus selenatarsenstis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus selenitireducens | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus seohaeanensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 16464T DSM | ||||
| Bacillus shackletonii | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 18868T DSM | ||||
| Bacillus siamensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus simplex | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | CS 206_1aI BRB, DSM 1321T DSM | ||||
| Bacillus siralis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 13140T DSM | ||||
| Bacillus smithii | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | CIP 103790T CIP, DSM 4216T DSM | ||||
| Bacillus soli | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 15604T DSM | ||||
| Bacillus solisalsi | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus sonorensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 13779T DSM | ||||
| Bacillus sp | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | LB_101250b_09 ERL | ||||
| Bacillus sporothermodurans | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 10599T DSM | ||||
| Bacillus stratosphericus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | Air | 1 | No | ||||
| Bacillus subterraneus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 13966T DSM | ||||
| Bacillus subtilis | can cause food poisoning | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | 107_W_7_QSA IBS, DSM 5552 DSM, DSM 5611 DSM | |||
| Bacillus subtilis ssp inaquosorum | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus subtilis ssp spizizenii | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 15029T DSM | ||||
| Bacillus subtilis ssp subtilis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 10T DSM, DSM 5660 DSM | ||||
| Bacillus taenensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus taquilensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus thermantarcticus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus thermoamylovorans | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | 10w413986 RLH | ||||
| Bacillus thermocloacae | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus thermolactis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus thioparans | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | CIP 109765T CIP | ||||
| Bacillus thuringiensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 2046T DSM | 4CC1 SMI, ATCC 10792 SMI, ATCC 35646 SMI, BGSC 4AJ1 SMI, BGSC 4AW1 SMI, BGSC 4BD1 SMI, BGSC 4Y1 SMI, CIP 105674 SMI | |||
| Bacillus trypoxylicola | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus tusciae | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacillus vallismortis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 11031T DSM | ||||
| Bacillus vedderi | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 9768T DSM | ||||
| Bacillus vietnamensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 18898T DSM | ||||
| Bacillus vireti | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 15602T DSM | ||||
| Bacillus wakoensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 2521T DSM | ||||
| Bacillus weihenstephanensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 11821T DSM | DSM 11821 SMI | |||
| Bacillus xiaoxiensis | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | No | |||||
| Bacteroides acidifaciens | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Bacteroides barnesiae | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Bacteroides caccae | Gram-, bacilli, anaerobe but aerotolerant | feces | 2 | Yes | 103 PIM, DSM 19024T DSM | |||
| Bacteroides cellulosilyticus | Gram-, bacilli, anaerobe but aerotolerant | 2 | Yes | CCUG 56000 CCUG, DSM 14838T DSM | ||||
| Bacteroides cellulosolvens | Gram-, bacilli, anaerobe but aerotolerant | water | 1 | No | ||||
| Bacteroides chinchillae | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Bacteroides clarus | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Bacteroides coagulans | Infections following gastrointestinal surgery | Gram-, bacilli, anaerobe but aerotolerant | Gastrointestinal tract | 2 | Yes | DSM 20705T DSM | ||
| Bacteroides coprocola | Gram-, bacilli, anaerobe but aerotolerant | Feces | 2 | Yes | DSM 17136T DSM | |||
| Bacteroides coprophilus | Gram-, bacilli, anaerobe but aerotolerant | Feces | 2 | Yes | DSM 18228T DSM | |||
| Bacteroides coprosuis | Gram-, bacilli, anaerobe but aerotolerant | Pig feces | 2 | No | ||||
| Bacteroides dorei | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Bacteroides eggerthii | Gram-, bacilli, anaerobe but aerotolerant | feces | 2 | Yes | DSM 20697T DSM | |||
| Bacteroides faecichinchillae | Gram-, bacilli, anaerobe but aerotolerant | Chinchilla feces | 2 | No | ||||
| Bacteroides faecis | Gram-, bacilli, anaerobe but aerotolerant | Human feces | 2 | No | ||||
| Bacteroides finegoldii | Gram-, bacilli, anaerobe but aerotolerant | 2 | Yes | DSM 17565T DSM | ||||
| Bacteroides fluxus | Gram-, bacilli, anaerobe but aerotolerant | 2 | Yes | DSM 22534T DSM | ||||
| Bacteroides fragilis | Infections following gastrointestinal surgery | Gram-, bacilli, anaerobe but aerotolerant | Gastrointestinal tract | 2 | Yes | CCM 4508 CCM, CCM 4509 CCM, DSM 2151T DSM, DSM 9669 DSM, HU26938_2 PNU, MB_5088_05 THL, MB_9009_05 THL, PNU BF_6712 PNU, PNU R19811 PNU | ||
| Bacteroides galacturonicus | Gram-, bacilli, anaerobe but aerotolerant | feces | 2 | No | ||||
| Bacteroides gallinarum | Gram-, bacilli, anaerobe but aerotolerant | 2 | Yes | DSM 18171T DSM | ||||
| Bacteroides graminisolvens | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Bacteroides helcogenes | Gram-, bacilli, anaerobe but aerotolerant | Swine abcess | 2 | No | ||||
| Bacteroides intestinalis | Gram-, bacilli, anaerobe but aerotolerant | 2 | Yes | DSM 17393T DSM, SW20 PNU, 110706_E9 LUMC | ||||
| Bacteroides massiliensis | Gram-, bacilli, anaerobe but aerotolerant | 2 | Yes | DSM 17679T DSM | ||||
| Bacteroides nordii | Gram-, bacilli, anaerobe but aerotolerant | 2 | Yes | 49151_2 PNU, DSM 18764T DSM, 22710_0377_Ana IBS | ||||
| Bacteroides oleiciplenus | Gram-, bacilli, anaerobe but aerotolerant | 2 | Yes | DSM 22535T DSM | ||||
| Bacteroides ovatus | Gram-, bacilli, anaerobe but aerotolerant | 2 | Yes | 11483_2 PNU, 32456_1 PNU, 53152 PNU, DSM 1896T DSM, HU36898_1 PNU, IBS_MS_21 IBS | ||||
| Bacteroides paurosaccharolyticus | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Bacteroides pectinophilus | Gram-, bacilli, anaerobe but aerotolerant | feces | 1 | No | ||||
| Bacteroides plebeius | Gram-, bacilli, anaerobe but aerotolerant | 2 | Yes | DSM 17135T DSM | ||||
| Bacteroides polypragmatus | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Bacteroides propionicifaciens | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Bacteroides pyogenes | Gram-, bacilli, anaerobe but aerotolerant | 2 | Yes | 995000355 LBK, DSM 19673T DSM, DSM 20611T DSM, DSM 20612 DSM | ||||
| Bacteroides rodentium | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Bacteroides salanitronis | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Bacteroides salyersiae | Gram-, bacilli, anaerobe but aerotolerant | 2 | Yes | DSM 18765T DSM, IBS_MS_27 IBS, 110706_A7 LUMC, 110706_F7 LUMC | ||||
| Bacteroides sartorii | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Bacteroides stercorirosoris | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Bacteroides stercoris | Gram-, bacilli, anaerobe but aerotolerant | feces | 2 | Yes | DSM 19555T DSM | |||
| Bacteroides thetaiotaomicron | Infections following gastrointestinal surgery | Gram-, bacilli, anaerobe but aerotolerant | Gastrointestinal tract | 2 | Yes | 53164 PNU, ATCC 29742 PNU, CCM 4713 CCM, CCM 6027 CCM, CCM 6028 CCM, DSM 2079T DSM, HU68218_5 PNU, DSM 2255 DSM 2, 71280_ PNU 2 | ||
| Bacteroides uniformis | Infections following gastrointestinal surgery | Gram-, bacilli, anaerobe but aerotolerant | Gastrointestinal tract | 2 | Yes | ATCC 8492T THL, DSM 6597T DSM, HU33120_3_13 PNU, 110706_F9 LUMC | ||
| Bacteroides ureolyticus | Gram-, bacilli, anaerobe but aerotolerant | Urine | 2 | Yes | DSM 20703T DSM, HU33416 PNU | Synonym Campylobacter ureolyticus | ||
| Bacteroides vulgatus | Infections following gastrointestinal surgery | Gram-, bacilli, anaerobe but aerotolerant | Gastrointestinal tract | 2 | Yes | DSM 1447T DSM, DSM 3289 DSM, HU40347_2 PNU, PNU 1536_5 PNU, PNU 71838 PNU | ||
| Bacteroides xylanisolvens | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Bacteroides xylanolyticus | Gram-, bacilli, anaerobe but aerotolerant | 2 | No | |||||
| Balneatrix alpica | Pneumonia and meningitis associated with spa therapy centres | Gram-, bacilli or coccibacilli, polymorphic | cerebrospinal fluid, blood, water | 2 | Yes | CIP 103589T HAM | ||
| Bartonella alsatica | rarely infects humans | Gram-, facultative intercellular parasites | rabbit blood | 2 | No | |||
| Bartonella bacilliformis | Carrion's fever | Gram-, facultative intercellular parasites | blood | 2 | No | |||
| Bartonella birtlesii | Gram-, facultative intercellular parasites | blood | 2 | No | ||||
| Bartonella bovis | Gram-, facultative intercellular parasites | blood | 2 | No | ||||
| Bartonella capreoli | Gram-, facultative intercellular parasites | blood | 2 | No | ||||
| Bartonella chomelii | Gram-, facultative intercellular parasites | blood | 2 | No | ||||
| Bartonella clarridgeiae | cat scratch disease | Gram-, facultative intercellular parasites | blood | 2 | No | |||
| Bartonella coopersplainsensis | Gram-, facultative intercellular parasites | blood | 2 | No | ||||
| Bartonella doshiae | Gram-, facultative intercellular parasites | animal blood | 2 | No | ||||
| Bartonella elizabethae | Gram-, facultative intercellular parasites | blood | 2 | No | ||||
| Bartonella grahamii | endocarditis and neuroretinitis | Gram-, facultative intercellular parasites | animal blood | 2 | No | |||
| Bartonella henselae | cat scratch disease, bacillary angiomatosis, peliosis hepatis, endocarditis, bacteremia with fever and neuroretinitis | Gram-, facultative intercellular parasites | blood | 2 | No | |||
| Bartonella japonica | Gram-, facultative intercellular parasites | blood | 2 | Yes | CIP 109861T CIP | |||
| Bartonella koehlerae | Gram-, facultative intercellular parasites | animal blood | 2 | No | ||||
| Bartonella peromysci | Gram-, facultative intercellular parasites | blood | 2 | No | ||||
| Bartonella queenslandensis | Gram-, facultative intercellular parasites | blood | 2 | No | ||||
| Bartonella quintana | trench fever | Gram-, facultative intercellular parasites | blood | 2 | Yes | 103739 UMR | ||
| Bartonella rattaustraliani | Gram-, facultative intercellular parasites | blood | 2 | No | ||||
| Bartonella rochalimae | Carrion's disease-like symptoms | Gram-, facultative intercellular parasites | blood | 2 | No | |||
| Bartonella schoenbuchensis | Gram-, facultative intercellular parasites | blood | 2 | No | ||||
| Bartonella silvatica | Gram-, facultative intercellular parasites | blood | 2 | No | ||||
| Bartonella talpae | Gram-, facultative intercellular parasites | blood | 2 | No | ||||
| Bartonella taylorii | Gram-, facultative intercellular parasites | blood | 2 | No | ||||
| Bartonella tribocorum | Gram-, facultative intercellular parasites | blood | 2 | No | ||||
| Bartonella vinsonii | Endocarditis | Gram-, facultative intercellular parasites | blood | 2 | No | |||
| Bartonella vinsonii ssp arupensis | Endocarditis | Gram-, facultative intercellular parasites | blood | 2 | No | |||
| Bartonella vinsonii ssp berkhoffii | Endocarditis | Gram-, facultative intercellular parasites | blood | 2 | No | |||
| Bartonella vinsonii ssp vinsonii | Endocarditis | Gram-, facultative intercellular parasites | blood | 2 | No | |||
| Beauveria bassiana | Fungus | Soil | Yes | VML | ||||
| Bergeyella zoohelcum | bacteremia caused by cat or dog bite | Gram-, rods, aerobic, non motile | Cat and dog bites, scratches, sputum, upper respiratory tract | 1 | Yes | LMG 8351T HAM | ||
| Bibersteinia trehalosi | Yes | CCUG 12393 CCUG, CCUG 35739 CCUG, CCUG 37711 CCUG, CCUG 46489 CCUG | ||||||
| Bifidobacterium actinocoloniiforme | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium adolescentis | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20083T DSM, DSM 20086 DSM, DSM 20087 DSM, VA14300_09 ERL | |||
| Bifidobacterium angulatum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20098T DSM, DSM 20225 DSM | |||
| Bifidobacterium animalis | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20105 DSM | |||
| Bifidobacterium animalis ssp animalis | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20104T DSM | |||
| Bifidobacterium animalis ssp lactis | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 10140 DSM | |||
| Bifidobacterium asteroides | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20089T DSM, DSM 20431 DSM | |||
| Bifidobacterium biavatii | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium bifidum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | 17_283 IBS, 48 PIM, DSM 20082 DSM, DSM 20215 DSM, DSM 20239 DSM, DSM 20456T DSM | |||
| Bifidobacterium bohemicum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium bombi | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium boum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20432T DSM | |||
| Bifidobacterium breve | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20091 DSM, DSM 20213T DSM, 110706_G6 LUMC | |||
| Bifidobacterium callitrichos | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium catenulatum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 16992T DSM, DSM 20224 DSM | |||
| Bifidobacterium choerinum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20434T DSM | |||
| Bifidobacterium coryneforme | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20216T DSM | |||
| Bifidobacterium cuniculi | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium dentium | Opportunistic pathogen, caries | Gram+, non motile, often branched anaerobic bacteria | Mouth | 1 | Yes | DSM 20084 DSM, DSM 20221 DSM, DSM 20436T DSM | ||
| Bifidobacterium gallicum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20093T DSM | |||
| Bifidobacterium gallinarum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20670T DSM | |||
| Bifidobacterium indicum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium kashiwanohense | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium longum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | BIFIDO IBS | |||
| Bifidobacterium longum ssp infantis | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20088T DSM | |||
| Bifidobacterium longum ssp longum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20090 DSM, DSM 20097 DSM, DSM 20218 DSM | |||
| Bifidobacterium longum ssp suis | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20211T DSM | |||
| Bifidobacterium magnum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20220 DSM, DSM 20222T DSM | |||
| Bifidobacterium merycicum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 6492T DSM, DSM 6493 DSM, DSM 6494 DSM | |||
| Bifidobacterium minimum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20102T DSM | |||
| Bifidobacterium mongoliense | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium pseudocatenulatum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20439 DSM | |||
| Bifidobacterium pseudolongum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium pseudolongum ssp globosum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium pseudolongum ssp pseudolongum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20099T DSM, DSM 20094 DSM | |||
| Bifidobacterium psychraerophilum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium pullorum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20433T DSM | |||
| Bifidobacterium reuteri | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium ruminantium | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 6489T DSM, DSM 6491 DSM | |||
| Bifidobacterium saeculare | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 6532 DSM, DSM 6533 DSM | |||
| Bifidobacterium saguini | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium scardovii | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium stellenboschense | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium stercoris | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium subtile | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium thermacidophilum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | No | ||||
| Bifidobacterium thermacidophilum ssp porcinum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 17755T DSM | |||
| Bifidobacterium thermacidophilum ssp thermacidophilum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 15837T DSM | |||
| Bifidobacterium thermophilum | Gram+, non motile, often branched anaerobic bacteria | Intestines, feces | 1 | Yes | DSM 20209 DSM, DSM 20210T DSM, DSM 20212 DSM | |||
| Bifidobacterium tsurumiense | Gram+, non motile, often branched anaerobic bacteria | Hamster dental plaque | 1 | No | ||||
| Bilophila sp | Gram-negative anaerobic rod | 2 | Yes | C52 MVO | Bilophila wadsworthia? | |||
| Blastomonas natatoria | Ovoid or rod shaped, Gram- motile, strictly aerobic | Fresh water | 1 | Yes | DSM 3183T HAM | |||
| Blastomonas ursincola | Ovoid or rod shaped, Gram- motile, strictly aerobic | Fresh water | 1 | Yes | DSM 9006T HAM | |||
| Blautia coccoides | Strictly anaerobic, coccoid, non-motile, Gram+ | feces | 1 | Yes | 1035_NCTC 11035T BOG | |||
| Blautia faecis | Strictly anaerobic, coccoid, non-motile, Gram+ | Feces | 1 | No | ||||
| Blautia glucerasea | Strictly anaerobic, coccoid, non-motile, Gram+ | 1 | No | |||||
| Blautia hansenii | Strictly anaerobic, coccoid, non-motile, Gram+ | Feces | 1 | No | ||||
| Blautia hydrogenotrophica | Strictly anaerobic, coccoid, non-motile, Gram+ | Intestines, feces | 1 | No | ||||
| Blautia luti | Strictly anaerobic, coccoid, non-motile, Gram+ | 1 | No | |||||
| Blautia producta | Septicemia | Strictly anaerobic, coccoid, non-motile, Gram+ | Blood | 1 | No | |||
| Blautia schinkii | Strictly anaerobic, coccoid, non-motile, Gram+ | 1 | No | |||||
| Blautia stercoris | Strictly anaerobic, coccoid, non-motile, Gram+ | feces | 1 | No | ||||
| Blautia wexlerae | Strictly anaerobic, coccoid, non-motile, Gram+ | feces | 2 | No | ||||
| Bordetella avium | Gram-, coccobacilli, obligate aerobes except B. petrii | Avian samples | 2 | Yes | DSM 11332T DSM, 10_04379_05 VAXM | SMI 21 SMI | ||
| Bordetella bronchiseptica | Gram-, coccobacilli, obligate aerobes except B. petrii | Animal samples | 2 | Yes | A220 FLR, REF_023 UZB, REF_022 UZB, INE_047 UZB, DSM 13414T DSM, DSM 10303 DSM, DIV_5526 UZB, BORD_781 UZB, BORD_760 UZB | SMI 19 SMI, SMI 20 SMI | ||
| Bordetella hinzii | Gram-, coccobacilli, obligate aerobes except B. petrii | Avian samples | 2 | Yes | DSM 11333T DSM, REF_021 LMG_14052 UZB, REF_024 LMG_15872 UZB, REF_025 LMG_1872 UZB | |||
| Bordetella holmesii | Gram-, coccobacilli, obligate aerobes except B. petrii | 2 | Yes | REF_027 LMG_15945T UZB, DSM 13416T DSM, REF_026 LMG_15946 UZB | ||||
| Bordetella parapertussis | Pertussis, respiratory tract infection | Gram-, coccobacilli, obligate aerobes except B. petrii | animal samples, respiratory tract | 2 | Yes | BORD_565 UZB, BORD_611 UZB, BORD_678 UZB, BORD_699 UZB, BORD_722 UZB, BORD_724 UZB, BORD_750 UZB, DSM 13415T DSM, DSM 4922 DSM, REF_028 ATCC_15237 UZB, REF_507 UZB | SMI 18 SMI, SMI 16 SMI | |
| Bordetella pertussis | Pertussis, respiratory tract infection | Gram-, coccobacilli, obligate aerobes except B. petrii | respiratory tract | 2 | Yes | BORD_246 UZB, BORD_487 UZB, BORD_631 UZB, BORD_653 UZB, DSM 4923 DSM, DSM 4925 DSM, DSM 4926 DSM, DSM 4927 DSM, DSM 5571T DSM, REF_029 ATCC_9340 UZB | SMI 17 SMI, SMI 22 SMI | |
| Bordetella petrii | Gram-, coccobacilli, obligate aerobes except B. petrii | 2 | Yes | 09_0665 UZB, DSM 12804T DSM, REF_504 UZB, REF_505 UZB, VA32495_09 ERL | ||||
| Bordetella sp | Gram-, coccobacilli, obligate aerobes except B. petrii | 2 | Yes | REF_502 UZB | ||||
| Bordetella trematum | Gram-, coccobacilli, obligate aerobes except B. petrii | 2 | Yes | REF_197 LMG_13506 UZB, DSM 11334T DSM, REF_198 LMG_14446 UZB | ||||
| Borrelia afzelii | Borreliosis | Helical filiform spirochete, anaerobic or microaerophilic | Ticks | 2 | No | |||
| Borrelia americana | Helical filiform spirochete, anaerobic or microaerophilic | Ticks | 2 | No | ||||
| Borrelia anserina | Helical filiform spirochete, anaerobic or microaerophilic | Ticks/fleas | 2 | No | ||||
| Borrelia baltazardii | Helical filiform spirochete, anaerobic or microaerophilic | Ticks/fleas | 2 | No | ||||
| Borrelia brasiliensis | Helical filiform spirochete, anaerobic or microaerophilic | Ticks/fleas | 2 | No | ||||
| Borrelia burgdorferi | Borreliosis | Helical filiform spirochete, anaerobic or microaerophilic | Ticks/fleas | 2 | Yes | OE TWF | ||
| Borrelia carolinensis | Helical filiform spirochete, anaerobic or microaerophilic | Ticks/fleas | 2 | No | ||||
| Borrelia caucasica | Helical filiform spirochete, anaerobic or microaerophilic | Ticks/fleas | 2 | No | ||||
| Borrelia coriaceae | Helical filiform spirochete, anaerobic or microaerophilic | Ticks | 2 | No | ||||
| Borrelia crocidurae | Helical filiform spirochete, anaerobic or microaerophilic | Ticks/fleas | 2 | No | ||||
| Borrelia dugesii | Helical filiform spirochete, anaerobic or microaerophilic | Ticks/fleas | 2 | No | ||||
| Borrelia duttonii | Helical filiform spirochete, anaerobic or microaerophilic | Ticks/fleas | 2 | No | ||||
| Borrelia garinii | Borreliosis | Helical filiform spirochete, anaerobic or microaerophilic | Ticks, Cat and dogs | 2 | Yes | AE TWF | ||
| Borrelia graingeri | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | |||||
| Borrelia harveyi | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | |||||
| Borrelia hermsii | Relapsing fever | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | ||||
| Borrelia hispanica | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | |||||
| Borrelia japonica | Helical filiform spirochete, anaerobic or microaerophilic | Ticks, Cat and dogs | 2 | No | ||||
| Borrelia latyschewii | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | |||||
| Borrelia lusitaniae | Borreliosis | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | ||||
| Borrelia mazzottii | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | |||||
| Borrelia miyamotoi | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | |||||
| Borrelia parkeri | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | |||||
| Borrelia persica | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | |||||
| Borrelia recurrentis | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | |||||
| Borrelia sinica | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | |||||
| Borrelia spielmanii | Borreliosis | Helical filiform spirochete, anaerobic or microaerophilic | ticks, blood | 2 | Yes | IE TWF | ||
| Borrelia tanukii | Helical filiform spirochete, anaerobic or microaerophilic | Ticks, Cat and dogs | 2 | No | ||||
| Borrelia theileri | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | |||||
| Borrelia tillae | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | |||||
| Borrelia turcica | Borreliosis and relapsing fever | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | ||||
| Borrelia turdi | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | |||||
| Borrelia turicatae | Relapsing fever | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | ||||
| Borrelia valaisiana | Borreliosis | Helical filiform spirochete, anaerobic or microaerophilic | Cerebral spinal fluid, blood | 2 | No | |||
| Borrelia venezuelensis | Relapsing fever | Helical filiform spirochete, anaerobic or microaerophilic | 2 | No | ||||
| Brachybacterium alimentarium | Gram+, aerobe, irregular shaped slender rods, non motile | dairy products | 1 | No | ||||
| Brachybacterium conglomeratum | Gram+, aerobe, irregular shaped slender rods, non motile | 1 | No | |||||
| Brachybacterium faecium | Gram+, aerobe, irregular shaped slender rods, non motile | poultry litter | 1 | Yes | IMET 11352T HKJ | |||
| Brachybacterium fresconis | Gram+, aerobe, irregular shaped slender rods, non motile | 1 | No | |||||
| Brachybacterium muris | Gram+, aerobe, irregular shaped slender rods, non motile | 1 | Yes | 7 RLT | ||||
| Brachybacterium nesterenkovii | Gram+, aerobe, irregular shaped slender rods, non motile | 1 | Yes | DSM 9573T DSM, DSM 9574 DSM | ||||
| Brachybacterium paraconglomeratum | Gram+, aerobe, irregular shaped slender rods, non motile | poultry litter | 1 | No | ||||
| Brachybacterium phenoliresistens | Gram+, aerobe, irregular shaped slender rods, non motile | 1 | No | |||||
| Brachybacterium rhamnosum | Gram+, aerobe, irregular shaped slender rods, non motile | corn fermentation | 1 | No | ||||
| Brachybacterium saurashtrense | Gram+, aerobe, irregular shaped slender rods, non motile | 1 | No | |||||
| Brachybacterium squillarum | Gram+, aerobe, irregular shaped slender rods, non motile | 1 | No | |||||
| Brachybacterium tyrofermentans | Gram+, aerobe, irregular shaped slender rods, non motile | dairy products | 1 | No | ||||
| Brachybacterium zhongshanense | Gram+, aerobe, irregular shaped slender rods, non motile | 1 | No | |||||
| Brachyspira aalborgi | Human intestinal spirochaetosis | Gram-, spiral spirochaete obligate anaerobe | human colon | 1 | No | |||
| Brachyspira alvinipulli | Gram-, spiral spirochaete obligate anaerobe | swine intestine | No | |||||
| Brachyspira hyodysenteriae | Swine dysentery | Gram-, spiral spirochaete obligate anaerobe | swine intestine | 1 | No | |||
| Brachyspira innocens | Human intestinal spirochaetosis | Gram-, spiral spirochaete obligate anaerobe | swine intestine | 1 | No | |||
| Brachyspira intermedia | Swine diarreha | Gram-, spiral spirochaete obligate anaerobe | swine intestine | 1 | No | |||
| Brachyspira murdochii | Human intestinal spirochaetosis | Gram-, spiral spirochaete obligate anaerobe | swine intestine | 1 | Yes | DSM 12563T DSM | ||
| Brachyspira pilosicoli | Human intestinal spirochaetosis | Gram-, spiral spirochaete obligate anaerobe | swine intestine | 2 | No | GD82 GDD, GD83 GDD | ||
| Bradyrhizobium betae | Yes | DSM 17288T DSM | ||||||
| Bradyrhizobium denitrificans | Yes | DSM 1113T DSM | ||||||
| Brenneria alni | disease on trees | Gram-, rods, motile | plants, alder | 1 | Yes | DSM 11811T HAM | ||
| Brenneria nigrifluens | disease on trees | Gram-, rods, motile | plants, walnut | 1 | Yes | DSM 30175T HAM | ||
| Brenneria quercina | disease on trees | Gram-, rods, motile | plants, oak | 1 | Yes | CFBP 3617T MMG, DSM 4561T HAM | ||
| Brenneria rubrifaciens | disease on trees | Gram-, rods, motile | plants, walnut | 1 | Yes | CFBP 3619T MMG, DSM 4483T HAM | ||
| Brenneria salicis | disease on trees | Gram-, rods, motile | plants, salix | 1 | Yes | DSM 30166T HAM | ||
| Brevibacillus agri | Gram+, aerobic, motile rods | soil | 1 | Yes | DSM 6348T DSM | |||
| Brevibacillus aydinogluensis | Gram+, aerobic, motile rods | soil | 1 | No | ||||
| Brevibacillus borstelensis | Gram+, aerobic, motile rods | soil | 1 | Yes | 5_5 TUB, DSM 6347T DSM | |||
| Brevibacillus brevis | Gram+, aerobic, motile rods or Gram negative also | soil | 1 | Yes | DSM 30T DSM, B324 UFL | |||
| Brevibacillus centrosporus | Gram+, aerobic, motile rods | soil | 1 | Yes | DSM 8445T DSM | |||
| Brevibacillus choshinensis | Gram+, aerobic, motile rods | soil | 1 | Yes | DSM 8552T DSM | |||
| Brevibacillus fluminis | Gram+, aerobic, motile rods | soil | 1 | No | ||||
| Brevibacillus formosus | Gram+, aerobic, motile rods | soil | 1 | Yes | DSM 9885T DSM | |||
| Brevibacillus ginsengisoli | Gram+, aerobic, motile rods | soil | 1 | No | ||||
| Brevibacillus invocatus | Gram+, aerobic, motile rods | soil | 1 | Yes | DSM 16423T DSM | |||
| Brevibacillus laterosporus | Gram+, aerobic, motile rods | soil | 1 | Yes | DSM 25T DSM, DSM 8787 DSM | |||
| Brevibacillus levickii | Gram+, aerobic, motile rods | soil | 1 | No | ||||
| Brevibacillus limnophilus | Gram+, aerobic, motile rods | soil | 1 | No | ||||
| Brevibacillus panacihumi | Gram+, aerobic, motile rods | soil | 1 | No | ||||
| Brevibacillus parabrevis | Gram+, aerobic, motile rods | soil, dairy products | 1 | Yes | 090915_03 LBK, DSM 8376T DSM | |||
| Brevibacillus reuszeri | Gram+, aerobic, motile rods | soil | 1 | Yes | DSM 9887T DSM | |||
| Brevibacillus thermoruber | Gram+, aerobic, motile rods | soil | 1 | No | ||||
| Brevibacterium albidum (see Curtobacterium albidum) | Gram+, aerobic rods | soil | 1 | Yes | (see Curtobacterium albidum) | |||
| Brevibacterium antiquum | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium aurantiacum | Gram+, aerobic rods | soil | 1 | Yes | DSM 20426T DSM | |||
| Brevibacterium avium | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium casei | Sepsis in immunocompromized patiens | Gram+, aerobic rods | soil | 1 | Yes | 0808M02034001 IBS, 090915_01 LBK, IMET 10997T HKJ | ||
| Brevibacterium celere | Gram+, aerobic rods | soil | 1 | Yes | DSM 15453T DSM | |||
| Brevibacterium epidermis | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium frigoritolerans | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium halotolerans | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium iodinum | Gram+, aerobic rods | soil, skin | 1 | Yes | DSM 20626T DSM, IMET 10995T HKJ | |||
| Brevibacterium linens | Gram+, aerobic rods | dairy products, human skin, soil | 1 | Yes | IMET 11075T HKJ | |||
| Brevibacterium luteolum | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium marinum | Gram+, aerobic rods | soil | 1 | Yes | DSM 18964T DSM | |||
| Brevibacterium massiliense | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium mcbrellneri | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium oceani | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium otitidis | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium paucivorans | Gram+, aerobic rods | soil | 1 | Yes | 4 RLT, DSM 13657T DSM | |||
| Brevibacterium permense | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium picturae | Gram+, aerobic rods | soil | 1 | Yes | DSM 16132T DSM | |||
| Brevibacterium pityocampae | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium ravenspurgense | Gram+, aerobic rods | soil | 1 | Yes | 2 RLT, 3 RLT, DSM 21258T DSM, DSM 21258T DSM | |||
| Brevibacterium salitolerans | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium samyangense | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium sandarakinum | Gram+, aerobic rods | soil | 1 | No | ||||
| Brevibacterium sanguinis | Gram+, aerobic rods | soil | 1 | Yes | 5 RLT, DSM 15677T DSM | |||
| Brevundimonas alba | Gram-, rod, motile, aerobe | soil | 1 | No | ||||
| Brevundimonas aurantiaca | Gram-, rod, motile, aerobe | 1 | Yes | DSM 4731T HAM | ||||
| Brevundimonas aveniformis | Gram-, rod, motile, aerobe | 1 | No | |||||
| Brevundimonas bacteroides | Gram-, rod, motile, aerobe | water | 1 | No | ||||
| Brevundimonas basaltis | Gram-, rod, motile, aerobe | 1 | No | |||||
| Brevundimonas bullata | Gram-, rod, motile, aerobe | 1 | No | |||||
| Brevundimonas diminuta | leaf-spot disease | Gram-, rod, motile, aerobe | plants | 1 | Yes | 021_W20 NFI, DSM 7234T HAM, 900200844 LBK | ||
| Brevundimonas halotolerans | Gram-, rod, motile, aerobe | 1 | No | |||||
| Brevundimonas intermedia | Gram-, rod, motile, aerobe | water | 1 | Yes | DSM 4732T HAM | |||
| Brevundimonas kwangchunensis | Gram-, rod, motile, aerobe | 1 | No | |||||
| Brevundimonas lenta | Gram-, rod, motile, aerobe | soil | 1 | No | ||||
| Brevundimonas mediterranea | Gram-, rod, motile, aerobe | 1 | No | |||||
| Brevundimonas naejangsanensis | Gram-, rod, motile, aerobe | 1 | No | |||||
| Brevundimonas nasdae | Gram-, rod, motile, aerobe | 1 | Yes | DSM 14572T HAM | ||||
| Brevundimonas poindexterae | Gram-, rod, motile, aerobe | 1 | No | |||||
| Brevundimonas sp | Gram-, rod, motile, aerobe | 1 | Yes | 097_NF18 NFI | ||||
| Brevundimonas staleyi | Gram-, rod, motile, aerobe | 1 | No | |||||
| Brevundimonas subvibrioides | Gram-, rod, motile, aerobe | 1 | Yes | DSM 4735T HAM | ||||
| Brevundimonas terrae | Gram-, rod, motile, aerobe | 1 | No | |||||
| Brevundimonas vancanneytii | Gram-, rod, motile, aerobe | blood | 1 | No | ||||
| Brevundimonas variabilis | Gram-, rod, motile, aerobe | 1 | No | |||||
| Brevundimonas vesicularis | septic arthritis in infants | Gram-, rod, motile, aerobe | blood | 1 | Yes | DSM 7226T HAM | ||
| Brochothrix thermosphacta | Yes | DSM 20171T LGL | ||||||
| Budvicia aquatica | Sepsis in immunocompromized patiens | Gram-, Motile rods | Water, feces | 1 | Yes | DSM 5075T HAM | ||
| Bulleidia extructa | Yes | P10bue_li3AN USH, P10flue_li10AN USH | ||||||
| Burkholderia ambifaria | Nonpathogenic | Obligate aerobic, Gram- rods | null | 1 | Yes | DSM 16087T DSM, LMG 11351 HAM | ||
| Burkholderia andropogonis | Nonpathogenic | Obligate aerobic, Gram- rods | Plants | 1 | Yes | DSM 9511T HAM | ||
| Burkholderia anthina | Nonpathogenic | Obligate aerobic, Gram- rods | null | 1 | Yes | DSM 16086T DSM, LMG 16670 HAM | ||
| Burkholderia brasiliensis | Nonpathogenic | Obligate aerobic, Gram- rods | null | 1 | No | null | null | |
| Burkholderia caledonica | Nonpathogenic | Obligate aerobic, Gram- rods | 1 | Yes | LMG 19076T HAM | |||
| Burkholderia caribiensis | Nonpathogenic | Obligate aerobic, Gram- rods | null | 1 | Yes | DSM 13236T HAM | ||
| Burkholderia caryophylli | Nonpathogenic | Obligate aerobic, Gram- rods | Plants | 1 | No | null | null | |
| Burkholderia cenocepacia | Infects plants and opportunistic infections "cepacia syndrome" in patients with cystic fibrosis | Obligate aerobic, Gram- rods | Plants, respiratory tract | 2 | Yes | LMG 12614 HAM, VA 40719_08 ERL | ||
| Burkholderia cepacia | Pulmonary infections | Obligate aerobic, Gram- rods | soil samples, respiratory tract | 2 | Yes | DSM 11737 DSM, DSM 50180 DSM, DSM 50181 DSM, DSM 9241 DSM, LMG 2161 HAM, MB_7544_05 THL, DSM 7288T DSM | ||
| Burkholderia cepacia_Group | Obligate aerobic, Gram- rods | 2 | Yes | 59 RLT, 18875_1 CHB | ||||
| Burkholderia diffusa | Obligate aerobic, Gram- rods | 2 | Yes | DSM 23434T DSM | ||||
| Burkholderia dolosa | Pulmonary infections | Obligate aerobic, Gram- rods | soil samples, respiratory tract | 2 | Yes | DSM 16088T DSM | ||
| Burkholderia fungorum | Nonpathogenic | Obligate aerobic, Gram- rods | null | 1 | Yes | LMG 20227T HAM | ||
| Burkholderia gladioli | Pulmonary infections | Obligate aerobic, Gram- rods | Plants, environmental samples, respiratory tract | 1 | Yes | Wv22575 CHB, BK1959 EVM, DSM 11318 DSM, DSM 4285T DSM, DSM 8361 DSM | ||
| Burkholderia glathei | Nonpathogenic | Obligate aerobic, Gram- rods | Rice pathogen, soil samples | 1 | Yes | DSM 50014T HAM | ||
| Burkholderia glumae | Nonpathogenic | Obligate aerobic, Gram- rods | Rice pathogen, soil samples | 1 | Yes | DSM 9512T HAM | ||
| Burkholderia graminis | Nonpathogenic | Obligate aerobic, Gram- rods | Plants | 1 | No | |||
| Burkholderia hospita | Nonpathogenic | Obligate aerobic, Gram- rods | 1 | No | ||||
| Burkholderia kururiensis | Nonpathogenic | Obligate aerobic, Gram- rods | Soil samples | 1 | No | |||
| Burkholderia lata | Obligate aerobic, Gram- rods | Yes | DSM 23089T DSM | |||||
| Burkholderia latens | Obligate aerobic, Gram- rods | Yes | DSM 23436T DSM | |||||
| Burkholderia metallica | Obligate aerobic, Gram- rods | Yes | DSM 23519T DSM | |||||
| Burkholderia multivorans | Pulmonary infections | Obligate aerobic, Gram- rods | soil samples, respiratory tract | 2 | Yes | DSM 13243T DSM, LMG 14293 HAM, VA40721a_08 ERL, VA40721b_08 ERL, VA40328_07 ERL | ||
| Burkholderia oklahomensis | null | Obligate aerobic, Gram- rods | null | No | null | null | ||
| Burkholderia phenazinium | Nonpathogenic | Obligate aerobic, Gram- rods | soil samples | 1 | Yes | DSM 10684T HAM | ||
| Burkholderia phenoliruptrix | Nonpathogenic | Obligate aerobic, Gram- rods | null | 1 | No | null | null | |
| Burkholderia phymatum | Nonpathogenic | Obligate aerobic, Gram- rods | Symbiotic with legumes, soil samples | 1 | Yes | LMG 21445T HAM | ||
| Burkholderia phytofirmans | Nonpathogenic | Obligate aerobic, Gram- rods | 1 | No | ||||
| Burkholderia plantarii | Nonpathogenic | Obligate aerobic, Gram- rods | Soil samples | 1 | Yes | DSM 9509T HAM | ||
| Burkholderia pyrrocinia | Nonpathogenic | Obligate aerobic, Gram- rods | Soil samples | 1 | Yes | LMG 14191T HAM, DSM 10685T DSM | ||
| Burkholderia sacchari | Nonpathogenic | Obligate aerobic, Gram- rods | 1 | Yes | LMG 19450T HAM | |||
| Burkholderia seminalis | Nonpathogenic | Obligate aerobic, Gram- rods | 1 | Yes | VA40474_09 ERL | |||
| Burkholderia singaporensis | null | Obligate aerobic, Gram- rods | null | No | null | null | ||
| Burkholderia sordidicola | Nonpathogenic | Obligate aerobic, Gram- rods | null | 1 | No | null | null | |
| Burkholderia stabilis | Nonpathogenic | Obligate aerobic, Gram- rods | null | 1 | Yes | LMG 14294T HAM, DSM 16586T DSM | ||
| Burkholderia terricola | Nonpathogenic | Obligate aerobic, Gram- rods | 1 | Yes | LMG 20594T HAM | |||
| Burkholderia thailandensis | Pulmonary infections | Obligate aerobic, Gram- rods | soil samples, respiratory tract | 2 | Yes | DSM 13276T HAM | ||
| Burkholderia tropica | Nonpathogenic | Obligate aerobic, Gram- rods | null | 1 | Yes | DSM 15359T HAM | ||
| Burkholderia tuberum | Nonpathogenic | Obligate aerobic, Gram- rods | Symbiotic with legumes, soil samples | 1 | Yes | LMG 21444T HAM | ||
| Burkholderia ubonensis | Nonpathogenic | Obligate aerobic, Gram- rods | 1 | No | ||||
| Burkholderia unamae | Nonpathogenic | Obligate aerobic, Gram- rods | 1 | No | ||||
| Burkholderia vietnamiensis | Pulmonary infections | Obligate aerobic, Gram- rods | soil samples, respiratory tract | 2 | Yes | LMG 10929T HAM | ||
| Burkholderia xenoverans | Nonpathogenic | Obligate aerobic, Gram- rods | Soil samples | 1 | Yes | LMG 21463T HAM | ||
| Buttiauxella agrestis | Gram-, small rods, motile, facultative anaerobic | Soil/water | 1 | Yes | DSM 4586T HAM | |||
| Buttiauxella brennerae | Gram-, small rods, motile, facultative anaerobic | Soil | 1 | Yes | DSM 9396T HAM | |||
| Buttiauxella ferragutiae | Gram-, small rods, motile, facultative anaerobic | Soil | 1 | Yes | DSM 9390T HAM | |||
| Buttiauxella gaviniae | Gram-, small rods, motile, facultative anaerobic | Soil | 1 | Yes | DSM 9393T HAM | |||
| Buttiauxella izardii | Gram-, small rods, motile, facultative anaerobic | Soil | 1 | Yes | DSM 9397T HAM | |||
| Buttiauxella noackiae | Gram-, small rods, motile, facultative anaerobic | Soil | 1 | Yes | DSM 9401T HAM | |||
| Buttiauxella warmboldiae | Gram-, small rods, motile, facultative anaerobic | Soil | 1 | Yes | DSM 9404T HAM | |||
| Butyricimonas synergistica | Gram-, obligately anaerobic, non spore forming, non motile rods | rat feces | 1 | No | ||||
| Butyricimonas virosa | Gram-, obligately anaerobic, non spore forming, non motile rods | rat feces | 1 | Yes | 144 RLT | |||
| Campylobacter avium | Gram-, spiral, microaerophilic, motile and oxidase positive | 2 | Yes | CCUG 56292T NVU | ||||
| Campylobacter canadensis | Gram-, spiral, microaerophilic, motile and oxidase positive | 1 | Yes | CCUG 54429T NVU | ||||
| Campylobacter coli | campylobacteriosis | Gram-, spiral, microaerophilic, motile and oxidase positive | cattle, swine and birds, food, feces | 2 | Yes | 10090_03 NVU, 11167_03 NVU, CCUG 11283T NVU | ||
| Campylobacter coli ssp coli | campylobacteriosis | Gram-, spiral, microaerophilic, motile and oxidase positive | cattle, swine and birds, food, feces | 2 | Yes | DSM 4689T FLI | ||
| Campylobacter concisus | Gram-, spiral, microaerophilic, motile and oxidase positive | mouth | 2 | Yes | 2009_44055 CMA, 2010_112101_Fecal CMA, 2010_112101_Oral CMA, 2010_113332_Fecal CMA, 2010_113332_Oral CMA, 2010_115605_Fecal CMA, 2010_115605_Oral CMA, 2010_120841 CMA, DSM 9716T DSM, K4 CMA, LMG 7964 LMG, M2 CMA, P3flue_re1AN USH, P7flue_li1AN USH | |||
| Campylobacter cuniculorum | Gram-, spiral, microaerophilic, motile and oxidase positive | rabbits | 2 | No | ||||
| Campylobacter curvus | abscess in mouth | Gram-, spiral, microaerophilic, motile and oxidase positive | mouth | 1 | Yes | DSM 6644T DSM, LMG 11033 LMG, LMG 11034 LMG, LMG 11247 LMG, LMG 13932 LMG | ||
| Campylobacter fetus ssp fetus | Abortion in cattle nad sheep, opportunistic pathogen i humans, bacteremia and thrombophlebitis | Gram-, spiral, microaerophilic, motile and oxidase positive | Blood, respiratory tract | 2 | Yes | CCUG 6823T NVU, DSM 5361T DSM, DSM 5361T FLI, RV412_A1_2010_02 LBK | ||
| Campylobacter fetus ssp venerealis | Abortion in cattle nad sheep, opportunistic pathogen i humans, bacteremia and thrombophlebitis | Gram-, spiral, microaerophilic, motile and oxidase positive | Blood, respiratory tract | 2 | Yes | CCUG 24260 NVU, CCUG 538T NVU, DSM 18826T DSM, NCTC 10354 FLI | ||
| Campylobacter gracilis | Gram-, spiral, microaerophilic, motile and oxidase positive | mouth | 2 | Yes | CCUG 27720T NVU, DSM 19528T DSM | |||
| Campylobacter helveticus | Gram-, spiral, microaerophilic, motile and oxidase positive | cats | 2 | Yes | 370_01 NVU, 8174_01 NVU, Blut 7986_08 NVU, CCUG 30682T NVU | |||
| Campylobacter hominis | Gram-, spiral, microaerophilic, motile and oxidase positive | feces | 2 | Yes | CCUG 45161T NVU | |||
| Campylobacter hyointestinalis | enteritis in swine | Gram-, spiral, microaerophilic, motile and oxidase positive | swine intestine | 1 | Yes | CCUG 14169T NVU, F223 CPB, ZC27 NVU | ||
| Campylobacter hyointestinalis ssp hyointestinalis | Gram-, spiral, microaerophilic, motile and oxidase positive | swine intestine | 1 | No | ||||
| Campylobacter hyointestinalis ssp lawsonii | Gram-, spiral, microaerophilic, motile and oxidase positive | swine intestine | 1 | No | ||||
| Campylobacter insulaenigrae | septecimia, enteritis in immunocompromized patients | Gram-, spiral, microaerophilic, motile and oxidase positive | marine mammals | 2 | No | |||
| Campylobacter jejuni | campylobacteriosis | Gram-, spiral, microaerophilic, motile and oxidase positive | cattle, swine and birds, food, feces | 2 | Yes | ATCC 29428 THL, MB_4738_05 THL, Bkt 4391_08 NVU, MB_6111_05 THL, MB_7240_05 THL | ||
| Campylobacter jejuni ssp doylei | campylobacteriosis | Gram-, spiral, microaerophilic, motile and oxidase positive | cattle, swine and birds, food, feces | 2 | Yes | A698 CPB, BRUG 374 CPB, C410 CPB, CCUG 24567T NVU, NCTC 11951_1 FLI | ||
| Campylobacter jejuni ssp jejuni | campylobacteriosis | Gram-, spiral, microaerophilic, motile and oxidase positive | cattle, swine and birds, food, feces | 2 | Yes | DSM 4688T DSM | ||
| Campylobacter lanienae | Gram-, spiral, microaerophilic, motile and oxidase positive | cattle feces | 2 | Yes | CCUG 44467T NVU | |||
| Campylobacter lari | diarrhea | Gram-, spiral, microaerophilic, motile and oxidase positive | feces | 1 | Yes | 227_99 NVU, 165_98 NVU, Cb 193_87 NVU | ||
| Campylobacter lari ssp concheus | diarrhea | Gram-, spiral, microaerophilic, motile and oxidase positive | feces | 1 | No | |||
| Campylobacter lari ssp lari | diarrhea | Gram-, spiral, microaerophilic, motile and oxidase positive | feces | 1 | Yes | CCUG 23947T NVU, DSM 11375T DSM | ||
| Campylobacter mucosalis | Gram-, spiral, microaerophilic, motile and oxidase positive | swine intestine | 2 | No | ||||
| Campylobacter peloridis | Gram-, spiral, microaerophilic, motile and oxidase positive | humans and molluscs | 2 | Yes | BRUG 251 CPB | |||
| Campylobacter rectus | Gram-, spiral, microaerophilic, motile and oxidase positive | mouth | 1 | Yes | DSM 3260T DSM | |||
| Campylobacter showae | Gram-, spiral, microaerophilic, motile and oxidase positive | mouth | 2 | Yes | CCUG 30254T NVU, AN_P2_bue_re3 USH, P3bue_re11AN USH, VA4369_11 ERL | |||
| Campylobacter sputorum | Gram-, spiral, microaerophilic, motile and oxidase positive | animal feces, sperm, mouth | 2 | Yes | DSM 5364 FLI, NCTC 11415 FLI, GD78 GDD | |||
| Campylobacter sputorum ssp bubulus | Gram-, spiral, microaerophilic, motile and oxidase positive | sheep feces, mouth | 2 | Yes | DSM 5363 FLI | |||
| Campylobacter sputorum ssp sputorum | Gram-, spiral, microaerophilic, motile and oxidase positive | bull sperm, mouth | 2 | No | ||||
| Campylobacter subantarcticus | Gram-, spiral, microaerophilic, motile and oxidase positive | 1 | No | |||||
| Campylobacter upsaliensis | campylobacteriosis | Gram-, spiral, microaerophilic, motile and oxidase positive | cats and dogs | 2 | Yes | 412_01 NVU, 451_01 NVU, Bkt 7522_08 NVU, CCUG 14913T NVU, DSM 5365T FLI | ||
| Campylobacter ureolyticus | Gram-, spiral, microaerophilic, motile and oxidase positive | 2 | Yes | 0807M22055902 bacil - IBS, 110324_29 PNU, 110324_95 PNU, 110324_96 PNU, VA20417_11 ERL | ||||
| Campylobacter volucris | Gram-, spiral, microaerophilic, motile and oxidase positive | 2 | No | |||||
| Candida aaseri | Yeast-like fungus | 2 | No | |||||
| Candida alai | Yeast | Yes | CBS 9899T CBS | |||||
| Candida albicans | Yeast-like fungus | 2 | Yes | ATCC 10231 THL, ATCC 10231 VML, ATCC 90028 VML, DSM 11943 DSM, DSM 11945 DSM, DSM 11949 DSM, DSM 1577 DSM, DSM 1665 DSM, DSM 3454 DSM, DSM 5817 DSM, DSM 6569 DSM, DSM 6659 DSM, RV_D VML, VA_17248_07 04 UKE | ||||
| Candida albicans_africana | vaginal candidiasis | Yeast-like fungus | Vagina | 2 | Yes | VML | ||
| Candida allociferrii | Infections in immunocompromized patients | Yeast-like fungus | 2 | Yes | VML | |||
| Candida amapae | Yeast-like fungus | 2 | No | |||||
| Candida ambrosiae | Yeast | Yes | CBS 8845 CBS | |||||
| Candida anatomiae | Yeast-like fungus | 2 | No | |||||
| Candida ancudensis | Yeast-like fungus | 2 | No | |||||
| Candida antillancae | Yeast-like fungus | 2 | No | |||||
| Candida apicola | Yeast-like fungus | 2 | No | |||||
| Candida apis | Yeast-like fungus | 2 | No | |||||
| Candida atlantica | Yeast-like fungus | 2 | No | |||||
| Candida atmosphaerica | Yeast-like fungus | 2 | No | |||||
| Candida auringiensis | Yeast-like fungus | 2 | No | |||||
| Candida auris | Yeast | Yes | CBS KCTC 17809 CBS, CBS KCTC 17810 CBS, DSM 21092T CBS | |||||
| Candida austromarina | Yeast-like fungus | 2 | No | |||||
| Candida azyma | Yeast-like fungus | 2 | No | |||||
| Candida beechii | Yeast-like fungus | 2 | No | |||||
| Candida bertae | Yeast-like fungus | 2 | No | |||||
| Candida berthetii | Yeast-like fungus | 2 | No | |||||
| Candida blankii | Yeast-like fungus | 2 | No | |||||
| Candida blattae | Yeast | Yes | CBS 9871T CBS | |||||
| Candida bohiensis | Yeast | Yes | CBS 9897T CBS | |||||
| Candida boidinii | Yeast-like fungus | 2 | Yes | DSM 70024 DSM, DSM 70026T DSM, DSM 70033 DSM, DSM 70034 DSM, VML | ||||
| Candida boleticola | Yeast-like fungus | 2 | No | |||||
| Candida bombi | Yeast-like fungus | 2 | No | |||||
| Candida bombicola | Yeast-like fungus | 2 | No | |||||
| Candida bracarensis | Yeast | Yes | CBS 10154T CBS, RV1 MY 1 10 ERL | |||||
| Candida buenavistaensis | Yeast | Yes | CBS 9895T CBS | |||||
| Candida buinensis | Yeast-like fungus | 2 | No | |||||
| Candida buturi | Yeast-like fungus | 2 | No | |||||
| Candida cantarellii | Yeast-like fungus | 2 | No | |||||
| Candida carpophila | Yeast | Yes | CBS 5256 CBS, CBS 7921 CBS | |||||
| Candida caseinolytica | Yeast-like fungus | 2 | No | |||||
| Candida castellii | Yeast-like fungus | 2 | Yes | CBS 4332T CBS | ||||
| Candida castrensis | Yeast-like fungus | 2 | No | |||||
| Candida catenulata | Yeast-like fungus | 2 | Yes | 138 VML, 86 VML, DSM 70040 DSM, DSM 70136 DSM | ||||
| Candida chilensis | Yeast-like fungus | 2 | No | |||||
| Candida chiropterum | Yeast-like fungus | 2 | No | |||||
| Candida chodatii (ana) Hyphopichia burtonii (teleo) | Yeast-like fungus | 2 | Yes | MY00872_06 ERL | ||||
| Candida coipomoensis | Yeast-like fungus | 2 | No | |||||
| Candida conglobata | Yeast-like fungus | 2 | No | |||||
| Candida cylindracea | Yeast-like fungus | 2 | Yes | DSM 2031T DSM | ||||
| Candida dubliniensis | Yeast-like fungus | 2 | Yes | 20 UKE, 99 PSB, RV_2_2006 VML | ||||
| Candida duobushaemulonii | 1 | Yes | CBS 6915 CBS, CBS 7798T CBS, CBS 7799 CBS, CBS 7800 CBS, CBS 9754 CBS, CBS CL 7829P CBS, MY916 09 ERL | |||||
| Candida ernobii | Yeast-like fungus | 2 | Yes | DSM 70858T DSM | ||||
| Candida freyschussii | Yeast-like fungus | 2 | Yes | DSM 70047 DSM | ||||
| Candida friedrichii | Yeast-like fungus | 2 | Yes | DSM 70050T DSM | ||||
| Candida frijolesensis | Yeast | Yes | CBS 10377T CBS | |||||
| Candida glabrata | Yeast-like fungus | 2 | Yes | 10035463_101 USH, 31 PSB, ATCC 2001T THL, ATCC 90030 VML, DSM 11950 DSM, DSM 6425 DSM, DSM 70615 DSM | ||||
| Candida haemulonii | Yeast-like fungus | 2 | Yes | DSM 70624T DSM, VML | ||||
| Candida inconspicua | Yeast-like fungus | 2 | Yes | DSM 70631 DSM | ||||
| Candida infanticola | Yeast | Yes | CBS 7922T CBS | |||||
| Candida intermedia | Yeast-like fungus | 2 | Yes | DSM 70753 DSM, MY565_09 ERL | ||||
| Candida labiduridarum | Yeast | Yes | CBS 10452T CBS | |||||
| Candida lactiscondensi | Yeast-like fungus | 2 | Yes | DSM 70635T DSM | ||||
| Candida magnoliae | Yeast-like fungus | 2 | Yes | DSM 70638T DSM, DSM 70639 DSM | ||||
| Candida maltosa | Yeast-like fungus | 2 | Yes | DSM 15531 DSM | ||||
| Candida membranifaciens | Yeast-like fungus | 2 | Yes | DSM 70109 DSM, MY913_09 ERL | ||||
| Candida mesenterica | Yeast-like fungus | 2 | Yes | DSM 70759 DSM, DSM 70015 DSM | ||||
| Candida metapsilosis | Yeast-like fungus | 2 | Yes | P3120_8_37 HAC, P3121_8_37 HAC | ||||
| Candida multigemmis | Yeast-like fungus | 2 | Yes | DSM 70862T DSM | ||||
| Candida nemodendra | Yeast-like fungus | 2 | Yes | DSM 70647T DSM | ||||
| Candida nitratophila | Yeast-like fungus | 2 | Yes | DSM 70649T DSM | ||||
| Candida nivariensis | Yeast-like fungus | 2 | Yes | 10_MYK 1021 MHH | ||||
| Candida nivariensis | Yeast-like fungus | 2 | Yes | RV490_Feb09_04 PSB | ||||
| Candida norvegica | Yeast-like fungus | 2 | Yes | DSM 70863 DSM | ||||
| Candida orthopsilosis | Yeast-like fungus | 2 | Yes | P3118_8_37 HAC, P3119_8_37 HAC, VML | ||||
| Candida palmioleophila | Yeast-like fungus | 2 | Yes | 69 PIM, MY00850_07 ERL, MY938_07 ERL | ||||
| Candida parapsilosis | Yeast-like fungus | 2 | Yes | 26 PSB, ATCC 22019 THL, DSM 11224 DSM, DSM 4237 DSM, DSM 5784T DSM, DSM 70125 DSM, DSM 70126 DSM, VML, MY924_09 ERL | ||||
| Candida pararugosa | Yeast-like fungus | 2 | Yes | 33 PIM, MY_00389_09 ERL, VML | ||||
| Candida peltata | Yeast-like fungus | 2 | Yes | DSM 70579T DSM | ||||
| Candida pini | Yeast-like fungus | 2 | Yes | DSM 70653T DSM | ||||
| Candida pseudohaemulonii | Yeast | Yes | CBS 10004 CBS, CBS KCTC 17807 CBS, JCM 12453T CBS | |||||
| Candida rugosa | Yeast-like fungus | 2 | Yes | 89 PSB | ||||
| Candida saitoana | Yeast | Yes | CBS 940T CBS | |||||
| Candida sake | Yeast-like fungus | 2 | Yes | DSM 70763 DSM | ||||
| Candida shehatae var insectosa | Yeast | Yes | CBS 4286 CBS | |||||
| Candida sojae | Yeast | Yes | MY333MA 11 ERL, MY333STR 11 ERL | |||||
| Candida solani | Yeast-like fungus | 2 | Yes | DSM 3315 DSM | ||||
| Candida spandovensis | Yeast-like fungus | 2 | Yes | DSM 70866T DSM | ||||
| Candida succiphila | Yeast-like fungus | 2 | Yes | DSM 2149T DSM | ||||
| Candida tropicalis | Yeast-like fungus | 2 | Yes | ATCC 13803 THL, DSM 1346 DSM, DSM 4238 DSM, DSM 5991 DSM, DSM 70151 DSM, DSM 7524 DSM, DSM 9419 DSM, RV_03 VML, VML | ||||
| Candida versatilis | Yeast-like fungus | 2 | Yes | DSM 6956T DSM | ||||
| Candida vini | Yeast-like fungus | 2 | Yes | DSM 70184 DSM | ||||
| Candida viswanathii | Yeast | Yes | CBS 1924 CBS, CBS 4024T CBS, RV5 MY 1 11 ERL | |||||
| Candida zeylanoides | Yeast-like fungus | 2 | Yes | DSM 70185 DSM, VML | ||||
| Candidatus Reyranella massiliensis | Yeast-like fungus | freshwater | 2 | Yes | 125_21 RLT, 181_20 RLT, 3B26_22 RLT | |||
| Candida_cacaoi[ana]# (Pichia_farinosa[teleo]) | Yeast-like fungus | 2 | Yes | DSM 2226T DSM, VML | ||||
| Candida_ciferrii[ana] (Stephanoascus_ciferrii[teleo]#) | Yeast-like fungus | 2 | Yes | DSM 70749 DSM, RV07_02 17 VML | ||||
| Candida_citrea[ana] (Pichia_nakasei[teleo]#) | Yeast | Yes | CBS 5141T CBS | |||||
| Candida_colliculosa[ana] (Torulaspora_delbrueckii[teleo]#) | Yeast-like fungus | 2 | Yes | 901400020 LBK, 901400023 LBK, VML | ||||
| Candida_fabianii[ana] (Pichia_fabianii[teleo]) | Yeast | Yes | CBS 5481T CBS, CBS 5482 CBS, CBS 5640 CBS, CBS 5650 CBS, CBS 6212 CBSMY00875_10 ERL, MY1019_10 ERL, RV5_MY_1_10 ERL | |||||
| Candida_guilliermondii[ana] (Pichia_guilliermondii[teleo]#) | Yeast-like fungus | 2 | Yes | CBS 566 CBS, DSM 11947 DSM, RV490_Feb09_02 PSB, VML, MY970_1_09 ERL | ||||
| Candida_guilliermondii_var_membranaefaciens[ana] (Pichia_ohmeri[teleo]#) | Yeast-like fungus | 2 | Yes | DSM 70813 DSM, DSM 70815 DSM | ||||
| Candida_holmii[ana] (Kazachstania_exigua[teleo]) | Yeast | Yes | CBS 135NT CBS | |||||
| Candida_kefyr[ana] (Kluyveromyces_marxianus[teleo]#) | Yeast-like fungus | 2 | Yes | DSM 70073 DSM, DSM 70106 DSM | ||||
| Candida_kefyr[ana] (Kluyveromyces_marxianus_ssp_marxianus[teleo]#) | Yeast-like fungus | 2 | Yes | CBS 834 CBS | ||||
| Candida_kefyr[ana]# (Kluyveromyces_marxianus[teleo]) | Yeast-like fungus | 2 | Yes | 41 PSB, VML | ||||
| Candida_krusei[ana] (Issatchenkia_orientalis[teleo]#) | Yeast-like fungus | 2 | Yes | DSM 11956 DSM, DSM 6128 DSM, DSM 70075 DSM, DSM 70079 DSM, 36 PSB | ||||
| Candida_krusei[ana]# (Issatchenkia_orientalis[teleo]) | Yeast-like fungus | 2 | Yes | ATCC 14243 THL, ATCC 6258 THL, ATCC 6258 VML, RV491_Sep09_D LBK | ||||
| Candida_lambica[ana] (Pichia_fermentans[teleo]#) | Yeast-like fungus | 2 | Yes | DSM 70090 DSM, DSM 70095 DSM | ||||
| Candida_lambica[ana] (Pichia_fermentans_ssp_fermentans[teleo]#) | Yeast-like fungus | 2 | Yes | CBS 603 CBS | ||||
| Candida_lambica[ana]# (Pichia_fermentans[teleo]) | Yeast-like fungus | 2 | Yes | RV490_Oct09_02 LBK, MY568_09 ERL | ||||
| Candida_lipolytica[ana] (Yarrowia_lipolytica[teleo]#) | Yeast-like fungus | 2 | Yes | DSM 1345 DSM, DSM 3286 DSM, DSM 70561 DSM, DSM 70562 DSM, DSM 8218 DSM, VML | ||||
| Candida_lusitaniae[ana] (Clavispora_lusitaniae[teleo]#) | Yeast-like fungus | 2 | Yes | 45 PSB, 51 PIM, CBS 4413T CBS, VML, DSM 70102 DSM | ||||
| Candida_norvegensis[ana] (Pichia_norvegensis[teleo]#) | Yeast-like fungus | 2 | Yes | 87 PSB, 98 PSB, 993800278 LBK, DSM 70760 DSM, RV_3_2006 VML, MY140_10 ERL | ||||
| Candida_pelliculosa[ana] (Pichia_anomala[teleo]#) | Yeast-like fungus | 2 | Yes | DSM 70130 DSM, DSM 70260 DSM, MY_00164_09 ERL | ||||
| Candida_pintolopseii[ana] (Kazachstania_pintolopesii[teleo]) | Yeast | Yes | CBS 2985T CBS, CBS 3045 CBS | |||||
| Candida_pulcherrima[ana] (Metschnikowia_pulcherrima[teleo]#) | Yeast-like fungus | 2 | Yes | CBS 2244 PAH, DSM 70336 DSM, VML | ||||
| Candida_reukaufii[ana] (Metschnikowia_reukaufii[teleo]#) | Yeast-like fungus | 2 | Yes | DSM 70880 VML | ||||
| Candida_slooffiae[ana]# (Kazachstania_slooffiae[teleo]) | Yeast-like fungus | 2 | Yes | 01 VML | ||||
| Candida_sorbosa[ana] (Issatchenkia_occidentalis[teleo]#) | Yeast-like fungus | 2 | Yes | CBS 1910 CBS | ||||
| Candida_sphaerica[ana] (Kluyveromyces_lactis[teleo]#) | Yeast-like fungus | 2 | Yes | 900400310 LBK, 70 PIM, MY166_10 ERL | ||||
| Candida_thermophila[ana]# (Ogataea_thermophila[teleo]) | Yeast-like fungus | 2 | Yes | VML | ||||
| Candida_utilis[ana]# (Pichia_jandinii[teleo]) | Yeast-like fungus | 2 | Yes | DSM 2361 DSM, DSM 70163 DSM, DSM 70167 DSM | ||||
| Candida_valida[ana] (Pichia_membranifaciens[teleo]#) | Yeast-like fungus | 2 | Yes | 10 LBK | ||||
| Candida_valida[ana] (Pichia_membranifaciens[teleo]#) | Yeast-like fungus | 2 | Yes | 901400022 LBK, DSM 70169 DSM, DSM 70179 DSM | ||||
| Capnocytophaga canimorsus | Infections from dog bites, septicemia | Gram-, filamentous rods, facultative aerobe | blood, oral cavity of dogs | 2 | Yes | DSM 19204T DSM | ||
| Capnocytophaga cynodegmi | Infections from dog bites, septicemia | Gram-, filamentous rods, facultative aerobe | oral cavity of dogs | 2 | Yes | DSM 19736T DSM | ||
| Capnocytophaga gingivalis | Gram-, filamentous rods, facultative aerobe | oral cavity | 2 | Yes | DSM 3290T DSM, 110706_D9 LUMC, 1V12049207_3e MVD, P4bue_re6AN USH, P4flue_re3AN USH, P8flue_re3AN USH | |||
| Capnocytophaga granulosa | dental plaque | Gram-, filamentous rods, facultative aerobe | oral cavity | 2 | Yes | DSM 11449T DSM, P3bue_li10AN USH | ||
| Capnocytophaga haemolytica | dental plaque | Gram-, filamentous rods, facultative aerobe | oral cavity | 2 | Yes | DSM 11385T DSM | ||
| Capnocytophaga leadbetteri | Gram-, filamentous rods, facultative aerobe | 2 | No | |||||
| Capnocytophaga ochracea | Gram-, filamentous rods, facultative aerobe | oral cavity | 2 | Yes | DSM 7271T DSM, DSM 7272 DSM | |||
| Capnocytophaga sp | Gram-, filamentous rods, facultative aerobe | 2 | Yes | G18141 IBS, 110706_F4 LUMC | ||||
| Capnocytophaga sputigena | Gram-, filamentous rods, facultative aerobe | oral cavity | 2 | Yes | DSM 7273T DSM, RV412_A2_09_05 LBK, 110706_E4 LUMC, 110706_E5 LUMC, 110706_F6 LUMC | |||
| Cardiobacterium hominis | endocarditis | gram-, rod highly pleomorphic and irregularly staining | blood, respiratory tract | 2 | Yes | DSM 8339T DSM | ||
| Cardiobacterium sp. | endocarditis | gram-, rod highly pleomorphic and irregularly staining | blood, respiratory tract | 2 | Yes | H42036_3 CHOA | ||
| Cardiobacterium valvarum | endocarditis | gram-, rod highly pleomorphic and irregularly staining | blood, respiratory tract | 2 | Yes | DSM 17211T DSM | ||
| Carnobacterium alterfunditum | Gram+, anaerobe rods | meat | 1 | No | ||||
| Carnobacterium divergens | Gram+, anaerobe rods | meat | 1 | No | ||||
| Carnobacterium funditum | Gram+, anaerobe rods | meat | 1 | No | ||||
| Carnobacterium gallinarum | Gram+, anaerobe rods | meat | 1 | No | ||||
| Carnobacterium inhibens | Gram+, anaerobe rods | meat | 1 | No | ||||
| Carnobacterium joetgali | Gram+, anaerobe rods | meat | 1 | No | ||||
| Carnobacterium maltaromaticum | fish pathogen | Gram+, anaerobe rods | milk | 1 | Yes | DSM 20342T DSM, CIP 102035 CIP, M23 101342 CIP | ||
| Carnobacterium mobile | Gram+, anaerobe rods | meat | 1 | No | ||||
| Carnobacterium pleistocenium | Gram+, anaerobe rods | meat | 1 | No | ||||
| Carnobacterium viridans | Gram+, anaerobe rods | meat | 1 | No | ||||
| Castellaniella caeni | Gram-, facultatively anaerobic, rods | No | ||||||
| Castellaniella daejeonensis | Gram-, facultatively anaerobic, rods | No | ||||||
| Castellaniella defragrans | Gram-, facultatively anaerobic, rods | Yes | DSM 12141T DSM, DSM 12141T HAM, DSM 12142 DSM, DSM 12143 DSM, DSM 12144 DSM | |||||
| Castellaniella denitrificans | Gram-, facultatively anaerobic, rods | No | ||||||
| Castellaniella ginsengisoli | Gram-, facultatively anaerobic, rods | No | ||||||
| Caulobacter fusiformis | Gram-, rod-like, heterotrophic aerobe, asymmetrically dividing | Water | 1 | No | ||||
| Caulobacter ginsengisoli | Gram-, rod-like, heterotrophic aerobe, asymmetrically dividing | Water | 1 | No | ||||
| Caulobacter henricii | Gram-, rod-like, heterotrophic aerobe, asymmetrically dividing | Water | 1 | No | ||||
| Caulobacter leidyi | Gram-, rod-like, heterotrophic aerobe, asymmetrically dividing | Water | 1 | No | ||||
| Caulobacter mirabilis | Gram-, rod-like, heterotrophic aerobe, asymmetrically dividing | Water | 1 | No | ||||
| Caulobacter segnis | Gram-, rod-like, heterotrophic aerobe, asymmetrically dividing | Water | 1 | No | ||||
| Caulobacter sp | Gram-, rod-like, heterotrophic aerobe, asymmetrically dividing | Water | 1 | Yes | %5B2%5D 101220_44166 BRB | |||
| Caulobacter vibrioides | Gram-, rod-like, heterotrophic aerobe, asymmetrically dividing | Water | 1 | Yes | LB_101494_09 ERL | |||
| Cedecea davisae | Opportunistic infections | Gram-, rods, motile, non spore forming | sputum, blood, skin wounds, gall bladder, urine and lung tissue | 2 | Yes | DSM 4568T HAM | ||
| Cedecea lapagei | Opportunistic infections | Gram-, rods, motile, non spore forming | sputum, blood, skin wounds, gall bladder, urine and lung tissue | 2 | Yes | DSM 4587T HAM | ||
| Cedecea neteri | Opportunistic infections | Gram-, rods, motile, non spore forming | sputum, blood, skin wounds, gall bladder, urine and lung tissue | 2 | Yes | DSM 13693T HAM | ||
| Cellulomonas aerilata | Gram+, rods | soil | 1 | No | ||||
| Cellulomonas biazotea | Gram+, rods | soil | 1 | No | ||||
| Cellulomonas bogoriensis | Gram+, rods | No | ||||||
| Cellulomonas chitinilytica | Gram+, rods | No | ||||||
| Cellulomonas composti | Gram+, rods | soil | 1 | No | ||||
| Cellulomonas denverensis | Gram+, rods | blood | 2 | No | ||||
| Cellulomonas fimi | Gram+, rods | soil | 1 | Yes | DSM 20114 DSM | |||
| Cellulomonas flavigena | Gram+, rods | 1 | Yes | B194 UFL | ||||
| Cellulomonas gelida | Gram+, rods | soil | 1 | Yes | IMET 11078 HKJ | |||
| Cellulomonas hominis | Gram+, rods | cerebrospinal fluid | 2 | No | ||||
| Cellulomonas humilata | Gram+, rods | soil | 2 | No | ||||
| Cellulomonas iranensis | Gram+, rods | soil | 1 | No | ||||
| Cellulomonas persica | Gram+, rods | soil | 1 | No | ||||
| Cellulomonas phragmiteti | Gram+, rods | No | ||||||
| Cellulomonas terrae | Gram+, rods | soil | 1 | No | ||||
| Cellulomonas uda | Gram+, rods | soil | 1 | Yes | HKI 11495 HKJ | |||
| Cellulomonas xylanilytica | Gram+, rods | soil | 1 | No | ||||
| Cellulosimicrobium cellulans | Yes | B480 UFL, DSM 20155 DSM | ||||||
| Cellulosimicrobium funkei | No | |||||||
| Cellulosimicrobium terreum | No | |||||||
| Chaetomium atrobrunneum | Infections in immunocompromized patients | Fungus | soil, plant debris, air | 1 | No | |||
| Chaetomium funicola | Fungus | soil, plant debris, air | 1 | No | ||||
| Chaetomium globosum | Brain abscess, peritonitis, onychomycosis | Fungus | soil, plant debris, air | 1 | Yes | RVD_08I VML | ||
| Chaetomium murorum | Fungus | soil, plant debris, air | 1 | No | ||||
| Chlamydia muridarum | Obligate intracellular, Gram- | mice, hamsters | 2 | No | ||||
| Chlamydia suis | Conjunctivitis, enteritis and pneumonia in swine | Obligate intracellular, Gram- | swine | 2 | No | |||
| Chlamydophila aboruts | Abortion and fetal death | Obligate intracellular, Gram- | Fetuses | 2 | No | |||
| Chlamydophila caviae | Conjunctiva of guinea pigs | Obligate intracellular, Gram- | eye discharge | 2 | No | |||
| Chlamydophila felis | Feline pneumonia | Obligate intracellular, Gram- | Lung of feline, human lungs | 2 | No | |||
| Chlamydophila pecorum | Abortion, conjunctivitis, pneumonia | Obligate intracellular, Gram- | cattle, sheep, koalas and swine | 2 | No | |||
| Chlamydophila pneumoniae | Pneumonia | Obligate intracellular, Gram- | Lungs | 2 | No | null | null | null |
| Chromobacterium aquaticum | Gram- rods | No | ||||||
| Chromobacterium haemolyticum | Gram- rods | No | ||||||
| Chromobacterium piscinae | Gram- rods | No | ||||||
| Chromobacterium pseudoviolaceum | Gram- rods | No | ||||||
| Chromobacterium subtsugae | Gram- rods | Yes | DSM 17043T DSM | |||||
| Chromobacterium violaceum | Gram- rods | Yes | C49 MVO, DSM 30191T DSM | |||||
| Chromohalobacter beijerimckii | Gram-, rod-like motile | No | ||||||
| Chromohalobacter canadensis | Gram-, rod-like motile | No | ||||||
| Chromohalobacter israelensis | Gram-, rod-like motile | No | ||||||
| Chromohalobacter japonicus | Gram-, rod-like motile | No | ||||||
| Chromohalobacter marismortui | Gram-, rod-like motile | No | ||||||
| Chromohalobacter nigrandesensis | Gram-, rod-like motile | No | ||||||
| Chromohalobacter salexigens | Gram-, rod-like motile | Yes | B570 UFL | |||||
| Chromohalobacter sarecensis | Gram-, rod-like motile | No | ||||||
| Chryptotrichosporon anacardii | Yeast | Yes | CBS 9551T CBS, CBS 9550 CBS | |||||
| Chryseobacterium antarcticum | Gram- bacilli. | No | ||||||
| Chryseobacterium anthropi | Gram- bacilli. | No | ||||||
| Chryseobacterium aquaticum | Gram- bacilli. | No | ||||||
| Chryseobacterium aquifrigidense | Gram- bacilli. | No | ||||||
| Chryseobacterium arthrosphaerae | Gram- bacilli. | No | ||||||
| Chryseobacterium balustinum | Gram- bacilli. | No | ||||||
| Chryseobacterium bovis | Gram- bacilli. | No | ||||||
| Chryseobacterium caeni | Gram- bacilli. | No | ||||||
| Chryseobacterium chaponense | Gram- bacilli. | No | ||||||
| Chryseobacterium culicis | Gram- bacilli. | No | ||||||
| Chryseobacterium daecheongense | Gram- bacilli. | No | ||||||
| Chryseobacterium daeguense | Gram- bacilli. | No | ||||||
| Chryseobacterium defluvii | Gram- bacilli. | No | ||||||
| Chryseobacterium elymi | Gram- bacilli. | No | ||||||
| Chryseobacterium flavum | Gram- bacilli. | No | ||||||
| Chryseobacterium formosense | Gram- bacilli. | No | ||||||
| Chryseobacterium gambrini | Gram- bacilli. | No | ||||||
| Chryseobacterium ginsenosidimutans | Gram- bacilli. | Yes | CIP 110378 CIP | |||||
| Chryseobacterium gleum | Gram- bacilli. | No | H42703 CHOA, T25198_2 CHOA | |||||
| Chryseobacterium greenlandense | Gram- bacilli. | No | ||||||
| Chryseobacterium gregarium | Gram- bacilli. | No | ||||||
| Chryseobacterium hagamense | Gram- bacilli. | Yes | CIP 110400 CIP | |||||
| Chryseobacterium haifense | Gram- bacilli. | No | ||||||
| Chryseobacterium hispanicum | Gram- bacilli. | No | ||||||
| Chryseobacterium homins | Gram- bacilli. | Yes | 456 RLT | |||||
| Chryseobacterium humi | Gram- bacilli. | No | ||||||
| Chryseobacterium hungaricum | Gram- bacilli. | No | ||||||
| Chryseobacterium indologenes | Gram- bacilli. | Yes | 098_NEB37 NFI, CCM 4451T CCM | |||||
| Chryseobacterium indoltheticum | Gram- bacilli. | No | ||||||
| Chryseobacterium jejuense | Gram- bacilli. | No | ||||||
| Chryseobacterium jeonii | Gram- bacilli. | No | ||||||
| Chryseobacterium joostei | Gram- bacilli. | Yes | LMG 18212T HAM | |||||
| Chryseobacterium koreense | Gram- bacilli. | No | ||||||
| Chryseobacterium lathyri | Gram- bacilli. | No | ||||||
| Chryseobacterium luteum | Gram- bacilli. | No | ||||||
| Chryseobacterium marinum | Gram- bacilli. | No | ||||||
| Chryseobacterium molle | Gram- bacilli. | No | ||||||
| Chryseobacterium oncorhynchi | Gram- bacilli. | No | ||||||
| Chryseobacterium oranimense | Gram- bacilli. | Yes | 901900074 LBK | |||||
| Chryseobacterium pallidum | Gram- bacilli. | No | ||||||
| Chryseobacterium palustre | Gram- bacilli. | No | ||||||
| Chryseobacterium piperi | Gram- bacilli. | No | ||||||
| Chryseobacterium piscicola | Gram- bacilli. | No | ||||||
| Chryseobacterium piscium | Gram- bacilli. | No | ||||||
| Chryseobacterium rhizosphaerae | Gram- bacilli. | No | ||||||
| Chryseobacterium scophthalmum | Gram- bacilli. | Yes | LMG 13028T HAM | |||||
| Chryseobacterium shigense | Gram- bacilli. | No | ||||||
| Chryseobacterium soldanellicola | Gram- bacilli. | No | ||||||
| Chryseobacterium soli | Gram- bacilli. | No | ||||||
| Chryseobacterium solincola | Gram- bacilli. | No | ||||||
| Chryseobacterium sp | Gram- bacilli. | Yes | 107 PIM | |||||
| Chryseobacterium taeanense | Gram- bacilli. | No | ||||||
| Chryseobacterium taichungense | Gram- bacilli. | No | ||||||
| Chryseobacterium taiwanense | Gram- bacilli. | No | ||||||
| Chryseobacterium treverense | Gram- bacilli. | No | ||||||
| Chryseobacterium ureilyticum | Gram- bacilli. | No | ||||||
| Chryseobacterium vietnamense | Gram- bacilli. | No | ||||||
| Chryseobacterium vrystaatense | Gram- bacilli. | No | ||||||
| Chryseobacterium wanjuense | Gram- bacilli. | No | ||||||
| Chryseobacterium xinjiangense | Gram- bacilli. | No | ||||||
| Chryseobacterium yonginense | Gram- bacilli. | No | ||||||
| Citrobacter amalonaticus | Yes | DSM 4593T HAM, CCM 4706 CCM | ||||||
| Citrobacter braakii | Yes | 20663_2 CHB, 9314_2 CHB | ||||||
| Citrobacter farmeri | Yes | DSM 17655T HAM | ||||||
| Citrobacter freundii | Yes | DSM 30039T HAM, DSM 15979 DSM, 22054_1 CHB, 13158_2 CHB | ||||||
| Citrobacter gillenii | Yes | DSM 13694T HAM | ||||||
| Citrobacter koseri | Yes | Mu15167_1 CHB, MB_8260_05 THL, DSM 4596 DSM, DSM 4595T HAM, DSM 4570 DSM, 9553_1 CHB | ||||||
| Citrobacter murliniae | Yes | DSM 13695T HAM | ||||||
| Citrobacter rodentium | Yes | DSM 16636T HAM | ||||||
| Citrobacter sedlakii | Yes | IBS_MS_10 IBS, DSM 17674T HAM | ||||||
| Citrobacter werkamnii | No | |||||||
| Citrobacter youngae | gram-negative Enterobacteriaceae | water, soil, food, and the intestinal tracts of animals and humans. | Yes | DSM 17578T HAM | ||||
| Clavibacter michiganensis | No | |||||||
| Clavibacter michiganensis ssp insidiosus | No | |||||||
| Clavibacter michiganensis ssp michiganensis | No | |||||||
| Clavibacter michiganensis ssp nebraskensis | No | |||||||
| Clavibacter michiganensis ssp sepedonicus | No | |||||||
| Clavibacter michiganensis ssp tessellarius | Yes | DSM 20741T DSM | ||||||
| Clostridium aceticum | Gram+, strictly anaerobic, endospore producing, rods | Mud | 1 | No | ||||
| Clostridium acetireducens | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium acetobutylicum | Gram+, strictly anaerobic, endospore producing, rods | Plants | 1 | Yes | DSM 792T VML, DSM 1731 DSM, DSM 1737 DSM, DSM 1738 DSM | |||
| Clostridium acidisoli | Gram+, strictly anaerobic, endospore producing, rods | soil | 1 | No | ||||
| Clostridium aciditolerans | Gram+, strictly anaerobic, endospore producing, rods | 1 | Yes | DSM 17425T DSM | ||||
| Clostridium acidurici | Gram+, strictly anaerobic, endospore producing, rods | soil | 1 | No | ||||
| Clostridium aerotolerans | Gram+, strictly anaerobic, endospore producing, rods | sheep | 1 | Yes | DSM 5434T DSM | |||
| Clostridium aestuarii | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium akagii | Gram+, strictly anaerobic, endospore producing, rods | soil | 1 | No | ||||
| Clostridium alcalibutyricum | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium alcaliphilum | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium aldrichii | Gram+, strictly anaerobic, endospore producing, rods | Yes | DSM 19262T DSM | |||||
| Clostridium algidicarnis | Gram+, strictly anaerobic, endospore producing, rods | Yes | DSM 15099T DSM | |||||
| Clostridium algidixylanolyticum | Gram+, strictly anaerobic, endospore producing, rods | spoiled lamb meat | 1 | Yes | DSM 12273T DSM | |||
| Clostridium algoriphilum | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium alkalicellulosi | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium aminobutyricum | Gram+, strictly anaerobic, endospore producing, rods | 1 | No | |||||
| Clostridium aminophilum | Gram+, strictly anaerobic, endospore producing, rods | cattle | 1 | Yes | DSM 10710T DSM | |||
| Clostridium aminovalericum | Gram+, strictly anaerobic, endospore producing, rods | Soil, sludge | 1 | No | ||||
| Clostridium amygdalinum | Gram+, strictly anaerobic, endospore producing, rods | sludge | 1 | No | ||||
| Clostridium amylolyticum | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium arbusti | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium arcticum | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium argentinense | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium asparagiforme | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium aurantibutyricum | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium autoethanogenum | Gram+, strictly anaerobic, endospore producing, rods | 1 | No | |||||
| Clostridium baratii | Botulism | Gram+, strictly anaerobic, endospore producing, rods | Yes | 1018_NCTC 10986 BOG, 1084_ATCC 25782 BOG | ||||
| Clostridium bartlettii | Gram+, strictly anaerobic, endospore producing, rods | Yes | DSM 16795T DSM | |||||
| Clostridium beijerinckii | Gram+, strictly anaerobic, endospore producing, rods | 1 | Yes | 1011_DSM 552 BOG, 1072_ATCC 25752T BOG | ||||
| Clostridium bifermentans | Gram+, strictly anaerobic, endospore producing, rods | 1 | Yes | DSM 630 DSM, 2274_CCUG 35556 A BOG, 2273_CCUG 35297 BOG, 1027_NCTC 1341 BOG, AB_2 LGL | ||||
| Clostridium bogorii | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium boliviensis | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium bolteae | Gram+, strictly anaerobic, endospore producing, rods | feces | 2 | Yes | DSM 15670T DSM | |||
| Clostridium botulinum | Botulism | Gram+, strictly anaerobic, endospore producing, rods | 2 | Yes | G 2270_Spanien 4615_BOG, G 1073_ATCC 27322_BOG, A 2295_ NewZealand 35ka29_BOG, A 2292_NewZealand 4997_BOG, A 2276_Schweden 7735_BOG, A 2267_Spanien 551_BOG, A 1028_NCTC 7272_BOG, B 2293_NewZealand 75-3074_BOG, B 2269 Spanien 4610_BOG, B 1740_CMM 27_2_BOG, B 1029_NCTC 7273_BOG, C2_2256_Holland A028_BOG, C1_2257_Holland 468C_BOG, C 2294_NewZealand 5295_BOG, C 2145_Erfurt REB 1455_BOG, C 1030_NCTC 8264_BOG, D 2142_Pasteur 1873-D_BOG, D 1739_ATCC 9633_BOG, D 1031_NCTC 8265_BOG, E 2271_Spanien 4611_BOG, E 1032_NCTC 8266_BOG, F 2297_NewZealand 83-4304_BOG, F 2272_Spanien 4612_BOG, F 1033_NCTC 10281_BOG | |||
| Clostridium bovipellis | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium bowmanii | Gram+, strictly anaerobic, endospore producing, rods | antarctic freshwater lake mud | 1 | No | ||||
| Clostridium butyricum | Botulism | Gram+, strictly anaerobic, endospore producing, rods | Sheep, blood | 1 | Yes | DSM 2478 DSM, DSM 10702T DSM, 900200369 LBK, 21951 RLH | ||
| Clostridium cadaveris | Gram+, strictly anaerobic, endospore producing, rods | 1 | Yes | DSM 1284T DSM, 1074_ATCC 25783T BOG | ||||
| Clostridium caenicola | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium caminithermale | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium carboxidivorans | Gram+, strictly anaerobic, endospore producing, rods | soil | 1 | Yes | DSM 15243T DSM | |||
| Clostridium carnis | Gram+, strictly anaerobic, endospore producing, rods | Meat | 2 | Yes | DSM 1293T DSM | |||
| Clostridium cavendishii | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium celatum | Gram+, strictly anaerobic, endospore producing, rods | feces | 1 | No | ||||
| Clostridium celerecrescens | Gram+, strictly anaerobic, endospore producing, rods | Yes | DSM 5628T DSM, 52 PIM | |||||
| Clostridium cellobioparum | Gram+, strictly anaerobic, endospore producing, rods | cattle | 1 | Yes | DSM 1351T DSM | |||
| Clostridium cellulofermentans | Gram+, strictly anaerobic, endospore producing, rods | 1 | No | |||||
| Clostridium cellulolyticum | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium cellulosi | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium cellulovorans | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium chartatabidum | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium chauvoei | Gram+, strictly anaerobic, endospore producing, rods | Sheep, Cattle | 2 | Yes | 1023_NCTC 8070 BOG, 1024_NCTC 8596 BOG, 1076_ATCC 10092T BOG | |||
| Clostridium chromiireducens | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium citroniae | Gram+, strictly anaerobic, endospore producing, rods | peritoneal fluid | 2 | Yes | DSM 19261T DSM | |||
| Clostridium clariflavum | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium clostridioforme | Opportunistic infections | Gram-, strictly anaerobic, endospore producing, rods | Cattle, feces | 1 | Yes | DSM 933T DSM, 1021_NCTC 11224T BOG, 110706_G8 LUMC | ||
| Clostridium cochlearium | Gram+, strictly anaerobic, endospore producing, rods | 1 | Yes | DSM 2153 VML, DSM 666 VML, 1077_ATCC 17787T BOG, 1050_NCTC 2909 BOG, DSM 1285T VML, 1080_ATCC 17794T BOG | ||||
| Clostridium colicanis | Gram+, strictly anaerobic, endospore producing, rods | Yes | DSM 13634T VML | |||||
| Clostridium colinum | Ulcerative colitis in chicken | Gram+, strictly anaerobic, endospore producing, rods | Chicken | 1 | Yes | DSM 6011T DSM | ||
| Clostridium collagenovorans | Gram+, strictly anaerobic, endospore producing, rods | sludge | 1 | Yes | DSM 3089T DSM | |||
| Clostridium cylindrosporum | Gram+, strictly anaerobic, endospore producing, rods | 1 | No | |||||
| Clostridium difficile | Antibiotic associated diarreha, pseudomembranous colitis | Gram+, strictly anaerobic, endospore producing, rods | feces | 2 | Yes | 0422_0288_DM IBS, 1020_NCTC 11206 BOG, DSM 12057 DSM, DSM 1296T DSM, MB_1562_05 THL, MB_2559_05 THL, MB_294_05 THL, MB_4499_05 THL, MB_7476_05 THL, MB_7869_05 THL | ||
| Clostridium diolis | Gram+, strictly anaerobic, endospore producing, rods | plants | 1 | Yes | DSM 15410T DSM | |||
| Clostridium disporicum | Gram+, strictly anaerobic, endospore producing, rods | rat colon, rat feces | 1 | Yes | DSM 5521T DSM | |||
| Clostridium drakei | Gram+, strictly anaerobic, endospore producing, rods | sediments | 1 | Yes | DSM 12750T DSM | |||
| Clostridium estertheticum ssp. estertheticum | Gram+, strictly anaerobic, endospore producing, rods | beef meat | 1 | No | ||||
| Clostridium estertheticum ssp. laramiense | Gram+, strictly anaerobic, endospore producing, rods | spoiled meat | 1 | No | ||||
| Clostridium fallax | Gram+, strictly anaerobic, endospore producing, rods | 1 | Yes | DSM 2631T DSM | ||||
| Clostridium felsineum | Gram+, strictly anaerobic, endospore producing, rods | Soil | 1 | No | ||||
| Clostridium filamentosum | Gram+, strictly anaerobic, endospore producing, rods | 1 | No | |||||
| Clostridium fimetarium | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium formicaceticum | Gram+, strictly anaerobic, endospore producing, rods | Mud | 1 | Yes | DSM 92T DSM | |||
| Clostridium frigidicarnis | Gram+, strictly anaerobic, endospore producing, rods | raw beef meat | 1 | No | ||||
| Clostridium frigoris | Gram+, strictly anaerobic, endospore producing, rods | antarctic freshwater lake mud | 1 | Yes | DSM 14204T DSM | |||
| Clostridium ganghwense | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium gasigenes | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium ghonii | Gram+, strictly anaerobic, endospore producing, rods | 1 | Yes | DSM 15049T DSM | ||||
| Clostridium glycolicum | Gram+, strictly anaerobic, endospore producing, rods | Soil | 1 | Yes | 203246 RLH, DSM 13561 DSM, 100617_23 PNU, 100617_52 PNU | |||
| Clostridium glycyrrhizinilyticum | Gram+, strictly anaerobic, endospore producing, rods | Yes | DSM 17593T DSM | |||||
| Clostridium grantii | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium haemolyticum | Gram+, strictly anaerobic, endospore producing, rods | Yes | 1069_ATCC 9650T BOG | |||||
| Clostridium halophilum | Gram+, strictly anaerobic, endospore producing, rods | Soil | 1 | Yes | DSM 5387T DSM | |||
| Clostridium hathewayi | Gram+, strictly anaerobic, endospore producing, rods | Yes | DSM 13479T DSM, DSM 13480 DSM, HU52042 PNU, 15_759 IBS | |||||
| Clostridium herbivorans | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium hiranonis | Gram+, strictly anaerobic, endospore producing, rods | Yes | DSM 13275T DSM | |||||
| Clostridium histolyticum | Gas gangrene | Gram+, strictly anaerobic, endospore producing, rods | Gangrene tissue | 2 | Yes | 1036_NCTC 503T BOG, DSM 1126 DSM, DSM 2158T DSM | ||
| Clostridium homopropionicum | Gram+, strictly anaerobic, endospore producing, rods | sludge | 1 | Yes | DSM 5847T DSM | |||
| Clostridium hungatei | Gram+, strictly anaerobic, endospore producing, rods | soil | 1 | No | ||||
| Clostridium hydrogeniformans | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium hylemonae | Gram+, strictly anaerobic, endospore producing, rods | Yes | DSM 15053T DSM | |||||
| Clostridium indolis | Gram+, strictly anaerobic, endospore producing, rods | Soil | 1 | Yes | DSM 755T DSM | |||
| Clostridium innocuum | Opportunistic infections | Gram+, strictly anaerobic, endospore producing, rods | Abscess | 1 | Yes | 1079_ATCC 14501T BOG, 25_389 IBS, DSM 1286T DSM, HU46588 PNU, HU56448 PNU | ||
| Clostridium intestinale | Gram+, strictly anaerobic, endospore producing, rods | feces | 1 | Yes | DSM 16614 DSM, DSM 6191T DSM | |||
| Clostridium irregulare | Gram+, strictly anaerobic, endospore producing, rods | 1 | Yes | DSM 2635T VML | ||||
| Clostridium isatidis | Gram+, strictly anaerobic, endospore producing, rods | Yes | DSM 15098T_1 VML | |||||
| Clostridium jejuense | Gram+, strictly anaerobic, endospore producing, rods | Yes | DSM 15929T DSM | |||||
| Clostridium josui | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium kluyveri | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium lactatifermentans | Gram+, strictly anaerobic, endospore producing, rods | Yes | DSM 14214T DSM | |||||
| Clostridium lacusfryxellense | Gram+, strictly anaerobic, endospore producing, rods | antarctic freshwater lake mud | 1 | No | ||||
| Clostridium lavalense | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium lentocellum | Gram+, strictly anaerobic, endospore producing, rods | Feces | 1 | Yes | DSM 5427T DSM | |||
| Clostridium leptum | Gram+, strictly anaerobic, endospore producing, rods | Feces | 1 | No | ||||
| Clostridium limosum | Gram+, strictly anaerobic, endospore producing, rods | Mud | 1 | Yes | DSM 1400T DSM | |||
| Clostridium litorale | Gram+, strictly anaerobic, endospore producing, rods | marine sediments | 1 | No | ||||
| Clostridium lituseburense | Gram+, strictly anaerobic, endospore producing, rods | 1 | No | |||||
| Clostridium ljungdahlii | Gram+, strictly anaerobic, endospore producing, rods | water well | 1 | No | ||||
| Clostridium lundense | Gram+, strictly anaerobic, endospore producing, rods | Yes | DSM 17049T VML | |||||
| Clostridium magnum | Gram+, strictly anaerobic, endospore producing, rods | freshwater sediments | 1 | Yes | DSM 13769 DSM | |||
| Clostridium malenominatum | Subgingival plaque | Gram+, strictly anaerobic, endospore producing, rods | Mouth | 1 | Yes | DSM 1127T DSM | ||
| Clostridium mangenotii | Gram+, strictly anaerobic, endospore producing, rods | 1 | No | |||||
| Clostridium mayombei | Gram+, strictly anaerobic, endospore producing, rods | termite gut | 1 | Yes | DSM 6539T DSM | |||
| Clostridium methoxybenzovorans | Gram+, strictly anaerobic, endospore producing, rods | soil | 1 | No | ||||
| Clostridium methylpentosum | Gram+, strictly anaerobic, endospore producing, rods | feces | 1 | No | ||||
| Clostridium neopropionicum | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium nexile | Gram+, strictly anaerobic, endospore producing, rods | Feces | 1 | No | ||||
| Clostridium nitrophenolicum | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium novyi | Gas gangrene | Gram+, strictly anaerobic, endospore producing, rods | Gangrene tissue | 2 | Yes | 1082_ATCC 17861T BOG, A 1025_NCTC 538 BOG | ||
| Clostridium oceanicum | Gram+, strictly anaerobic, endospore producing, rods | 1 | No | |||||
| Clostridium oroticum | Gram+, strictly anaerobic, endospore producing, rods | Soil | 1 | No | ||||
| Clostridium papyrosolvens | Gram+, strictly anaerobic, endospore producing, rods | mud | 1 | Yes | DSM 2782T DSM | |||
| Clostridium paradoxum | Gram+, strictly anaerobic, endospore producing, rods | sludge | 1 | No | ||||
| Clostridium paraputrificum | Gram+, strictly anaerobic, endospore producing, rods | Mud | 1 | Yes | 1083_ATCC 17796 BOG, DSM 2630T DSM, DSM 46280 DSM, 110706_B3 LUMC, AB_8 LGL | |||
| Clostridium pascui | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium pasteurianum | Gram+, strictly anaerobic, endospore producing, rods | Plants | 1 | No | ||||
| Clostridium peptidivorans | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium perfringens | Soft tissue infections, food poisoning, enteritis, necroticans, septicemia | Gram+, strictly anaerobic, endospore producing, rods | Blood, feces | 2 | Yes | DSM 11778_3d VML, DSM 11781 VML, DSM 11784 VML, DSM 628 VML, DSM 756T VML, DSM 798 VML, HU51221 PNU, HU65618 PNU, RV_BA_03_D LBK | ||
| Clostridium phytofermentans | Gram+, strictly anaerobic, endospore producing, rods | soil | 1 | Yes | DSM 18823T DSM | |||
| Clostridium polysaccharolyticum | Gram+, strictly anaerobic, endospore producing, rods | Sheep | 1 | No | ||||
| Clostridium populeti | Gram+, strictly anaerobic, endospore producing, rods | 1 | No | |||||
| Clostridium propionicum | Gram+, strictly anaerobic, endospore producing, rods | Mud | 1 | Yes | DSM 1682T DSM, DSM 6251 DSM | |||
| Clostridium proteolyticum | Gram+, strictly anaerobic, endospore producing, rods | chicken manure | 1 | No | ||||
| Clostridium psychrophilum | Gram+, strictly anaerobic, endospore producing, rods | antarctic freshwater lake mud | 1 | No | ||||
| Clostridium puniceum | Gram+, strictly anaerobic, endospore producing, rods | rotting potatoes, soil | 1 | No | ||||
| Clostridium purinilyticum | Gram+, strictly anaerobic, endospore producing, rods | Soil | 1 | No | ||||
| Clostridium putrefaciens | Gram+, strictly anaerobic, endospore producing, rods | 1 | No | |||||
| Clostridium putrificum | Gram+, strictly anaerobic, endospore producing, rods | 1 | Yes | CIP_60.54 DSM | ||||
| Clostridium quinii | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium ramosum | Opportunistic infections | Gram-, strictly anaerobic, endospore producing, rods | Soil, wounds | 1 | Yes | 02_491 IBS, 02_491 N2 IBS, 15_758 IBS, 49 RLT, 94 PIM, DSM 1402T VML, IBS_MS_15 IBS, 470 RLT | ||
| Clostridium rectum | Gram+, strictly anaerobic, endospore producing, rods | 1 | No | |||||
| Clostridium roseum | Gram+, strictly anaerobic, endospore producing, rods | 1 | No | |||||
| Clostridium saccharobutylicum | Gram+, strictly anaerobic, endospore producing, rods | soybeans | 1 | Yes | DSM 13864T DSM | |||
| Clostridium saccharogumia | Gram+, strictly anaerobic, endospore producing, rods | Yes | DSM 17460T DSM | |||||
| Clostridium saccharolyticum | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium saccharoperbutylacetonicum | Gram+, strictly anaerobic, endospore producing, rods | Soil | 1 | No | ||||
| Clostridium sardiniense | Gram+, strictly anaerobic, endospore producing, rods | Soil | 2 | Yes | 1001_NCTC 10984T BOG, DSM 600 DSM | |||
| Clostridium sartagoforme | Gram+, strictly anaerobic, endospore producing, rods | 1 | Yes | 100617_58 PNU, DSM 17125 DSM | ||||
| Clostridium scatologenes | Gram+, strictly anaerobic, endospore producing, rods | 1 | No | |||||
| Clostridium schirmacherense | Gram+, strictly anaerobic, endospore producing, rods | Yes | DSM 17394T VML | |||||
| Clostridium scindens | Gram+, strictly anaerobic, endospore producing, rods | Feces | 1 | Yes | 15 RLT, DSM 5676T DSM | |||
| Clostridium septicum | gas gangrene, septicemia | Gram+, strictly anaerobic, endospore producing, rods | Blood | 2 | Yes | 1026_NCTC 547T BOG, DSM 7534T_1 VML, GD77 GDD | ||
| Clostridium sordellii | Gas gangrene, septic shock syndrome | Gram+, strictly anaerobic, endospore producing, rods | blood,gangrene tissue | 2 | Yes | 1070_ATCC 9714T BOG, DSM 2141T VML | ||
| Clostridium sp | Gram+, strictly anaerobic, endospore producing, rods | Yes | DSM 1975 VML, 110324_103 PNU, 110324_14 PNU, 110324_53 PNU, DSM 13576 DSM, DSM 17592T DSM, DSM 5906 DSM | |||||
| Clostridium sphenoides | Gram+, strictly anaerobic, endospore producing, rods | 1 | Yes | 1046_NCTC 507T BOG, DSM 1225 VML, DSM 614 VML, DSM 632T VML | ||||
| Clostridium spiroforme | Gram+, strictly anaerobic, endospore producing, rods | Feces | 1 | Yes | 1047_NCTC 11211T BOG | |||
| Clostridium sporogenes | Opportunistic infections | Gram+, strictly anaerobic, endospore producing, rods | Wounds, soil | 1 | Yes | 992800235 LBK, DSM 1734 VML, DSM 46278 VML, DSM 46279 VML, DSM 633 VML, DSM 795T VML | ||
| Clostridium sporosphaeroides | Gram+, strictly anaerobic, endospore producing, rods | Wounds, soil | 1 | Yes | DSM 1294T VML | |||
| Clostridium sp[2] | Gram+, strictly anaerobic, endospore producing, rods | Yes | 0807M290672 IBS | |||||
| Clostridium stercorarium ssp. leptospartum | Gram+, strictly anaerobic, endospore producing, rods | 1 | No | |||||
| Clostridium stercorarium ssp. stercorarium | Gram+, strictly anaerobic, endospore producing, rods | Compost | 1 | No | ||||
| Clostridium stercorarium ssp. thermolacticum | Gram+, strictly anaerobic, endospore producing, rods | 1 | No | |||||
| Clostridium sticklandii | Gram+, strictly anaerobic, endospore producing, rods | 1 | No | |||||
| Clostridium straminisolvens | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium subterminale | Gram+, strictly anaerobic, endospore producing, rods | sludge | 1 | Yes | DSM 2636 VML, DSM 6970T DSM, DSM 758 VML | |||
| Clostridium sufflavum | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium sulfidigenes | Gram+, strictly anaerobic, endospore producing, rods | soil, sediments | 1 | No | ||||
| Clostridium symbiosum | Gram+, strictly anaerobic, endospore producing, rods | Soil | 1 | Yes | DSM 934T DSM | |||
| Clostridium tagluense | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium tepidiprofundi | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium termitidis | Gram+, strictly anaerobic, endospore producing, rods | termite gut | 1 | No | ||||
| Clostridium tertium | Opportunistic infections | Gram+, strictly anaerobic, endospore producing, rods | Soil | 1 | Yes | 1048_NCTC 541 BOG, 900500287 LBK, DSM 2485T VML, DSM 662 VML, HU46926 PNU, VA10735_10 ERL | ||
| Clostridium tetani | tetanus | Gram+, strictly anaerobic, endospore producing, rods | Feces | 2 | Yes | 1089_ATCC 10779 BOG, DSM 11744 VML, DSM 11745 VML | ||
| Clostridium tetani type 1 | Gram+, strictly anaerobic, endospore producing, rods | Feces | 2 | Yes | 1049_NCTC 279T BOG | |||
| Clostridium tetanomorphum | Gram+, strictly anaerobic, endospore producing, rods | saliva | 1 | No | ||||
| Clostridium thermoalcaliphilum | Gram+, strictly anaerobic, endospore producing, rods | sludge | 1 | No | ||||
| Clostridium thermobutyricum | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium thermocellum | Gram+, strictly anaerobic, endospore producing, rods | 1 | No | |||||
| Clostridium thermopalmarium | Gram+, strictly anaerobic, endospore producing, rods | palm wine | 1 | Yes | DSM 5974T DSM | |||
| Clostridium thermopapyrolyticum | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium thermosuccinogenes | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium thiosulfatireducens | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium tunisiense | Gram+, strictly anaerobic, endospore producing, rods | Yes | DSM 15206T DSM | |||||
| Clostridium tyrobutyricum | Gram+, strictly anaerobic, endospore producing, rods | 1 | No | |||||
| Clostridium uliginosum | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium ultunense | Gram+, strictly anaerobic, endospore producing, rods | biogas reactor | 1 | No | ||||
| Clostridium vincentii | Gram+, strictly anaerobic, endospore producing, rods | No | ||||||
| Clostridium viride | Gram+, strictly anaerobic, endospore producing, rods | sludge | 1 | No | ||||
| Clostridium xylanovorans | Gram+, strictly anaerobic, endospore producing, rods | plants | 1 | Yes | DSM 12503T DSM | |||
| Cohnella arctica | No | |||||||
| Cohnella damuensis | No | |||||||
| Cohnella fontinalis | Yes | QBR_3884 QBC | ||||||
| Cohnella ginsengisoli | No | |||||||
| Cohnella hongkongensis | Yes | DSM 17642T DSM | ||||||
| Cohnella laeviribosi | No | |||||||
| Cohnella luojiensis | No | |||||||
| Cohnella panacarvi | No | |||||||
| Cohnella phaseoli | No | |||||||
| Cohnella soli | No | |||||||
| Cohnella suwonensis | No | |||||||
| Cohnella terrae | No | |||||||
| Cohnella thailandensis | No | |||||||
| Cohnella thermotolerans | No | |||||||
| Cohnella xylanilytica | No | |||||||
| Cohnella yongneupensis | No | |||||||
| Colletotrichum gloeosporioides | Infects plants | fungus | Yes | CBS 100471 CBS | ||||
| Collinsella aerofaciens | Yes | DSM 13712 DSM, DSM 3979T DSM | ||||||
| Collinsella intestinalis | No | |||||||
| Collinsella stercoris | No | |||||||
| Collinsella tanakaei | No | |||||||
| Comamonas aquatica | Yes | LMG 2370T HAM | ||||||
| Comamonas badia | No | |||||||
| Comamonas composti | No | |||||||
| Comamonas denitrificans | No | |||||||
| Comamonas granuli | No | |||||||
| Comamonas kerstersii | Yes | DSM 16026T HAM | ||||||
| Comamonas koreensis | No | |||||||
| Comamonas nitrativorans | Yes | DSM 13191T HAM | ||||||
| Comamonas odontotermitis | No | |||||||
| Comamonas terrigena | Yes | DSM 7099T HAM | ||||||
| Comamonas testosteroni | Yes | DSM 50244T HAM, B337 UFL | ||||||
| Comamonas thiooxydans | No | |||||||
| Comamonas zonglianii | No | |||||||
| Coprobaccilus cateniformis | Yes | 776012 RLH | ||||||
| Corynebacterium accolens | Yes | DSM 44278T DSM, 87_D5_coll ISB, x_x_28779_H IBS, 8 RLT | ||||||
| Corynebacterium afermentans ssp afermentans | Yes | 78_D4_coll ISB, DSM 44280T DSM, 74_D4_coll ISB, 73_D4_coll ISB, 72_D4_coll ISB | ||||||
| Corynebacterium afermentans ssp lipophilum | Yes | DSM 44282T DSM | ||||||
| Corynebacterium ammoniagenes | Yes | IMET 11243T HKJ, DSM 20306T DSM | ||||||
| Corynebacterium amycolatum | Yes | IBS_MS_3 IBS, IBS_MS_16 IBS, 128_x_A5608_63 IBS, PX_25086111 MLD, DSM 6922T DSM, 100_28_B77962_42 IBS | ||||||
| Corynebacterium appendicis | Yes | DSM 44531T DSM | ||||||
| Corynebacterium aquilae | Yes | DSM 44791T DSM | ||||||
| Corynebacterium argentoratense | Yes | DSM 44202T DSM, 111_19_B2155_53 IBS, 249 RLT | ||||||
| Corynebacterium atypicum | No | |||||||
| Corynebacterium aurimucosum | Yes | DSM 44827 DSM, DSM 44532T DSM, 993900021 LBK, 991800383 LBK, 25 PIM | ||||||
| Corynebacterium auris | Yes | DSM 44122T DSM | ||||||
| Corynebacterium auriscanis | Yes | DSM 44609T DSM | ||||||
| Corynebacterium beticola | No | |||||||
| Corynebacterium bovis | Yes | DSM 20582T DSM, GD10 GDD | ||||||
| Corynebacterium callunae | Yes | DSM 20147T DSM | ||||||
| Corynebacterium camporealensis | Yes | DSM 44610T DSM | ||||||
| Corynebacterium canis | No | |||||||
| Corynebacterium capitovis | Yes | DSM 44611T DSM | ||||||
| Corynebacterium casei | Yes | DSM 44701T DSM | ||||||
| Corynebacterium caspium | No | |||||||
| Corynebacterium ciconiae | Yes | DSM 44920T DSM | ||||||
| Corynebacterium confusum | Yes | DSM 44384T DSM, 287 RLT | ||||||
| Corynebacterium coyleae | Yes | DSM 44184T DSM, 153 RLT | ||||||
| Corynebacterium cystitidis | Yes | DSM 20524T DSM | ||||||
| Corynebacterium deserti | No | |||||||
| Corynebacterium diphtheriae | Diphteria (respiratory and cutaneous) | Aerobic or facultatively anaerobic gram+ rods | Mucosal surfaces, skin samples | 2 | Yes | 1G12072319_3e MVD, DSM 44123T DSM 2 | ||
| Corynebacterium diphtheriae ssp belfanti | 2 | Yes | 44_R9 ISB | |||||
| Corynebacterium diphtheriae ssp gravis | 2 | Yes | 50_R5 ISB | |||||
| Corynebacterium diphtheriae ssp mitis | 2 | Yes | R1_36_29 ISB | |||||
| Corynebacterium doosanense | No | |||||||
| Corynebacterium durum | Yes | C16 MVO, DSM 44351 DSM | ||||||
| Corynebacterium efficiens | Yes | DSM 44549T DSM | ||||||
| Corynebacterium falsenii | Yes | DSM 44353T DSM | ||||||
| Corynebacterium felinum | Yes | DSM 44508T DSM | ||||||
| Corynebacterium flavescens | Yes | IMET 11080T HKJ, DSM 20296T DSM, HKI 11080T HKJ | ||||||
| Corynebacterium freiburgense | No | |||||||
| Corynebacterium freneyi | Yes | DSM 44506T DSM | ||||||
| Corynebacterium glaucum | Yes | DSM 44530T DSM, BK03351_07 ERL | ||||||
| Corynebacterium glucuronolyticum | Yes | 4_B2825 ISB, 1_B12915 ISB, DSM 44120T DSM, DSM 44288 DSM | ||||||
| Corynebacterium glutamicum | Yes | IMET 10482T HKJ, DSM 20300T DSM, GD11 GDD, DSM 20301 DSM 2, DSM 20137 DSM 2 | ||||||
| Corynebacterium halotolerans | Yes | DSM 44683T DSM | ||||||
| Corynebacterium hansenii | Yes | DSM 45109T DSM | ||||||
| Corynebacterium hoagii | No | |||||||
| Corynebacterium humireducens | No | |||||||
| Corynebacterium ilicis | No | |||||||
| Corynebacterium imitans | Yes | DSM 44264T DSM | ||||||
| Corynebacterium jeikeium | Septicemia, endocarditis, wound infections, foreign body infections | Aerobic or facultatively anaerobic gram+ rods | Blood samples, wound swab | 2 | Yes | 27_B30049 ISB, VA_3882_07_13 UKE, DSM 7171T DSM, B73970 ISB, 32_T98977 ISB, 30_CIP 103337T ISB, 118 RLT | ||
| Corynebacterium kroppenstedtii | Yes | VA_3882_07_13 UKE, DSM 7171T DSM, B73970 ISB, 32_T98977 ISB, 30_CIP 103337T ISB | ||||||
| Corynebacterium kutscheri | Yes | DSM 20755T DSM | ||||||
| Corynebacterium lipophile | Yes | grpe F1 115_D5coll_5311_66 IBS | ||||||
| Corynebacterium lipophiloflavum | Yes | DSM 44291T DSM | ||||||
| Corynebacterium lubricantis | No | |||||||
| Corynebacterium macginleyi | Yes | DSM 44284T DSM, 120_D5coll_104099_71 IBS | ||||||
| Corynebacterium marinum | No | |||||||
| Corynebacterium maris | No | |||||||
| Corynebacterium massiliense | No | |||||||
| Corynebacterium mastitidis | Yes | DSM 44356T DSM, DSM 44355 DSM, DSM 44354 DSM | ||||||
| Corynebacterium matruchotii | Yes | DSM 20635T DSM | ||||||
| Corynebacterium minutissimum | Yes | x_x_10288_E IBS, DSM 20651T DSM, 99_25_CCUG 27045_41 IBS, 104_25_CCUG 36888_46 IBS, BK03540_09 ERL, VA14954_09 ERL | ||||||
| Corynebacterium mucifaciens | Yes | DSM 44265T DSM, CS 31_5 BRB, C19 MVO, BK03357_08 ERL, Cory_40 IBS, CS 678_4 BRB | ||||||
| Corynebacterium mustelae | No | |||||||
| Corynebacterium mycetoides | Yes | DSM 20632T DSM | ||||||
| Corynebacterium nuruki | No | |||||||
| Corynebacterium phocae | Yes | DSM 44612T DSM | ||||||
| Corynebacterium pilbarense | No | |||||||
| Corynebacterium pilosum | Yes | DSM 20521T DSM | ||||||
| Corynebacterium propinquum | Yes | 80_D4_coll ISB, 83_D4_coll ISB, 168 RLT, DSM 44285T DSM 2 | ||||||
| Corynebacterium pseudodiphtheriticum | Yes | MB_7369_05 THL, DSM 46628 DSM, ATCC 10701 THL, 10036853_101 USH, DSM 44287T DSM 2 | ||||||
| Corynebacterium pseudotuberculosis | Yes | 64_D6_coll ISB, 62_D6_coll ISB, DSM 20689T DSM, x_x_102968_C IBS, 59_D6_coll ISB, GD7 GDD, GD8 GDD | ||||||
| Corynebacterium pyruviciproducens | No | |||||||
| Corynebacterium renale | Yes | DSM 20688T DSM, GD12 GDD, GD87 GDD | ||||||
| Corynebacterium resistens | Yes | DSM 45100T DSM | ||||||
| Corynebacterium riegelii | Yes | DSM 44326T DSM | ||||||
| Corynebacterium simulans | Yes | DSM 44415T DSM | ||||||
| Corynebacterium singulare | Yes | DSM 44357T DSM | ||||||
| Corynebacterium sp | Yes | DSM 44792T DSM, 901400365 LBK, 901600604 LBK, DSM 6688 DSM, DSM 44792T DSM, 294 RLT, GD14 GDD | ||||||
| Corynebacterium sphenisci | Yes | DSM 44792T DSM | ||||||
| Corynebacterium spheniscorum | Yes | DSM 44757T DSM | ||||||
| Corynebacterium sputi | No | |||||||
| Corynebacterium stationis | Yes | DSM 20302T DSM | ||||||
| Corynebacterium striatum | Yes | PX_21086308 MLD, MB_8820_05 THL, DSM 20668T DSM, 23086514 MLD, 12_B25690 ISB, 10_G1799 ISB, 143 RLT | ||||||
| Corynebacterium suicordis | Yes | DSM 45110T DSM | ||||||
| Corynebacterium sundsvallense | Yes | DSM 44613T DSM, LB151024_11 ERL | ||||||
| Corynebacterium terpenotabidum | Yes | DSM 44721T DSM | ||||||
| Corynebacterium testudinoris | Yes | DSM 44614T DSM | ||||||
| Corynebacterium thomssenii | Yes | DSM 44276T DSM | ||||||
| Corynebacterium tuberculostearicum | Yes | Isolat Bre07 HED, DSM 44922T DSM, CS 678_3 BRB | ||||||
| Corynebacterium tuscaniense | Yes | DSM 45101T DSM | ||||||
| Corynebacterium ulcerans | Yes | 66_D6_coll ISB, 67_D6_coll ISB, 71_D6_coll ISB, DSM 46325T DSM, VA22435_07 ERL | ||||||
| Corynebacterium ulceribovis | No | |||||||
| Corynebacterium urealyticum | Urinary tract infections, septicimia, endocarditis, wound infections | Aerobic or facultatively anaerobic gram+ rods | Blood samples, urine samples, wound swab | 2 | Yes | x_x_43042_J IBS, DSM 7111 DSM, DSM 7110 DSM, DSM 7109T DSM, 25_A25651 ISB, 24_A8761 ISB, 20_CU47 ISB | ||
| Corynebacterium ureicelerivorans | Yes | DSM 45051T DSM | ||||||
| Corynebacterium variabile | Yes | DSM 44702 DSM, DSM 20132T DSM | ||||||
| Corynebacterium vitaeruminis | Yes | DSM 20294T DSM | ||||||
| Corynebacterium xerosis | Yes | DSM 20743T DSM | ||||||
| Cronobacter dublinensis | No | |||||||
| Cronobacter dublinensis ssp. dublinensis | No | |||||||
| Cronobacter dublinensis ssp. lactaridi | No | |||||||
| Cronobacter dublinensis ssp. lausannensis | No | |||||||
| Cronobacter malonaticus | No | |||||||
| Cronobacter muytjensii | No | |||||||
| Cronobacter sakazakii | Yes | DSM 4485T DSM, CCM 3479 CCM, CCM 3461 CCM, CCM 3460 CCM, CCM 1902 CCM | ||||||
| Cronobacter turicensis | No | |||||||
| Cryptococcus albidosimilis | Yeast | Yes | CBS 10184 CBS, CBS 8626 CBS | |||||
| Cryptococcus curvatus | Yeast | Yes | CBS 5163 CBS, CBS 570T CBS | |||||
| Cryptococcus diffluens | Yeast | Yes | CBS 10266 CBS, CBS 160T CBS, CBS 926 CBS | |||||
| Cryptococcus flavescens | Yeast | Yes | CBS 6474 CBS, CBS 8645 CBS | |||||
| Cryptococcus flavus | Yeast (Fungus) | 2 | Yes | DSM 70227T DSM | ||||
| Cryptococcus gastricus | Yeast | Yes | CBS 2288T CBS, CBS 7016 CBS | |||||
| Cryptococcus humicola | Yeast | Yes | CBS 2041 CBS, CBS 571T CBS | |||||
| Cryptococcus laurentii | Yeast (Fungus) | 2 | Yes | VML | ||||
| Cryptococcus liquefaciens | Yeast | Yes | CBS 968T CBS | |||||
| Cryptococcus macerans | Yeast (Fungus) | 2 | Yes | DSM 70822T DSM | ||||
| Cryptococcus magnus | Yeast | Yes | CBS 140T CBS, CBS 4685 CBS, CBS 8361 CBS | |||||
| Cryptococcus neoformans | Yeast (Fungus) | 2 | Yes | ATCC 14116 THL, CCM 8312 CCM, RV07_02 18 VML, 29 PSB | ||||
| Cryptococcus saitoi | Yeast | Yes | CBS 1734 CBS, CBS 1975T CBS, CBS 5106 CBS | |||||
| Cryptococcus terreus | Yeast | Yes | DSM 70222 DSM | |||||
| Cryptococcus uzbekistanensis | Yeast | Yes | CBS 8683T CBS, CBS 5737 CBS | |||||
| Cryptococcus vishniacii | Yeast | Yes | CBS 8142 CBS, CBS 8100 CBS, CBS 7110T CBS | |||||
| Cryptococcus vishniacii var vishniacii | Yeast | Yes | CBS 7158 CBS | |||||
| Cryptococcus_albidus[ana]# Filobasidium_floriforme[teleo]) | Yeast (Fungus) | 2 | Yes | DSM 70197 PAH | ||||
| Cryptococcus_gattii[ana]# (Filobasidiella_bacillispora[teleo]) | Yeast (Fungus) | 2 | Yes | RV490_Oct09_01 LBK, RV490_Sep09_1 SLT | ||||
| Cryptococcus_uniguttulatus[ana] (Filobasidium_uniguttulatum[teleo]#) | Yeast (Fungus) | 2 | Yes | DSM 4652 DSM, DSM 70225 DSM, H051_08 ERL | ||||
| Cupriavidus basilensis | Aerobic or facultatively anaerobic gram- rods | No | ||||||
| Cupriavidus campinensis | Aerobic or facultatively anaerobic gram- rods | Yes | DSM 17293T DSM | |||||
| Cupriavidus gilardii | Infections, sepsis | Aerobic or facultatively anaerobic gram- rods | cerebrospinal fluid, blood | 2 | Yes | DSM 17292T DSM, UR5273_09 ERL | ||
| Cupriavidus laharis | Aerobic or facultatively anaerobic gram- rods | No | ||||||
| Cupriavidus metallidurans | Aerobic or facultatively anaerobic gram- rods | Yes | DSM 2839T DSM | |||||
| Cupriavidus necator | Nonpathogenic | Aerobic or facultatively anaerobic gram- rods | Soil samples | 1 | Yes | DSM 428 DSM, DSM 531 HAM, B238 UFL, B619 UFL, B479 UFL, B480 UFL, B394 UFL | ||
| Cupriavidus oxalaticus | Aerobic or facultatively anaerobic gram- rods | Yes | DSM 428 DSM, DSM 531 HAM, B238 UFL, B619 UFL | |||||
| Cupriavidus pampae | Aerobic or facultatively anaerobic gram- rods | No | ||||||
| Cupriavidus pauculus | Aerobic or facultatively anaerobic gram- rods | Yes | VA_31954_09 ERL, UR01767_08 ERL, RV_00001_09 ERL, RV 412_0209_1 LBK, DSM 17313T DSM | |||||
| Cupriavidus pinatubonensis | Aerobic or facultatively anaerobic gram- rods | No | ||||||
| Cupriavidus respiraculi | Aerobic or facultatively anaerobic gram- rods | Yes | DSM 17358T DSM, BK1724 EVM | |||||
| Cupriavidus sp. [1] | Yes | VA15406_09 ERL | ||||||
| Cupriavidus taiwanensis | Aerobic or facultatively anaerobic gram- rods | No | ||||||
| Curtobacterium albidum | Yes | HKI 11500 HKJ | Synonym Brevibacterium albidum | |||||
| Curtobacterium ammoniigenes | No | |||||||
| Curtobacterium citreum | No | |||||||
| Curtobacterium flaccumfaciens pvar poinsettiae | Yes | DSM 20149 DSM | ||||||
| Curtobacterium ginsengisoli | No | |||||||
| Curtobacterium herbarum | No | |||||||
| Curtobacterium luteum | Yes | P_3183_1 IMK, HKI 10360 HKJ | ||||||
| Curtobacterium plantarum | No | |||||||
| Curtobacterium pusillum | No | |||||||
| Curtobacterium sp | Yes | 68 PIM | ||||||
| Cyberlindnera mississippiensis | Yeast | Yes | CBS 7027 CBS, CBS 7026 CBS, CBS 7025 CBS, CBS 7024 CBS, CBS 7023 CBS | |||||
| Debaryomyces etchellsii | Fungus | Yes | CBS 2011T VML, CBS 5603 VML | |||||
| Debaryomyces hansenii | Fungus | Yes | 991300257 LBK, DSM 70590 DSM, MY105_10 ERL | |||||
| Deinococcus aerius | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus aerolatus | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus aerophilus | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus aetherius | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus alpinitundrae | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus altitudinis | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus apachensis | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus aquaticus | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus aquatilis | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus aquiradiocola | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus caeni | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus cellulosilyticus | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus claudionis | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus daejeonensis | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus depolymerans | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus deserti | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus ficus | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus frigens | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus geothermalis | Gram+ resistant to gamma and UV radiation | Yes | DSM 11302 DSM, DSM 11301 DSM, DSM 11300T DSM | |||||
| Deinococcus gobiensis | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus grandis | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus hohokamensis | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus hopiensis | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus humi | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus indicus | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus maricopensis | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus marmoris | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus misasensis | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus murrayi | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus navajonensis | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus papagonensis | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus peraridilitoris | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus pimensis | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus piscis | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus proteolyticus | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus radiodurans | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus radiomollis | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus radiophilus | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus radiopugnans | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus reticulitermitis | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus roseus | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus saxicola | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus sonorensis | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus wulumuqiensis | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus xibeiensis | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus xinjiangensis | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus yavapaiensis | Gram+ resistant to gamma and UV radiation | No | ||||||
| Deinococcus yunweiensis | Gram+ resistant to gamma and UV radiation | No | ||||||
| Delftia acidovorans | Gram-, non-spore-forming aerobe rods | Yes | 034_W13 NFI, CCM 2410 CCM, CCM 283 CCM, DSM 39T HAM | |||||
| Delftia lacustris | Gram-, non-spore-forming aerobe rods | No | ||||||
| Delftia sp | Gram-, non-spore-forming aerobe rods | Yes | 911600013 LBK | |||||
| Delftia tsuruhatensis | Gram-, non-spore-forming aerobe rods | No | ||||||
| Dermabacter hominis | Yes | 122_x_T29453_64 IBS, 126_x_B25504_60 IBS, DSM 7083T DSM, 452 RLT | ||||||
| Dermacoccus abyssi | No | |||||||
| Dermacoccus barathri | No | |||||||
| Dermacoccus nishinomiyaensis | Yes | DSM 20448T DSM | ||||||
| Dermacoccus profundi | No | |||||||
| Dermatophilus congolensis | Yes | DSM 43037 DSM, DSM 44172 DSM, DSM 44174 DSM, DSM 44173 DSM, DSM 44180T DSM | ||||||
| Devosia albogilva | No | |||||||
| Devosia chinhatensis | No | |||||||
| Devosia crocina | No | |||||||
| Devosia geojensis | No | |||||||
| Devosia glacialis | No | |||||||
| Devosia insulae | No | |||||||
| Devosia limi | No | |||||||
| Devosia neptuniae | No | |||||||
| Devosia psychrophila | No | |||||||
| Devosia riboflavina | Yes | CIP 59_10T CIP, DSM 7230T DSM | ||||||
| Devosia soli | No | |||||||
| Devosia subaequoris | No | |||||||
| Devosia yakushimensis | No | |||||||
| Dialister invisus | No | |||||||
| Dialister micraerophilus | Yes | 08_001 N3 IBS | ||||||
| Dialister pneumosintes | Yes | VA12065_2_11 ERL | ||||||
| Dialister propionicifaciens | No | |||||||
| Dialister succinatiphilus | No | |||||||
| Dichelobacter nodosus | Yes | DSM 20708 DSM | ||||||
| Dickeya chrysanthemi | Yes | DSM 4610T HAM | ||||||
| Dickeya dadantii | Yes | DSM 18020T HAM | ||||||
| Dickeya dadantii ssp dieffenbachiae | Yes | DSM 18013T HAM | ||||||
| Dickeya dianthicola | Yes | DSM 18054T HAM | ||||||
| Dickeya paradisiaca | Yes | DSM 18069T HAM | ||||||
| Dickeya zeae | Yes | DSM 18068T HAM | ||||||
| Dietzia aerolata | No | |||||||
| Dietzia alimentaria | No | |||||||
| Dietzia aurantiaca | No | |||||||
| Dietzia cercidiphylli | No | |||||||
| Dietzia cinnamea | Yes | 117 RLT | ||||||
| Dietzia kunjamensis | No | |||||||
| Dietzia lutea | No | |||||||
| Dietzia maris | Yes | B491 UFL, DSM 43672T DSM | ||||||
| Dietzia natronolimnaea | Yes | 091216_01 LSM, 091216_02 LSM, DSM 44198 DSM | ||||||
| Dietzia papillomatosis | No | |||||||
| Dietzia psychralcaliphila | No | |||||||
| Dietzia schimae | No | |||||||
| Dietzia timorensis | No | |||||||
| Dysgonomonas capnocytophagoides | No | |||||||
| Dysgonomonas gadei | Yes | F_8814_1 IMK | ||||||
| Dysgonomonas hofstadii | No | |||||||
| Dysgonomonas mossii | No | |||||||
| Edwardsiella hoshinae | Yes | DSM 13771T HAM | ||||||
| Edwardsiella ictaluri | Yes | CECT 885T EGS, DSM 13697T HAM | ||||||
| Edwardsiella tarda | Yes | ATCC 35_1 EGS, ATCC 36_1 EGS, CECT 849T EGS, DSM 30052T HAM, HL23_1 EGS, NCIMB EGS | ||||||
| Eggerthella lenta | Yes | 0807M25073601 IBS, 9 RLT, 17 RLT, DSM 15644 DSM, DSM 2243T DSM, LA10142401 LZR | ||||||
| Eggerthella sinensis | No | |||||||
| Eggerthia catenaformis | Yes | 07_085 ANA IBS, CIP 104817T B CIP, IBS_MS_39 IBS, VA12065_1_11 ERL | Synonym Eggerthia catenaformis | |||||
| Eikenella corrodens | Yes | 26002_1b LSM, DSM 8340T DSM | ||||||
| Elizabethkingia anophelis | No | |||||||
| Elizabethkingia meningoseptica | Yes | DSM 2800T HAM, CCM 2719T CCM, 002_NEB14 NFI | ||||||
| Elizabethkingia miricola | Yes | DSM 14571T HAM | ||||||
| Emericella nidulans (teleo) Asperillus nidulans (ana) | Fungus | Yes | VML | |||||
| Empedobacter brevis | Yes | LMG 4011T HAM, VA_00481_09 ERL | ||||||
| Engyodontium parvisporum | Fungus | Environment | 1 | No | IHEM 22910 HKU | |||
| Engyodontium rectidentatum | Fungus | Environment | 1 | No | CBS 206.74 HKU, CBS 547.82 HKU, CBS 641.74 HKU | |||
| Enterobacter aerogenes | Yes | 15282_1 CHB, ATCC 13048T THL, DSM 30053T HAM | ||||||
| Enterobacter amnigenus | Yes | DSM 30055 DSM, DSM 4486T DSM | ||||||
| Enterobacter arachidis | No | |||||||
| Enterobacter asburiae | Yes | CCM 4032 CCM, CCM 4032 CCM, DSM 17506T DSM, RV412_A1_2010_05 LBK | ||||||
| Enterobacter cancerogenus | Yes | DSM 17580T DSM | ||||||
| Enterobacter cloacae | Yes | 13159_1 CHB, 20105_2 CHB, DSM 30060 DSM, DSM 30062 DSM, DSM 3264 DSM, DSM 46348 DSM, DSM 6234 DSM, MB11506_1 CHB, MB_8779_05 THL, MB_5277_05 THL | ||||||
| Enterobacter cloacae ssp cloacae | Yes | DSM 30054T HAM | ||||||
| Enterobacter cloacae ssp dissolvens | Yes | DSM 16657T HAM | ||||||
| Enterobacter cowanii | Yes | DSM 18146T DSM | renamed as Kosakonia cowanii | |||||
| Enterobacter gergoviae | Yes | CCM 3459 CCM, CCM 3475 CCM, DSM 9245T HAM | ||||||
| Enterobacter helveticus | No | |||||||
| Enterobacter hormaechei ssp hormaechei | Yes | DSM 12409T DSM | ||||||
| Enterobacter kobei | Yes | DSM 13645T DSM | ||||||
| Enterobacter ludwigii | Yes | DSM 16688T DSM | ||||||
| Enterobacter mori | No | |||||||
| Enterobacter nimipressuralis | No | |||||||
| Enterobacter oryzae | No | |||||||
| Enterobacter pulveris | No | |||||||
| Enterobacter pyrinus | Yes | DSM 12410T DSM, DSM 12410T HAM | ||||||
| Enterobacter radicincitans | Yes | DSM 16656T DSM | renamed as Kosakonia radicincitans | |||||
| Enterobacter soli | No | |||||||
| Enterobacter turicensis | No | |||||||
| Enterococcus aquimarinus | Yes | DSM 17690T JUG | ||||||
| Enterococcus asini | Yes | DSM 11492T JUG | ||||||
| Enterococcus avium | Yes | 96 PIM, 125 RLT, DSM 20063 DSM, DSM 20679T JUG | ||||||
| Enterococcus caccae | Yes | DSM 19114T JUG | ||||||
| Enterococcus camelliae | No | |||||||
| Enterococcus canintestini | Yes | DSM 21207T JUG, P_3828_1 IMK | ||||||
| Enterococcus canis | Yes | DSM 17029T JUG | ||||||
| Enterococcus casseliflavus | Yes | DSM 20382 DSM, DSM 20680T DSM, DSM 4841 DSM, DSM 7370 DSM, DSM 7371 DSM, DSM 7372 DSM | ||||||
| Enterococcus cecorum | Yes | DSM 20682T JUG, DSM 20683 DSM, GD1 GDD, GD2 GDD | ||||||
| Enterococcus columbae | Yes | DSM 7374T DSM | ||||||
| Enterococcus devriesei | Yes | DSM 22802T JUG | ||||||
| Enterococcus dispar | Yes | DSM 6630T JUG | ||||||
| Enterococcus durans | Yes | DSM 20633T DSM | ||||||
| Enterococcus faecalis | Bacteremia, intraabdominal abscess, urinary tract infection, endocarditis | Aerobic or facultatively anaerobic Gram+ cocci | Blood samples, urine samples, feces samples | 2 | Yes | 20247_4 CHB, ATCC 29212 CHB, ATCC 7080 THL, DSM 20371 DSM, DSM 20409 DSM, DSM 20478T JUG, DSM 2570 DSM, DSM 6134 DSM | ||
| Enterococcus faecium | Bacteremia, intraabdominal abscess, urinary tract infection, endocarditis | Aerobic or facultatively anaerobic Gram+ cocci | Blood samples, urine samples, feces samples | 2 | Yes | 11037 CHB, 20218_1 CHB, DSM 13589 DSM, DSM 17050 DSM, DSM 2146 DSM, DSM 2918 DSM, DSM 6177 DSM, PX_21086109_III MLD, VRE_PX_16086218 MLD | ||
| Enterococcus gallinarum | Yes | DSM 20717 DSM, DSM 20628T JUG, DSM 20718 DSM | ||||||
| Enterococcus gilvus | Yes | DSM 15689T JUG | ||||||
| Enterococcus haemoperoxidus | Yes | DSM 15920T JUG | ||||||
| Enterococcus hermanniensis | Yes | DSM 17122T JUG | ||||||
| Enterococcus hirae | Yes | DSM 20160T DSM, 139 RLT, DSM 3320 DSM, IBS_MS_18 IBS | ||||||
| Enterococcus italicus | Yes | DSM 15952T JUG | ||||||
| Enterococcus malodoratus | Yes | DSM 20681T DSM, VA_20209_09 ERL | ||||||
| Enterococcus moraviensis | Yes | DSM 15919T JUG | ||||||
| Enterococcus mundtii | Yes | DSM 4838T DSM, DSM 4839 DSM, DSM 4840 DSM | ||||||
| Enterococcus pallens | Yes | DSM 15690T JUG | ||||||
| Enterococcus phoeniculicola | Yes | DSM 14726T JUG | ||||||
| Enterococcus pseudoavium | Yes | DSM 5632T DSM | ||||||
| Enterococcus raffinosus | Yes | DSM 5633T DSM, BK1847 EVM | ||||||
| Enterococcus ratti | Yes | DSM 15687T JUG | ||||||
| Enterococcus saccharolyticus | Yes | DSM 20726T JUG | ||||||
| Enterococcus silesiacus | Yes | DSM 22801T JUG | ||||||
| Enterococcus sulfureus | Yes | DSM 6905T JUG | ||||||
| Enterococcus termitis | Yes | DSM 22803T JUG | ||||||
| Enterococcus thailandicus | Yes | DSM 21767T JUG | ||||||
| Enterococcus viikkiensis | No | |||||||
| Enterococcus villorum | Yes | DSM 15688T JUG | ||||||
| Epidermophyton floccosum | tinea pedis, tinea cruris, tinea corporis, and onychomycosis | Fungus | Skin | 2 | Yes | 27 VML | ||
| Erwinia amylovora | Yes | 1_79 MMG, 273 MMG, CFBP 1232T MMG, CFBP 1232T PAH, MR1 MMG | ||||||
| Erwinia billingiae | Yes | 660 MMG, DSM 17872T HAM, 661 MMG, EB 661 PAH | ||||||
| Erwinia mallotivora | Yes | CFBP 2503T MMG, DSM 4565T HAM | ||||||
| Erwinia oleae | No | |||||||
| Erwinia papayae | Yes | DSM 16540T HAM | ||||||
| Erwinia persicina | No | |||||||
| Erwinia persicina | Yes | CFBP 3622T PAH, LMG 11254T HAM, MMG | ||||||
| Erwinia piriflorinigrans | No | |||||||
| Erwinia psidii | Yes | CFBP 3627T MMG, DSM 17597T HAM | ||||||
| Erwinia pyrifoliae | Yes | 16_96 MMG, 1_96 MMG, DSM 12163T HAM, Ejp557 MMG, Ep 16_96 PAH, Ep 1_96 PAH | ||||||
| Erwinia rhapontici | Yes | CFBP 3618T PAH, DSM 4484T HAM, MMG | ||||||
| Erwinia sp. | Yes | 10w414559 RLH | ||||||
| Erwinia tasmaniensis | Yes | 1_99 MMG, 2_99 MMG, 4_99 MMG, Et 1_99 PAH, Et 2_99 PAH | ||||||
| Erwinia toletana | No | |||||||
| Erwinia tracheiphila | Yes | DSM 21139T DSM | ||||||
| Erwinia typographi | No | |||||||
| Erysipelothrix inopinata | Yes | DSM 15511T DSM | ||||||
| Erysipelothrix rhusiopathiae | Erysipeloid (cellulitis with painful, pruritic skin lesions) | Aerobic or facultatively anaerobic gram+ rods | 2 | Yes | B9788 IBS, DSM 5055T DSM, DSM 5056 DSM, DSM 5057 DSM, DSM 5058 DSM, EDQM Serotyp1 FLR, EDQM Serotyp2 FLR, ERY604 IBS, ERYB19478 IBS, FF XI SerotypN FLR | |||
| Erysipelothrix tonsillarum | Yes | DSM 14972T DSM | ||||||
| Escherichia albertii | Yes | DSM 17582T HAM | ||||||
| Escherichia coli | Yes | ATCC 25922 CHB, ATCC 35218 CHB, ATCC 25922 THL, B421 UFL, DH5alpha BRL, DSM 30083T HAM, ESBL_EA_RSS_1528T CHB, MB11464_1 CHB, Nissl VML, RV412_A1_2010_06a LBK, W3350 MMG | ||||||
| Escherichia fergusonii | Yes | DSM 13698 HAM | ||||||
| Escherichia hermannii | Yes | 12048047 MVD, CS 573_1a BRB, DSM 4560T DSM | ||||||
| Escherichia vulneris | Yes | DSM 4564T DSM | ||||||
| Eubacterium acidaminophilum | No | |||||||
| Eubacterium aggregans | No | |||||||
| Eubacterium angustum | No | |||||||
| Eubacterium barkeri | No | |||||||
| Eubacterium biforme | No | |||||||
| Eubacterium brachy | Yes | DSM 3990T DSM | ||||||
| Eubacterium budayi | No | |||||||
| Eubacterium callanderi | Yes | IBS_MS_40 IBS | ||||||
| Eubacterium cellulosolvens | No | |||||||
| Eubacterium combesii | No | |||||||
| Eubacterium contortum | No | |||||||
| Eubacterium coprostanoligenes | No | |||||||
| Eubacterium cylindroides | No | |||||||
| Eubacterium desmolans | No | |||||||
| Eubacterium dolichum | No | |||||||
| Eubacterium eligens | No | |||||||
| Eubacterium fissicatena | No | |||||||
| Eubacterium hadrum | No | |||||||
| Eubacterium hallii | No | |||||||
| Eubacterium infirmum | No | |||||||
| Eubacterium lentum | No | |||||||
| Eubacterium limosum | Yes | 11 RLT, DSM 20517 DSM, DSM 20543T DSM, DSM 2593 DSM, DSM 2594 DSM | ||||||
| Eubacterium minutum | No | |||||||
| Eubacterium moniliforme | No | |||||||
| Eubacterium multiforme | No | |||||||
| Eubacterium nitritogenes | No | |||||||
| Eubacterium nodatum | No | |||||||
| Eubacterium oxidoreducens | No | |||||||
| Eubacterium plexicaudatum | No | |||||||
| Eubacterium pyruvativorans | No | |||||||
| Eubacterium ramulus | No | |||||||
| Eubacterium rectale | No | |||||||
| Eubacterium ruminantium | No | |||||||
| Eubacterium saburreum | No | |||||||
| Eubacterium saphenum | No | |||||||
| Eubacterium siraeum | No | |||||||
| Eubacterium sp[2] | Yes | 09_28_02 Bplus IBS | ||||||
| Eubacterium sulci | No | |||||||
| Eubacterium tarantellae | No | |||||||
| Eubacterium tenue | No | |||||||
| Eubacterium tortuosum | No | |||||||
| Eubacterium uniforme | No | |||||||
| Eubacterium ventriosum | No | |||||||
| Eubacterium xylanophilum | No | |||||||
| Eubacterium yurii | Yes | 10 RLT | ||||||
| Eubacterium yurii ssp. margaretiae | No | |||||||
| Eubacterium yurii ssp. schtitka | No | |||||||
| Eubacterium yurii ssp. yurii | No | |||||||
| Ewingella americana | Oppurtunistic pathogen infects immunocompromized patients | Gram-, rod, aerobe | wounds, sputum, urine, feces, blood, conjunctiva and peritoneal dialysate | Yes | 19_QK 122 MHH, DSM 4580T HAM, RV412_A1_2010_01 LBK | |||
| Exiguobacterium aurantiacum | Yes | 290 RLT | ||||||
| Exiguobacterium sp | Yes | %5B4%5D 10_0147905_007_01 LGL, %5B4%5D 10_0147905_008_01 LGL, %5B4%5D 911600255 LBK | ||||||
| Exophiala dermatitidis | Yeast-like fungus | Yes | NRZ_133 LFH, RVE_08I VML, VML | |||||
| Facklamia hominis | Yes | CIP 105962T_2 CIP, CIP 105963_2 CIP, UR03446_08 ERL | ||||||
| Facklamia ignava | No | |||||||
| Facklamia languida | Yes | 19 RLT | ||||||
| Facklamia miroungae | No | |||||||
| Facklamia sourekii | No | |||||||
| Facklamia tabacinasalis | No | |||||||
| Filifactor alocis | No | |||||||
| Filifactor villosum | Yes | 1051_NCTC 11220T BOG | ||||||
| Filobasidium capsuligenum | Fungus | Yes | DSM 70253 DSM | |||||
| Finegoldia magna | Yes | 07_937 N5 IBS, 06_469 IBS, DSM 20362 DSM, DSM 20369 DSM, DSM 20470T DSM, DSM 20472 DSM, HU27914 PNU, HU29642_2 PNU, HU29644_1 PNU, 110706_D1 LUMC, HU30296_1 PNU | ||||||
| Flavobacterium acidificum | No | |||||||
| Flavobacterium acidurans | No | |||||||
| Flavobacterium algicola | No | |||||||
| Flavobacterium anhuiense | No | |||||||
| Flavobacterium antarcticum | No | |||||||
| Flavobacterium aquatile | No | |||||||
| Flavobacterium aquidurense | No | |||||||
| Flavobacterium banpakuense | No | |||||||
| Flavobacterium beibuense | No | |||||||
| Flavobacterium branchiophilum | No | |||||||
| Flavobacterium caeni | No | |||||||
| Flavobacterium cauense | No | |||||||
| Flavobacterium ceti | No | |||||||
| Flavobacterium cheniae | No | |||||||
| Flavobacterium cheonanense | No | |||||||
| Flavobacterium chungangense | No | |||||||
| Flavobacterium chungbukense | No | |||||||
| Flavobacterium chungnamense | No | |||||||
| Flavobacterium columnare | No | Flavobacterium columnare F512 | ||||||
| Flavobacterium croceum | No | |||||||
| Flavobacterium cucumis | No | |||||||
| Flavobacterium daejeonense | No | |||||||
| Flavobacterium defluvii | No | |||||||
| Flavobacterium degerlachei | No | |||||||
| Flavobacterium denitrificans | No | |||||||
| Flavobacterium devorans | No | |||||||
| Flavobacterium dongtanense | No | |||||||
| Flavobacterium filum | No | |||||||
| Flavobacterium flevense | Yes | DSM 1076T HAM | ||||||
| Flavobacterium fluvii | No | |||||||
| Flavobacterium frigidarium | No | |||||||
| Flavobacterium frigidimaris | No | |||||||
| Flavobacterium frigoris | No | |||||||
| Flavobacterium fryxellicola | No | |||||||
| Flavobacterium gelidilacus | Yes | DSM 15343T HAM | ||||||
| Flavobacterium gillisiae | No | |||||||
| Flavobacterium ginsenosidimutans | No | |||||||
| Flavobacterium glaciei | No | |||||||
| Flavobacterium glycines | No | |||||||
| Flavobacterium granuli | No | |||||||
| Flavobacterium haoranii | No | |||||||
| Flavobacterium hercynium | No | |||||||
| Flavobacterium hibernum | Yes | DSM 12611T HAM | ||||||
| Flavobacterium hydatis | Yes | DSM 2063T HAM | ||||||
| Flavobacterium indicum | No | |||||||
| Flavobacterium johnsoniae | Yes | DSM 2064T HAM | ||||||
| Flavobacterium koreense | No | |||||||
| Flavobacterium limicola | No | |||||||
| Flavobacterium lindanitolerans | Yes | 991400534 LBK | ||||||
| Flavobacterium macrobrachii | No | |||||||
| Flavobacterium micromati | No | |||||||
| Flavobacterium mizutaii | No | |||||||
| Flavobacterium myungsuense | No | |||||||
| Flavobacterium oceanosedimentum | No | |||||||
| Flavobacterium omnivorum | No | |||||||
| Flavobacterium oncorhynchi | No | |||||||
| Flavobacterium pectinovorum | Yes | DSM 6368T HAM | ||||||
| Flavobacterium phragmitis | No | |||||||
| Flavobacterium ponti | No | |||||||
| Flavobacterium psychrolimnae | No | |||||||
| Flavobacterium psychrophilum | 2 | No | F510 | |||||
| Flavobacterium reichenbachii | No | |||||||
| Flavobacterium resistens | No | |||||||
| Flavobacterium rivuli | No | |||||||
| Flavobacterium saccharophilum | Yes | DSM 1811T HAM | ||||||
| Flavobacterium saliperosum | Yes | DSM 6368T HAM | ||||||
| Flavobacterium sasangense | No | |||||||
| Flavobacterium segetis | No | |||||||
| Flavobacterium sinopsychrotolerans | No | |||||||
| Flavobacterium soli | No | |||||||
| Flavobacterium subsaxonicum | No | |||||||
| Flavobacterium succinicans | No | |||||||
| Flavobacterium suncheonense | No | |||||||
| Flavobacterium swingsii | No | |||||||
| Flavobacterium tegetincola | No | |||||||
| Flavobacterium terrae | No | |||||||
| Flavobacterium terrigena | No | |||||||
| Flavobacterium thermophilum | No | |||||||
| Flavobacterium tiangeerense | No | |||||||
| Flavobacterium urumqiense | No | |||||||
| Flavobacterium weaverense | No | |||||||
| Flavobacterium xanthum | No | |||||||
| Flavobacterium xinjiangense | No | |||||||
| Flavobacterium xueshanense | No | |||||||
| Flavobacterium yonginense | No | |||||||
| Flavonifractor plautii | Yes | DSM 6740T DSM, 110706_H5 LUMC | ||||||
| Francisella halioticida | Gram-, coccobaccilli or rod-shaped, non-motile, strict aerobe. | No | ||||||
| Francisella hispaniensis | Gram-, coccobaccilli or rod-shaped, non-motile, strict aerobe. | No | ||||||
| Francisella noatunensis | Gram-, coccobaccilli or rod-shaped, non-motile, strict aerobe. | No | ||||||
| Francisella noatunensis ssp noatunensis | Gram-, coccobaccilli or rod-shaped, non-motile, strict aerobe. | No | ||||||
| Francisella noatunensis ssp orientalis | Gram-, coccobaccilli or rod-shaped, non-motile, strict aerobe. | No | ||||||
| Francisella philomiragia | Gram-, coccobaccilli or rod-shaped, non-motile, strict aerobe. | 2 | Yes | F184 IMBM, F185 IMBM, ATCC 25015 F51 IMBM, ATCC 25016 F50 IMBM, ATCC 25017 F93 IMBM, ATCC 25018 F94 IMBM | ||||
| Fusarium poae | Grass pathogen | Fungus | Yes | DSM 62376 HED | ||||
| Fusarium proliferatum | Fungus | Yes | 80 VML | |||||
| Fusobacterium canifelinum | Yes | DSM 15542T DSM, DSM 15543 DSM, DSM 15542T BRB, DSM 15543 BRB | ||||||
| Fusobacterium equinum | Yes | DSM 17476T DSM | ||||||
| Fusobacterium gonidiaformans | No | DSM 19810T DSM, 110706_B5 LUMC, 110706_G3 LUMC | ||||||
| Fusobacterium mortiferum | Yes | DSM 19809T DSM, DSM 19809T BRB | ||||||
| Fusobacterium naviforme | Yes | DSM 20699 DSM, DSM 20699 BRB | ||||||
| Fusobacterium necrogenes | No | |||||||
| Fusobacterium necrophorum | Yes | 100617_05 PNU | ||||||
| Fusobacterium necrophorum ssp funduliforme | Yes | DSM 19678T DSM | ||||||
| Fusobacterium necrophorum ssp necrophorum | Yes | CCM 5982 CCM, DSM 20698 DSM, 110324_20 PNU, DSM 20698 BRB, DSM 21784T DSM | ||||||
| Fusobacterium nucleatum | Yes | 100617_02 PNU, 110706_B6 LUMC, 110706_B7 LUMC, 110706_B8 LUMC, BK635_11 ERL | ||||||
| Fusobacterium nucleatum ssp animalis | Yes | DSM 19679T DSM | ||||||
| Fusobacterium nucleatum ssp fusiforme | Yes | DSM 19508T DSM, DSM 19508T BRB | ||||||
| Fusobacterium nucleatum ssp nucleatum | Yes | DSM 15643T DSM, DSM 15643T BRB | ||||||
| Fusobacterium nucleatum ssp polymorphum | Yes | DSM 20482T DSM | ||||||
| Fusobacterium nucleatum ssp vincentii | Yes | DSM 19507T DSM, DSM 19507T BRB | ||||||
| Fusobacterium perfoetens | No | |||||||
| Fusobacterium periodonticum | Yes | DSM 19545T DSM | ||||||
| Fusobacterium russii | No | |||||||
| Fusobacterium simiae | No | |||||||
| Fusobacterium sp[2] | Yes | 08_001 N5 IBS, 110324_90 PNU | ||||||
| Fusobacterium ulcerans | Yes | DSM 19847T DSM | ||||||
| Fusobacterium varium | Yes | DSM 19868T DSM, DSM 19868T BRB | ||||||
| Gallibacterium anatis | Yes | DSM 16844T DSM, GD45 GDD | ||||||
| Gallibacterium melopsittaci | No | |||||||
| Gallibacterium salpingitidis | No | |||||||
| Gallibacterium trehalosifermentans | No | |||||||
| Gardnerella sp | Yes | 110324_90 PNU | ||||||
| Gardnerella vaginalis | Yes | 1 PGM, 2 PGM, 5 PGM, Artush PGM, DSM 4944T DSM | ||||||
| Gemella asaccharolytica | No | |||||||
| Gemella bergeri | Yes | CIP 105584T_2 CIP | ||||||
| Gemella cuniculi | No | |||||||
| Gemella haemolysans | Yes | G226 IBS, 100617_53 PNU | ||||||
| Gemella morbillorum | Yes | DSM 20572T DSM, P3bue_re4AN USH, P3flue_li11AN USH, P3flue_re3AN USH | ||||||
| Gemella palaticanis | No | |||||||
| Gemella sanguinis | Yes | CIP 105929T_3 CIP, CIP 105931_3 CIP, 100617_50 PNU, 110706_C5 LUMC | ||||||
| Geobacillus caldoxylosilyticus | Gram+ | No | ||||||
| Geobacillus debilis | Gram+ | No | ||||||
| Geobacillus galactosidasius | Gram+ | No | ||||||
| Geobacillus jurassicus | Gram+ | No | ||||||
| Geobacillus kaustophilus | Gram+ | Yes | DSM 7263T DSM | |||||
| Geobacillus lituanicus | Gram+ | No | ||||||
| Geobacillus stearothermophilus | Gram+ | Yes | DSM 22T DSM, DSM 2027 DSM, DSM 457 DSM, DSM 5934 DSM | |||||
| Geobacillus subterraneus | Gram+ | No | ||||||
| Geobacillus tepidamans | Gram+ | No | ||||||
| Geobacillus thermocatenulatus | Gram+ | No | ||||||
| Geobacillus thermodenitrificans | Gram+ | No | ||||||
| Geobacillus thermodenitrificans ssp. calidus | Gram+ | Yes | DSM 22629T DSM, DSM 22628 DSM | |||||
| Geobacillus thermodenitrificans ssp. thermodenitrificans | Gram+ | No | ||||||
| Geobacillus thermoglucosidasius | Gram+ | Yes | DSM 2543 DSM, DSM 2542T DSM, DSM 21625 DSM | |||||
| Geobacillus thermoleovorans | Gram+ | No | ||||||
| Geobacillus toebii | Gram+ | No | ||||||
| Geobacillus uzenensis | Gram+ | No | ||||||
| Geobacillus vulcani | Gram+ | No | ||||||
| Geotrichum silvicola | Fungus | Yes | 04_007 LBK, 04_188 LBK, 04_322 LBK, 1 LBK, 2 LBK | |||||
| Geotrichum sp | Fungus | Yes | 116 PSB | |||||
| Geotrichum_candidum[ana]# (Galactomyces_geotrichum[teleo]) | Fungus | Yes | DSM 1240 DSM, RV_02 VML | |||||
| Geotrichum_ingens[ana] (Dipodascus_ingens[teleo]#) | Fungus | Yes | DSM 70069 DSM, DSM 70068 DSM | |||||
| Globicatella sulfidifaciens | Yes | 11_0100356_001_01 LGL | ||||||
| Gluconacetobacter azotocaptans | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Gluconacetobacter diazotrophicus | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and roots | 1 | No | ||||
| Gluconacetobacter entanii | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and roots | 1 | No | ||||
| Gluconacetobacter europaeus | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Gluconacetobacter hansenii | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Gluconacetobacter intermedius | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | Yes | DSM 11804T DSM | |||
| Gluconacetobacter johannae | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Gluconacetobacter liquefaciens | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | Yes | DSM 5603T DSM | |||
| Gluconacetobacter nataicola | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Gluconacetobacter oboediensis | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Gluconacetobacter rhaeticus | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Gluconacetobacter sacchari | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Gluconacetobacter saccharivorans | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Gluconacetobacter sucrofermentans | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Gluconacetobacter swingsii | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Gluconacetobacter xylinus | Aerobic, Gram-, acetic acid bacteria, convert ethanol to acetic acid | Plants and environmental samples | 1 | No | ||||
| Gluconobacter albidus | Gram- | No | ||||||
| Gluconobacter cerinus | Gram- | Yes | DSM 9533R DSM, DSM 7148 DSM | |||||
| Gluconobacter frateurii | Gram- | No | ||||||
| Gluconobacter japonicus | Gram- | No | ||||||
| Gluconobacter kanchanaburiensis | Gram- | No | ||||||
| Gluconobacter kondonii | Gram- | No | ||||||
| Gluconobacter nephelii | Gram- | No | ||||||
| Gluconobacter oxydans ssp oxydans | Gram- | Yes | B540_UFL, B544_UFL | |||||
| Gluconobacter roseus | Gram- | No | ||||||
| Gluconobacter sphaericus | Gram- | No | ||||||
| Gluconobacter thailandicus | Gram- | No | ||||||
| Gluconobacter uchimurae | Gram- | No | ||||||
| Gluconobacter wancherniae | Gram- | No | ||||||
| Gordonia aichiensis | Yes | DSM 43978T DSM | ||||||
| Gordonia alkanivorans | Yes | DSM 44187 DSM | ||||||
| Gordonia amarae | No | |||||||
| Gordonia amicalis | No | |||||||
| Gordonia araii | No | |||||||
| Gordonia australis | Yes | DSM 44454T DSM | ||||||
| Gordonia bronchialis | Yes | DSM 43247T DSM | ||||||
| Gordonia cholesterolivorans | No | |||||||
| Gordonia defluvii | No | |||||||
| Gordonia desulfuricans | No | |||||||
| Gordonia effusa | No | |||||||
| Gordonia hankookensis | No | |||||||
| Gordonia hirsuta | No | |||||||
| Gordonia hongkongensis | Bacteraemia, Continuous ambulatory peritoneal dialysis (CAPD)-related peritonitis | Bacteria | Human | 2 | No | HKU50T HKU, HKU46 HKU | ||
| Gordonia humi | No | |||||||
| Gordonia hydrophobica | No | |||||||
| Gordonia kroppenstedtii | No | |||||||
| Gordonia lacunae | No | NRRL B-24551T HKU | ||||||
| Gordonia malaquae | No | |||||||
| Gordonia namibiensis | No | |||||||
| Gordonia neofelifaecis | No | |||||||
| Gordonia otitidis | No | |||||||
| Gordonia paraffinivorans | No | |||||||
| Gordonia polyisoprenivorans | No | |||||||
| Gordonia rhizosphera | No | |||||||
| Gordonia rubripertincta | Yes | B310 UFL, B302 UFL, DSM 43197T DSM, DSM 43240 DSM, DSM 43248 DSM, DSM 43291 DSM, DSM 43303 DSM, DSM 46066 DSM, DSM 46039 DSM, DSM 46038 DSM, DSM 43570 DSM | ||||||
| Gordonia shandongensis | No | |||||||
| Gordonia sihwensis | No | |||||||
| Gordonia sinesedis | No | |||||||
| Gordonia soli | No | |||||||
| Gordonia sputi | Yes | DSM 43022 DSM, DSM 43896T DSM, DSM 44019 DSM, DSM 46016 DSM, DSM 46087 DSM | ||||||
| Gordonia terrae | Yes | DSM 43568 DSM | NRRL B-16283T HKU | |||||
| Gordonia westfalica | No | |||||||
| Gracilibacillus boraciitolerans | No | |||||||
| Gracilibacillus dipsosauri | Yes | DSM 11125T DSM | ||||||
| Gracilibacillus halophilus | No | |||||||
| Gracilibacillus halotolerans | No | |||||||
| Gracilibacillus kekensis | No | |||||||
| Gracilibacillus lacisalsi | No | |||||||
| Gracilibacillus orientalis | No | |||||||
| Gracilibacillus saliphilus | No | |||||||
| Gracilibacillus thailandensis | No | |||||||
| Gracilibacillus ureilyticus | No | |||||||
| Granulicatella adiacens | Might be linked to pancreatic cancer | Gram+, catalase neg, Cocci | Blood, urine, mouth flora | 2 | Yes | 20_A875 MHH, DSM 9848T DSM, 30210_0575_Hemoc IBS, BK04980_09 ERL, 100617_33 PNU, 110324_3 PNU | ||
| Granulicatella balaenopterae | Gram+, catalase neg, Cocci | whale lung | 1 | Yes | DSM 15827T DSM | |||
| Granulicatella elegans | Endocarditis | Gram+, catalase neg, Cocci | Sputum | 2 | Yes | DSM 11693T DSM | ||
| Grimontia hollisae | Yes | LMG 17719T HAM | ||||||
| Guehomyces pullulans | Yeast | Yes | CBS 6321 CBS, CBS 2542 CBS, CBS 2532T CBS | |||||
| Haemophilus aegyptius | No | |||||||
| Haemophilus ducreyi | Yes | DSM 8925T DSM | ||||||
| Haemophilus felis | No | |||||||
| Haemophilus haemoglobinophilus | Yes | CIP 5388 CTL | ||||||
| Haemophilus haemolyticus | 2 | Yes | HH ATCC 33390 SLH, HH AMC 2030823 SLH, DN 726 SLH, DN 658 SLH, DN 639 SLH, DN 636 SLH, DN 624 SLH, DN 161 SLH, DN 140 SLH, DN 136 SLH, DN 121 SLH, DN 108 SLH, DN 105 SLH, DN 093 SLH, DN 075 SLH, DN 073 SLH, DN 062 SLH, DN 037 SLH, DN 014 SLH, DN 005 SLH, CCUG 12834T CCUG | |||||
| Haemophilus influenzae | Yes | ATCC 35056 THL, ATCC 9006 THL, DSM 10000 DSM, DSM 10001 DSM, DSM 11121 DSM, DSM 11969 DSM, DSM 4690T DSM, DSM 9999 DSM, | ||||||
| Haemophilus paracuniculus | No | |||||||
| Haemophilus parahaemolyticus | Yes | DSM 21417T DSM, VP 58527 BOM, VP 58628 BOM, VP 58678 BOM, VP 58684 BOM, VP 59343 BOM | ||||||
| Haemophilus parainfluenzae | Yes | 21086307 MLD, DSM 8978T DSM, VP 58646 BOM, VP 58974 BOM, VP 59143 BOM, P2bue_re2AN USH, VA05021_10 ERL | ||||||
| Haemophilus paraphrohaemolyticus | Yes | CIP 102512T CTL | ||||||
| Haemophilus parasuis | Yes | 11_00501_1 VAXM, 11_00548_02 VAXM, 11_00578_03 VAXM | ||||||
| Haemophilus piscium | No | |||||||
| Haemophilus pittmaniae | Yes | DSM 17240 DSM, VA15632_10 ERL | ||||||
| Hafnia alvei | Yes | 20740_1 CHB, DSM 30097 DSM, DSM 30098 DSM, DSM 30099 DSM, DSM 30101 DSM, DSM 30163T DSM, M110266 LDW | ||||||
| Hafnia paralvei | No | |||||||
| Haloarcula amylolytica | No | |||||||
| Haloarcula argentinensis | No | |||||||
| Haloarcula hispanica | No | |||||||
| Haloarcula japonica | No | |||||||
| Haloarcula marismortui | No | |||||||
| Haloarcula quadrata | No | |||||||
| Haloarcula salaria | No | |||||||
| Haloarcula tradensis | No | |||||||
| Haloarcula vallismortis | Yes | B279 UFL | ||||||
| Halobacterium jilantaiense | No | |||||||
| Halobacterium noricense | No | |||||||
| Halobacterium piscisalsi | No | |||||||
| Halobacterium salinarum | Yes | B277 UFL, B278 UFL | ||||||
| Halobacterium sp | Yes | HB46_B294 UFL | ||||||
| Halococcus dombrowskii | No | |||||||
| Halococcus hamelinensis | No | |||||||
| Halococcus morrhuae | Yes | B270 UFL, B271 UFL, B272 UFL | ||||||
| Halococcus qingdaonensis | No | |||||||
| Halococcus saccharolyticus | No | |||||||
| Halococcus salifodinae | No | |||||||
| Halococcus thailandensis | No | |||||||
| Halomonas alimentaria | No | |||||||
| Halomonas alkaliantarctica | No | |||||||
| Halomonas alkaliphila | No | |||||||
| Halomonas almeriensis | No | |||||||
| Halomonas andesensis | No | |||||||
| Halomonas anticariensis | No | |||||||
| Halomonas aquamarina | Yes | DSM 30161T DSM, DSM 4739 DSM | ||||||
| Halomonas arcis | No | |||||||
| Halomonas axialensis | No | |||||||
| Halomonas boliviensis | No | |||||||
| Halomonas campaniensis | No | |||||||
| Halomonas campisalis | No | |||||||
| Halomonas caseinilytica | No | |||||||
| Halomonas cerina | No | |||||||
| Halomonas cupida | Yes | DSM 4740T DSM | ||||||
| Halomonas daqiaonensis | No | |||||||
| Halomonas daqingensis | No | |||||||
| Halomonas denitrificans | No | |||||||
| Halomonas desiderata | No | |||||||
| Halomonas elongata | Yes | B496 UFL, B558 UFL, B582 UFL | ||||||
| Halomonas eurihalina | No | |||||||
| Halomonas fontilapidosi | No | |||||||
| Halomonas gomseomensis | No | |||||||
| Halomonas gudaonensis | No | |||||||
| Halomonas halmophila | Yes | B508 UFL,B510 UFL | ||||||
| Halomonas halocynthiae | No | |||||||
| Halomonas halodenitrificans | Yes | B505 UFL | ||||||
| Halomonas halodurans | No | |||||||
| Halomonas halophila | No | |||||||
| Halomonas hamiltonii | No | |||||||
| Halomonas hydrothermalis | No | |||||||
| Halomonas ilicicola | No | |||||||
| Halomonas janggokensis | No | |||||||
| Halomonas jeotgali | No | |||||||
| Halomonas johnsoniae | No | |||||||
| Halomonas kenyensis | No | |||||||
| Halomonas koreensis | No | |||||||
| Halomonas korlensis | No | |||||||
| Halomonas kribbensis | No | |||||||
| Halomonas lutea | No | |||||||
| Halomonas magadiensis | No | |||||||
| Halomonas maura | No | |||||||
| Halomonas meridiana | No | |||||||
| Halomonas mongoliensis | No | |||||||
| Halomonas muralis | No | |||||||
| Halomonas neptunia | No | |||||||
| Halomonas nitroreducens | No | |||||||
| Halomonas organivorans | No | |||||||
| Halomonas pacifica | Yes | DSM 4742T DSM | ||||||
| Halomonas pantelleriensis | No | |||||||
| Halomonas rifensis | No | |||||||
| Halomonas sabkhae | No | |||||||
| Halomonas saccharevitans | No | |||||||
| Halomonas salifodinae | No | |||||||
| Halomonas salina | No | |||||||
| Halomonas shengliensis | No | |||||||
| Halomonas sinaiensis | No | |||||||
| Halomonas stenophila | No | |||||||
| Halomonas stevensii | No | |||||||
| Halomonas subglaciescola | No | |||||||
| Halomonas subterranea | No | |||||||
| Halomonas sulfidaeris | No | |||||||
| Halomonas taeanensis | No | |||||||
| Halomonas titanicae | No | |||||||
| Halomonas variabilis | No | |||||||
| Halomonas ventosae | No | |||||||
| Halomonas venusta | Yes | DSM 4743T DSM | ||||||
| Halomonas vilamensis | No | |||||||
| Halomonas xianhensis | No | |||||||
| Halomonas xinjiangensis | No | |||||||
| Halomonas zhanjiangensis | No | |||||||
| Halotalea alkalilenta | Gram- | Yes | CIP 109710T CIP | |||||
| Hannaella luteola | Yeast | Yes | CBS 943T CBS | |||||
| Hanseniaspora lachancei | Yeast | Yes | CBS 8818 11 ERL | |||||
| Hanseniaspora opuntiae | Yes | MY970_2_09 ERL | ||||||
| Helcococcus kunzii | Yes | 02_VA_365906 MVO, 34 PIM, DSM 10548T DSM | ||||||
| Helcococcus ovis | Yes | DSM 21504T DSM | ||||||
| Helcococcus sueciensis | Yes | DSM 17243T DSM | ||||||
| Helicobacter acinonychis | Aerobic and facultative anaerobic Gram- rods | No | ||||||
| Helicobacter anseris | Aerobic and facultative anaerobic Gram- rods | No | ||||||
| Helicobacter aurati | Aerobic and facultative anaerobic Gram- rods | No | ||||||
| Helicobacter baculiformis | Aerobic and facultative anaerobic Gram- rods | No | ||||||
| Helicobacter bilis | Aerobic and facultative anaerobic Gram- rods | No | ||||||
| Helicobacter bizzozeronii | Aerobic and facultative anaerobic Gram- rods | No | ||||||
| Helicobacter brantae | Aerobic and facultative anaerobic Gram- rods | No | ||||||
| Helicobacter canadensis | Aerobic and facultative anaerobic Gram- rods | Yes | NCTC 13242 CBB | |||||
| Helicobacter canis | Cellulitis, bacteremia, gastroenteritis in immunocompromised patients | Aerobic and facultative anaerobic Gram- rods | feces and blood samples | 2 | Yes | CIP 104753T CBB, ZC80F NVU | ||
| Helicobacter cetorum | Aerobic and facultative anaerobic Gram- rods | No | ||||||
| Helicobacter cholecystus | Aerobic and facultative anaerobic Gram- rods | Yes | CIP 105596T CBB | |||||
| Helicobacter cinaedi | Cellulitis, bacteremia, gastroenteritis in immunocompromised patients | Aerobic and facultative anaerobic Gram- rods | feces and blood samples | 2 | Yes | CCUG 18818T NVU, DSM 5359T DSM | ||
| Helicobacter cynogastricus | Aerobic and facultative anaerobic Gram- rods | No | ||||||
| Helicobacter equorum | Aerobic and facultative anaerobic Gram- rods | No | ||||||
| Helicobacter felis | Aerobic and facultative anaerobic Gram- rods | No | ||||||
| Helicobacter fennelliae | Bacteremia, gastroenteritis | Aerobic and facultative anaerobic Gram- rods | feces and blood samples | 2 | Yes | DSM 7491T DSM | ||
| Helicobacter ganmani | Aerobic and facultative anaerobic Gram- rods | No | ||||||
| Helicobacter heilmannii | Aerobic and facultative anaerobic Gram- rods | No | ||||||
| Helicobacter hepaticus | Possible cause of chronic hepatitis, liver cancer and inflammatory bowel disese | Aerobic and facultative anaerobic Gram- rods | Mucosal surfaces, liver samples | 2 | No | |||
| Helicobacter marmotae | Aerobic and facultative anaerobic Gram- rods | No | ||||||
| Helicobacter mastomyrinus | Aerobic and facultative anaerobic Gram- rods | No | ||||||
| Helicobacter mesocricetorum | Aerobic and facultative anaerobic Gram- rods | No | ||||||
| Helicobacter muridarum | Aerobic and facultative anaerobic Gram- rods | No | ||||||
| Helicobacter mustelae | Aerobic and facultative anaerobic Gram- rods | Yes | CIP 103759T CBB | |||||
| Helicobacter pametensis | Aerobic and facultative anaerobic Gram- rods | No | ||||||
| Helicobacter pullorum | Aerobic and facultative anaerobic Gram- rods | Yes | CCUG 33837T NVU, CCUG 33839 CBB, CCUG 33840 CBB, Cb 581_07 NVU, Cb 600_07 NVU, Cb 601_07 NVU, NCTC 13154 CBB, NCTC 13156 CBB, NCTC 13157 CBB | |||||
| Helicobacter pylori | Gastritis, peptic and duodenal ulcers, gastric adenocarcinoma | Aerobic and facultative anaerobic Gram- rods | feces and blood samples | 2 | Yes | 26695_ce PGM, 151 RLT, DSM 10242 DSM, DSM 21031T DSM, DSM 7492 DSM, DSM 9691 DSM, J99 PGM | ||
| Helicobacter rodentium | Aerobic and facultative anaerobic Gram- rods | No | ||||||
| Helicobacter salomonis | Aerobic and facultative anaerobic Gram- rods | No | ||||||
| Helicobacter suis | Aerobic and facultative anaerobic Gram- rods | No | ||||||
| Helicobacter trogontum | Aerobic and facultative anaerobic Gram- rods | No | ||||||
| Helicobacter typhlonius | Aerobic and facultative anaerobic Gram- rods | No | ||||||
| Helococcus kunzii | Yes | VA324_10 ERL | ||||||
| Herbaspirillum aquaticum | Yes | DSM 21191T DSM | ||||||
| Herbaspirillum autotrophicum | Yes | DSM 733 DSM | ||||||
| Herbaspirillum chlorophenolicum | Yes | DSM 17796T DSM | ||||||
| Herbaspirillum frisingense | Yes | DSM 13128T DSM, DSM 13129 DSM | ||||||
| Herbaspirillum hiltneri | Yes | DSM 17495T DSM | ||||||
| Herbaspirillum huttiense | Yes | DSM 10281T HAM | ||||||
| Herbaspirillum huttiense ssp huttiense | Yes | DSM 10281T DSM | ||||||
| Herbaspirillum huttiense ssp putei | Yes | DSM 21883T DSM | ||||||
| Herbaspirillum lusitanum | Yes | DSM 17154T DSM | ||||||
| Herbaspirillum rhizosphaerae | Yes | DSM 21885T DSM | ||||||
| Herbaspirillum rubrisubalbicans | Yes | DSM 11543T DSM, DSM 9440T DSM | ||||||
| Herbaspirillum seropedicae | Yes | DSM 6445T DSM, DSM 6446 DSM, DSM 6447 DSM | ||||||
| Herbaspirillum sp | Yes | DSM 14683 DSM | ||||||
| Herminiimonas arsenicoxydans | Yes | 308 RLT | ||||||
| Herminiimonas fonticola | Yes | 307 RLT | ||||||
| Histophilus somni | Yes | 512 LAL, GD34 GDD | ||||||
| Hydrogenibacillus schlegelii | Mud from geothermally heated soil | 1 | Yes | CIP 106933T CIP | ||||
| Hydrogenophaga atypica | No | |||||||
| Hydrogenophaga bisanensis | No | |||||||
| Hydrogenophaga caeni | No | |||||||
| Hydrogenophaga defluvii | No | |||||||
| Hydrogenophaga flava | Yes | B339 UFL | ||||||
| Hydrogenophaga intermedia | No | |||||||
| Hydrogenophaga palleronii | No | |||||||
| Hydrogenophaga pseudoflava | Yes | B338 UFL | ||||||
| Hydrogenophaga taeniospiralis | No | |||||||
| Hyphomicrobium sp | Yes | MB61 UFL, MB62 UFL, MB64 UFL | ||||||
| Ideonella azotifigens | No | |||||||
| Ideonella dechloratans | Yes | CCUG 30977T PAH | ||||||
| Ignatzschineria cameli | Maggots | No | UAE-HKU57T, UAE-HKU58, UAE-HKU59, UAE-HKU60, UAE-HKU61 | |||||
| Ignatzschineria indica | Maggots | Yes | KCTC 22643T HKU | |||||
| Ignatzschineria larvae | Maggots | No | DSM 13226T HKU | |||||
| Ignatzschineria ureiclastica | Maggots | No | KCTC 22644T HKU | |||||
| Inquilinus ginsengisoli | No | |||||||
| Inquilinus limosus | Yes | DSM 16000T HAM, 21_Typ508 MHH | ||||||
| Iodobacter fluviatilis | Yes | DSM 3764T DSM | ||||||
| Janthinobacterium agaricidamnosum | No | |||||||
| Janthinobacterium lividum | Yes | B379 UFL, CIP 106720T HAM | ||||||
| Jeotgalicoccus aerolatus | Gram+ | No | ||||||
| Jeotgalicoccus coquinae | Gram+ | No | ||||||
| Jeotgalicoccus halophilus | Gram+ | No | ||||||
| Jeotgalicoccus halotolerans | Gram+ | Yes | DSM 17274T DSM | |||||
| Jeotgalicoccus huakuii | Gram+ | No | ||||||
| Jeotgalicoccus marinus | Gram+ | No | ||||||
| Jeotgalicoccus nanhaiensis | Gram+ | No | ||||||
| Jeotgalicoccus pinnipedialis | Gram+ | No | ||||||
| Jeotgalicoccus psychrophilus | Gram+ | No | ||||||
| Joetgalibacillus campisalis | No | |||||||
| Joetgalibacillus marinus | Yes | DSM 1297T DSM | ||||||
| Jonesia denitrificans | Gram+, non-acid-fast, coryneform | Yes | DSM 20603T DSM, CIP 103473T IBS, DSM 10202T DSM | |||||
| Jonesia quinghaiensis | Gram+, non-acid-fast, coryneform | No | ||||||
| Kandleria vitulina | Yes | DSM 20405T DSM | ||||||
| Kazachstania bovina | Yeast | Yes | CBS 2760T CBS | |||||
| Kazachstania telluris group | Yeast (fungus) | Yes | VML | |||||
| Kerstersia gyiorum | Yes | BL_102065 UKH, V669 MCRF | ||||||
| Kingella denitrificans | Aerobic and facultative anaerobic Gram- rods | No | ||||||
| Kingella kingae | Subacute endocarditis | Aerobic and facultative anaerobic Gram- rods | Blood samples, mucosal surfaces | 2 | Yes | RV_4 LBK, DSM 7536T DSM, CCM 6198 CCM, CCM 5679T CCM | ||
| Kingella oralis | Aerobic and facultative anaerobic Gram- rods | Yes | RV_4 LBK, DSM 7536T DSM | |||||
| Kingella potus | Aerobic and facultative anaerobic Gram- rods | Yes | DSM 18304T DSM | |||||
| Kitasatospora arboriphila | Aerobic, Gram+, non-motile, chemo-organotrophic actinomycetes. | No | ||||||
| Kitasatospora atroaurantiaca | Aerobic, Gram+, non-motile, chemo-organotrophic actinomycetes. | No | ||||||
| Kitasatospora azatica | Aerobic, Gram+, non-motile, chemo-organotrophic actinomycetes. | No | ||||||
| Kitasatospora cheerisanensis | Aerobic, Gram+, non-motile, chemo-organotrophic actinomycetes. | No | ||||||
| Kitasatospora cineracea | Aerobic, Gram+, non-motile, chemo-organotrophic actinomycetes. | No | ||||||
| Kitasatospora cystarginea | Aerobic, Gram+, non-motile, chemo-organotrophic actinomycetes. | No | ||||||
| Kitasatospora gansuensis | Aerobic, Gram+, non-motile, chemo-organotrophic actinomycetes. | No | ||||||
| Kitasatospora griseola | Aerobic, Gram+, non-motile, chemo-organotrophic actinomycetes. | No | ||||||
| Kitasatospora kazusensis | Aerobic, Gram+, non-motile, chemo-organotrophic actinomycetes. | No | ||||||
| Kitasatospora kifunensis | Aerobic, Gram+, non-motile, chemo-organotrophic actinomycetes. | No | ||||||
| Kitasatospora mediocidica | Aerobic, Gram+, non-motile, chemo-organotrophic actinomycetes. | No | ||||||
| Kitasatospora niigatensis | Aerobic, Gram+, non-motile, chemo-organotrophic actinomycetes. | No | ||||||
| Kitasatospora nipponensis | Aerobic, Gram+, non-motile, chemo-organotrophic actinomycetes. | No | ||||||
| Kitasatospora paracochleata | Aerobic, Gram+, non-motile, chemo-organotrophic actinomycetes. | No | ||||||
| Kitasatospora paranensis | Aerobic, Gram+, non-motile, chemo-organotrophic actinomycetes. | No | ||||||
| Kitasatospora phosalacinea | Aerobic, Gram+, non-motile, chemo-organotrophic actinomycetes. | Yes | HKI 222 HKJ | |||||
| Kitasatospora putterlickiae | Aerobic, Gram+, non-motile, chemo-organotrophic actinomycetes. | No | ||||||
| Kitasatospora saccharophila | Aerobic, Gram+, non-motile, chemo-organotrophic actinomycetes. | No | ||||||
| Kitasatospora sampliensis | Aerobic, Gram+, non-motile, chemo-organotrophic actinomycetes. | No | ||||||
| Kitasatospora setae | Aerobic, Gram+, non-motile, chemo-organotrophic actinomycetes. | No | ||||||
| Kitasatospora terrestris | Aerobic, Gram+, non-motile, chemo-organotrophic actinomycetes. | No | ||||||
| Kitasatospora viridis | Aerobic, Gram+, non-motile, chemo-organotrophic actinomycetes. | No | ||||||
| Klebsiella granulomatis | Aerobic and facultative anaerobic gram- rods | No | ||||||
| Klebsiella oxytoca | Aerobic and facultative anaerobic gram- rods | Yes | ESBL 30298 PFM, DSM 5175T HAM, ATCC 700324 THL, 35130 PFM, VA20876_1_09 ERL, VA20876_2_09 ERL, VA20879_09 ERL, VA31877_09 ERL | |||||
| Klebsiella pneumoniae | Pneumonia, urinary tract infections | Aerobic and facultative anaerobic gram- rods | Urine samples, mucosal surfaces of the respiratory tract | Yes | RV_BA_03_B LBK, 37924 PFM, 37595 PFM, 37585 PFM | CCUG 45421 SMI, CCUG 56233 SMI, CCUG 58545 SMI, CCUG 58547 SMI, KLIN 700 SMI, KLIN K691 SMI, KLIN K693 SMI, KLIN K695 SMI, KLIN K697 SMI, CCUG 58546 SMI | ||
| Klebsiella pneumoniae ssp ozaenae | Pneumonia, urinary tract infections | Aerobic and facultative anaerobic gram- rods | Urine samples, mucosal surfaces of the respiratory tract | Yes | DSM 16358T HAM, CCM 5792T CCM | |||
| Klebsiella pneumoniae ssp pneumoniae | Pneumonia, urinary tract infections | Aerobic and facultative anaerobic gram- rods | Urine samples, mucosal surfaces of the respiratory tract | Yes | DSM 30104T HAM, 9295_1 CHB | |||
| Klebsiella pneumoniae ssp rhinoscleromatis | Pneumonia, urinary tract infections | Aerobic and facultative anaerobic gram- rods | Urine samples, mucosal surfaces of the respiratory tract | Yes | CCM 5791T CCM, DSM 16231T HAM | |||
| Klebsiella singaporensis | Aerobic and facultative anaerobic gram- rods | No | ||||||
| Klebsiella variicola | Aerobic and facultative anaerobic gram- rods | Yes | DSM 15968T HAM | |||||
| Kloeckera_apiculata[ana] (Hanseniaspora_uvarum[teleo]#) | Fungus | Yes | MY00441_10 ERL, DSM 2768 DSM, DSM 70788 DSM | |||||
| Kluyvera ascorbata | Yes | DSM 4611T HAM, ST280_10 ERL | ||||||
| Kluyvera cryocrescens | Yes | DSM 4588T HAM | ||||||
| Kluyvera georgiana | Yes | DSM 9409T HAM | ||||||
| Kluyvera intermedia | Yes | DSM 4581T DSM, DSM 4581T HAM | ||||||
| Kocuria aegyptia | Gram+, coagulase-negative, coccoid actinobacteria. | Yes | DSM 17006T DSM | |||||
| Kocuria atrinae | Gram+, coagulase-negative, coccoid actinobacteria. | No | ||||||
| Kocuria carniphila | Gram+, coagulase-negative, coccoid actinobacteria. | Yes | DSM 16004T DSM | |||||
| Kocuria flava | Gram+, coagulase-negative, coccoid actinobacteria. | No | ||||||
| Kocuria gwangalliensis | Gram+, coagulase-negative, coccoid actinobacteria. | No | ||||||
| Kocuria halotolerans | Gram+, coagulase-negative, coccoid actinobacteria. | No | ||||||
| Kocuria himachalensis | Gram+, coagulase-negative, coccoid actinobacteria. | Yes | DSM 44905T DSM | |||||
| Kocuria koreensis | Gram+, coagulase-negative, coccoid actinobacteria. | No | ||||||
| Kocuria kristinae | Acute cholecystitis | Gram+, coagulase-negative, coccoid actinobacteria. | Urine | 2 | Yes | N235M19_QSA IBS, IBS, DSM 20321 DSM, DSM 20032T DSM | ||
| Kocuria marina | Gram+, coagulase-negative, coccoid actinobacteria. | Yes | DSM 16420T DSM | |||||
| Kocuria palustris | Gram+, coagulase-negative, coccoid actinobacteria. | Yes | DSM 11925T DSM, CS 676_1 BRB | |||||
| Kocuria polaris | Gram+, coagulase-negative, coccoid actinobacteria. | Yes | DSM 14382T DSM | |||||
| Kocuria rhizophila | Gram+, coagulase-negative, coccoid actinobacteria. | Yes | DSM 46222 DSM, DSM 11926T DSM, DSM 348 DSM | |||||
| Kocuria rosea | Gram+, coagulase-negative, coccoid actinobacteria. | Yes | IMET 11363T HKJ, DSM 20447T DSM, DSM 12801 DSM, DSM 11630 DSM, B331 UFL | |||||
| Kocuria salsicia | Gram+, coagulase-negative, coccoid actinobacteria. | No | ||||||
| Kocuria sp | Gram+, coagulase-negative, coccoid actinobacteria. | Yes | 991600333 LBK, 991400503 LBK | |||||
| Kocuria turfanensis | Gram+, coagulase-negative, coccoid actinobacteria. | No | ||||||
| Kocuria varians | Gram+, coagulase-negative, coccoid actinobacteria. | Yes | DSM 20033T DSM | |||||
| Kytococcus aerolatus | Gram+, coccoid, non-encapsulated, nonmotile, aerobic and catalase-positive cells. | No | ||||||
| Kytococcus schroeteri | Gram+, coccoid, non-encapsulated, nonmotile, aerobic and catalase-positive cells. | Yes | DSM 13884T DSM | |||||
| Kytococcus sedentarius | Gram+, coccoid, non-encapsulated, nonmotile, aerobic and catalase-positive cells. | Yes | IMET 11362T HKJ | |||||
| Lachancea fermentati | Yeast | Yes | DSM 70521 DSM | |||||
| Lachnoanaerobaculum orale | Gram+ | Yes | CCUG 60305T UMU | |||||
| Lachnoanaerobaculum saburreum | Gram+ | Yes | CCUG 28089T UMU | |||||
| Lachnoanaerobaculum umeaense | Gram+ | Yes | CCUG 58757T UMU | |||||
| Lactobacillus acetotolerans | No | null | ||||||
| Lactobacillus acidifarinae | Yes | 108702 CIP | ||||||
| Lactobacillus acidipiscis | Yes | DSM 15353 DSM, DSM 15836T DSM | ||||||
| Lactobacillus acidophilus | Yes | DSM 20079T DSM, DSM 20242 DSM, P3flue_li12AN USH | ||||||
| Lactobacillus agilis | Yes | DSM 20508 DSM, DSM 20509T DSM, DSM 20510 DSM | ||||||
| Lactobacillus algidus | Yes | DSM 15638T DSM | ||||||
| Lactobacillus alimentarius | Yes | DSM 20181 DSM, DSM 20249T DSM | ||||||
| Lactobacillus amylolyticus | Yes | DSM 11664T DSM | ||||||
| Lactobacillus amylophilus | Yes | DSM 20533T DSM | ||||||
| Lactobacillus amylotrophicus | Yes | DSM 20534T DSM | ||||||
| Lactobacillus amylovorus | Yes | DSM 16698 DSM, DSM 20531T DSM, DSM 20532 DSM, DSM 20552 DSM | ||||||
| Lactobacillus animalis | No | |||||||
| Lactobacillus antri | Yes | DSM 16041T DSM, DSM 16042 DSM | ||||||
| Lactobacillus apodemi | Yes | CIP 108913T CIP | ||||||
| Lactobacillus aquaticus | No | |||||||
| Lactobacillus aviarius | No | |||||||
| Lactobacillus aviarius ssp araffinosus | Yes | CIP 103145T CIP | ||||||
| Lactobacillus aviarius ssp aviarius | Yes | DSM 20654 DSM | ||||||
| Lactobacillus bifermentans | Yes | DSM 20003T DSM | ||||||
| Lactobacillus bobalius | No | null | ||||||
| Lactobacillus brevis | Yes | DSM 1267 DSM, DSM 1268 DSM, DSM 20054T DSM, DSM 20556 DSM, DSM 2647 DSM | ||||||
| Lactobacillus buchneri | Yes | DSM 20057T DSM | ||||||
| Lactobacillus cacaonum | No | |||||||
| Lactobacillus camelliae | No | |||||||
| Lactobacillus capillatus | No | null | ||||||
| Lactobacillus casei | Yes | DSM 20011T DSM | ||||||
| Lactobacillus ceti | No | null | ||||||
| Lactobacillus coleohominis | Yes | CIP 106820T CIP | ||||||
| Lactobacillus collinoides | Yes | DSM 20486 DSM, DSM 20515T DSM | ||||||
| Lactobacillus composti | No | |||||||
| Lactobacillus concavus | Yes | DSM 17758T DSM | ||||||
| Lactobacillus coryniformis | No | null | ||||||
| Lactobacillus coryniformis ssp coryniformis | Yes | DSM 20001T DSM, DSM 20007 DSM | ||||||
| Lactobacillus coryniformis ssp torquens | Yes | DSM 20005 DSM, DSM 20004T DSM | ||||||
| Lactobacillus crispatus | Yes | DSM 20356 DSM, DSM 20584T DSM, P10bue_re6AN USH | ||||||
| Lactobacillus crostorum | No | |||||||
| Lactobacillus curvatus | Yes | DSM 20010 DSM, DSM 20019T DSM, DSM 20495 DSM, DSM 20496 DSM, DSM 20499 DSM | ||||||
| Lactobacillus delbrueckii | No | |||||||
| Lactobacillus delbrueckii ssp bulgaricus | Yes | DSM 20081T DSM | ||||||
| Lactobacillus delbrueckii ssp delbrueckii | Yes | DSM 20074T DSM | ||||||
| Lactobacillus delbrueckii ssp indicus | Yes | DSM 15996T DSM | ||||||
| Lactobacillus delbrueckii ssp lactis | Yes | DSM 20072T DSM, DSM 20073 DSM, DSM 20076 DSM, DSM 20355 DSM, CIP 101810 CIP | ||||||
| Lactobacillus dextrinicus | No | null | ||||||
| Lactobacillus diolivorans | Yes | DSM 14421T DSM | ||||||
| Lactobacillus equi | Yes | DSM 15833T DSM | ||||||
| Lactobacillus equicursoris | No | |||||||
| Lactobacillus equigenerosi | No | |||||||
| Lactobacillus fabifermentans | No | null | ||||||
| Lactobacillus farciminis | Yes | CIP 103136T CIP | ||||||
| Lactobacillus farraginis | No | |||||||
| Lactobacillus fermentum | Yes | DSM 20049 DSM, DSM 20055 DSM, DSM 20391 DSM, CIP 102006 CIP | ||||||
| Lactobacillus floricola | No | null | ||||||
| Lactobacillus florum | No | null | ||||||
| Lactobacillus fornicalis | No | |||||||
| Lactobacillus fructivorans | Yes | DSM 20203T DSM, DSM 20350 DSM, DSM 20353 DSM | ||||||
| Lactobacillus frumenti | Yes | CIP 106922T CIP | ||||||
| Lactobacillus fuchuensis | Yes | DSM 14340T DSM, DSM 14342 DSM, DSM 14341 DSM | ||||||
| Lactobacillus futsaii | No | null | ||||||
| Lactobacillus gallinarum | Yes | CIP 103611T CIP | ||||||
| Lactobacillus gasseri | Yes | 47 RLT, DSM 20077 DSM, DSM 20243T DSM, DSM 20604 DSM, UR254_10 ERL, CIP 101909 CIP | ||||||
| Lactobacillus gastricus | Yes | DSM 16045T DSM, DSM 16046 DSM | ||||||
| Lactobacillus ghanensis | No | |||||||
| Lactobacillus gigeriorum | No | null | ||||||
| Lactobacillus graminis | Yes | DSM 20719T DSM | ||||||
| Lactobacillus hammesii | Yes | DSM 16381T DSM, DSM 16382 DSM | ||||||
| Lactobacillus hamsteri | Yes | DSM 5661T DSM | ||||||
| Lactobacillus harbinensis | Yes | DSM 16991T DSM | ||||||
| Lactobacillus hayakitensis | No | null | ||||||
| Lactobacillus helveticus | Yes | DSM 20075T DSM | ||||||
| Lactobacillus hilgardii | Yes | DSM 20051 DSM, DSM 20176T DSM | ||||||
| Lactobacillus homohiochii | Yes | DSM 20354 DSM, DSM 20571T DSM | ||||||
| Lactobacillus hordei | No | |||||||
| Lactobacillus iners | Yes | CIP 105923T CIP | ||||||
| Lactobacillus ingluviei | Yes | DSM 14792 DSM, DSM 15946T DSM | ||||||
| Lactobacillus intestinalis | Yes | DSM 6629T DSM | ||||||
| Lactobacillus jensenii | Yes | 154 RLT, DSM 20557T DSM, 110324_94 PNU | ||||||
| Lactobacillus johnsonii | Yes | DSM 20553 DSM | ||||||
| Lactobacillus kalixensis | Yes | DSM 16043T DSM, DSM 16044 DSM | ||||||
| Lactobacillus kefiranofaciens | No | |||||||
| Lactobacillus kefiranofaciens ssp kefiranofaciens | No | |||||||
| Lactobacillus kefiranofaciens ssp kefirgranum | Yes | DSM 10550T DSM | ||||||
| Lactobacillus kefiri | Yes | DSM 20485 DSM, DSM 20587T DSM, DSM 20588 DSM | ||||||
| Lactobacillus kimchicus | No | |||||||
| Lactobacillus kimchii | Yes | DSM 13961T DSM | ||||||
| Lactobacillus kisonensis | No | null | ||||||
| Lactobacillus kitasatonis | Yes | DSM 16761T DSM | ||||||
| Lactobacillus koreensis | No | |||||||
| Lactobacillus kunkeei | Yes | DSM 12361T DSM | ||||||
| Lactobacillus leichmannii | No | |||||||
| Lactobacillus lindneri | Yes | DSM 20690T DSM, DSM 20692 DSM | ||||||
| Lactobacillus malefermentans | Yes | DSM 20177 DSM, DSM 20570 DSM, DSM 5705T DSM | ||||||
| Lactobacillus mali | Yes | DSM 20444T DSM, DSM 20483 DSM | ||||||
| Lactobacillus manihotivorans | Yes | CIP 105851T CIP | ||||||
| Lactobacillus mindensis | Yes | DSM 14500T DSM | ||||||
| Lactobacillus mucosae | Yes | DSM 13345T DSM | ||||||
| Lactobacillus murinus | Yes | DSM 20452T DSM, DSM 20453 DSM | ||||||
| Lactobacillus nagelii | Yes | DSM 13675T DSM | ||||||
| Lactobacillus namurensis | No | |||||||
| Lactobacillus nantensis | Yes | DSM 16982T DSM | ||||||
| Lactobacillus nasuensis | No | |||||||
| Lactobacillus nodensis | No | |||||||
| Lactobacillus odoratitofui | No | |||||||
| Lactobacillus oeni | No | null | ||||||
| Lactobacillus oligofermentans | Yes | DSM 15704 DSM, DSM 15705 DSM, DSM 15708 DSM, DSM 15709 DSM | ||||||
| Lactobacillus oris | Yes | DSM 4865 DSM, DSM 4866 DSM | ||||||
| Lactobacillus otakiensis | No | null | ||||||
| Lactobacillus ozensis | No | null | ||||||
| Lactobacillus panis | Yes | DSM 6035T DSM | ||||||
| Lactobacillus pantheris | Yes | DSM 15945T DSM | ||||||
| Lactobacillus parabrevis | No | |||||||
| Lactobacillus parabuchneri | Yes | DSM 5987 DSM, DSM 15352 DSM, DSM 5706 DSM, DSM 5707T DSM, DSM 5708 DSM | ||||||
| Lactobacillus paracasei ssp paracasei | Yes | DSM 20006 DSM, DSM 20008 DSM, DSM 20020 DSM, DSM 20207 DSM, DSM 20244 DSM, DSM 20312 DSM, DSM 2649 DSM, DSM 46331 DSM, DSM 5622T DSM, DSM 5457 DSM, DSM 8742 DSM, DSM 8741 DSM, CIP 102309 CIP | ||||||
| Lactobacillus paracasei ssp tolerans | Yes | DSM 20012 DSM, DSM 20258T DSM | ||||||
| Lactobacillus paracollinoides | Yes | DSM 15502T DSM | ||||||
| Lactobacillus parafarraginis | No | null | ||||||
| Lactobacillus parakefiri | Yes | DSM 10551T DSM | ||||||
| Lactobacillus paralimentarius | Yes | DSM 13238T DSM | ||||||
| Lactobacillus paraplantarum | Yes | DSM 10641 DSM, DSM 10667T DSM | ||||||
| Lactobacillus paucivorans | No | |||||||
| Lactobacillus pentosus | Yes | DSM 20199 DSM, DSM 16366 DSM, DSM 20314T DSM | ||||||
| Lactobacillus perolens | Yes | DSM 12744T DSM, DSM 12745 DSM | ||||||
| Lactobacillus plantarum | Yes | DSM 1055 DSM, DSM 12028 DSM, DSM 13273 DSM, DSM 20205 DSM, DSM 20246 DSM, DSM 2601 DSM, DSM 2648 DSM | ||||||
| Lactobacillus plantarum ssp argentoratensis | Yes | DSM 16365T DSM | ||||||
| Lactobacillus plantarum ssp plantarum | Yes | DSM 20174T DSM | ||||||
| Lactobacillus pobuzihii | No | |||||||
| Lactobacillus pontis | Yes | DSM 8475T DSM | ||||||
| Lactobacillus psittaci | Yes | CIP 106492 CIP | ||||||
| Lactobacillus rapi | No | |||||||
| Lactobacillus rennini | Yes | DSM 20253T DSM, DSM 20254 DSM | ||||||
| Lactobacillus reuteri | Yes | DSM 20015 DSM, DSM 20016T DSM, DSM 20053 DSM, DSM 20056 DSM, DSM 8534 DSM | ||||||
| Lactobacillus rhamnosus | Yes | CIP A157T CIP, DSM 20021T DSM, CIP 102623 CIP | ||||||
| Lactobacillus rogosae | No | |||||||
| Lactobacillus rossiae | Yes | DSM 15814T DSM | ||||||
| Lactobacillus ruminis | Yes | DSM 20403T DSM, DSM 20511 DSM, DSM 20404 DSM | ||||||
| Lactobacillus saerimneri | Yes | DSM 16049T DSM, DSM 16027 DSM | ||||||
| Lactobacillus sakei | Yes | DSM 6333 DSM, DSM 20497 DSM, DSM 20494 DSM, DSM 20101 DSM, DSM 20100 DSM | ||||||
| Lactobacillus sakei ssp carnosus | Yes | DSM 15740 DSM, DSM 15831T DSM | ||||||
| Lactobacillus sakei ssp sakei | Yes | DSM 20017T DSM | ||||||
| Lactobacillus salivarius | Yes | DSM 20555T DSM, DSM 20492 DSM, DSM 20554 DSM | ||||||
| Lactobacillus sanfranciscensis | Yes | DSM 20451T DSM, DSM 20663 DSM | ||||||
| Lactobacillus saniviri | No | |||||||
| Lactobacillus satsumensis | Yes | DSM 16230T DSM | ||||||
| Lactobacillus secaliphilus | No | |||||||
| Lactobacillus selangorensis | No | |||||||
| Lactobacillus senioris | No | |||||||
| Lactobacillus senmaizukei | No | null | ||||||
| Lactobacillus sharpeae | Yes | DSM 20504 DSM, DSM 20505T DSM, DSM 20506 DSM, DSM 20507 DSM | ||||||
| Lactobacillus siliginis | No | null | ||||||
| Lactobacillus similis | No | null | ||||||
| Lactobacillus sp | Yes | CIP 100850 CIP, CIP 101430 CIP, CIP 103701 CIP, DSM 10125 DSM | ||||||
| Lactobacillus spicheri | Yes | DSM 15429T DSM | ||||||
| Lactobacillus sucicola | No | |||||||
| Lactobacillus suebicus | Yes | DSM 5008 DSM, DSM 5007T DSM | ||||||
| Lactobacillus sunkii | No | null | ||||||
| Lactobacillus taiwanensis | No | |||||||
| Lactobacillus thailandensis | No | |||||||
| Lactobacillus tucceti | No | null | ||||||
| Lactobacillus ultunensis | Yes | DSM 16048 DSM, DSM 16047T DSM | ||||||
| Lactobacillus uvarum | No | null | ||||||
| Lactobacillus vaccinostercus | Yes | DSM 20634T DSM, DSM 15802T DSM | ||||||
| Lactobacillus vaginalis | Yes | CIP 105932T CIP, P10bue_re1AN USH, P10bue_re4AN USH, P4bue_li2AN USH | null | |||||
| Lactobacillus versmoldensis | Yes | DSM 14857T DSM | ||||||
| Lactobacillus vini | Yes | DSM 20605T DSM | ||||||
| Lactobacillus xiangfangensis | No | |||||||
| Lactobacillus zeae | Yes | DSM 20178T DSM | ||||||
| Lactobacillus zymae | Yes | CIP 108703T CIP | ||||||
| Lactococcus chungangensis | No | |||||||
| Lactococcus fujiensis | No | |||||||
| Lactococcus garvieae | Yes | DSM 20684T DSM, DSM 6783 DSM | ||||||
| Lactococcus lactis | Yes | IBS_MS_6 IBS | ||||||
| Lactococcus lactis ssp cremoris | Yes | DSM 20069T DSM, DSM 20388 DSM | ||||||
| Lactococcus lactis ssp hordniae | No | null | ||||||
| Lactococcus lactis ssp lactis | Yes | 3C1_QSA IBS, DSM 20175 DSM, DSM 20384 DSM, DSM 20481T DSM, DSM 20661 DSM | ||||||
| Lactococcus lactis ssp tructae | No | |||||||
| Lactococcus piscium | Yes | DSM 6634T LGL | ||||||
| Lactococcus plantarum | Yes | DSM 20686T DSM | ||||||
| Lactococcus raffinolactis | Yes | DSM 20443T DSM | ||||||
| Laribacter hongkongensis | Gram- | Yes | DSM 14985T DSM | |||||
| Lecanicillium tenuipes | Fungus | Spider | 1 | No | CBS 658.80 HKU | |||
| Lechevalieria aerocolonigenes | No | |||||||
| Lechevalieria atacamensis | No | null | ||||||
| Lechevalieria deserti | No | null | ||||||
| Lechevalieria flava | Yes | IMET 9748T HKJ | ||||||
| Lechevalieria fradiae | No | |||||||
| Lechevalieria roselyniae | No | null | ||||||
| Lechevalieria xinjiangensis | No | null | ||||||
| Leclercia adecarboxylata | Yes | CCM 4443 CCM, DSM 5077T HAM | ||||||
| Lecythophora hoffmannii | Fungus | Yes | 118 VML | |||||
| Legionella adelaidensis | Aerobic and facultative anaerobic Gram- rods | 2 | No | CCUG 31231B SMI | ||||
| Legionella anisa | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | ATCC 35290 YH VUN, ATCC 35291 TW VUN, ATCC 35292T YH VUN, DSM 17627T DSM, LB_105416_09 ERL, LP0076 TW VUN, LP0086 TW VUN, LP0109 TW VUN | SMI L019 SMI, ATCC 35292 SMI | |||
| Legionella beliardensis | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | CCUG 45921T TW VUN | ||||
| Legionella birminghamiensis | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | ATCC 43702T TW VUN, ATCC 700709 TW VUN, DSM 19232T DSM | ATCC 43702 SMI, ATCC 43702 SMI | |||
| Legionella bozemanii | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | ATCC 35545 TW VUN, ATCC 33217T TW VUN, CCUG 48836 TW VUN, CCUG 31569 TW VUN | SMI L020 SMI, ATCC 35545 SMI, SMI F41ENK SMI, SMI F41ENK-M SMI, SMI L003 SMI, SMI L004 SMI, SMI L008 SMI, SMI L010 SMI, SMI L011 SMI, ATCC 33217 SMI, SMI L027 SMI, SMI L028 SMI | |||
| Legionella brunensis | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | DSM 19236T DSM, BCRC 17046T TW VUN | ||||
| Legionella busanensis | Aerobic and facultative anaerobic Gram- rods | 2 | No | |||||
| Legionella cherrii | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | BCRC 17044T TW VUN, DSM 19213T DSM | ATCC35252 SMI | |||
| Legionella cincinnatiensis | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | DSM 19233T DSM, TW VUN | ATCC 43753 SMI | |||
| Legionella drancourtii | Aerobic and facultative anaerobic Gram- rods | 2 | No | |||||
| Legionella dresdenensis | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | DSM 19488T TUD | CCUG 59858 SMI | |||
| Legionella drozanskii | Aerobic and facultative anaerobic Gram- rods | 2 | No | CCUG 43885 SMI | ||||
| Legionella dumoffii | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | 25 RLT, 26 RLT, ATCC 33279T TW VUN, CCUG 47789 TW VUN, LGNPNHL2003013 TW VUN, LGNPNHL2004005 TW VUN | ATCC 33279 SMI | |||
| Legionella erythra | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | CCUG 29667T TW VUN | ATCC 35303 SMI | |||
| Legionella fallonii | Aerobic and facultative anaerobic Gram- rods | 2 | No | CCUG 43887 SMI | ||||
| Legionella feeleii | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | ATCC 35072T TW VUN, ATCC 35849 TW VUN, ATCC 700513 TW VUN, ATCC 700514 TW VUN, DSM 17645T DSM, LP0050 TW VUN | SMI L015 SMI, SMI L016 SMI, SMI L017 SMI | |||
| Legionella geestiana | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | ATCC 49504T TUD | CCUG 44893 SMI | |||
| Legionella gormanii | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | ATCC 43769 TW VUN, ATCC 33297T TW VUN | SMI L006 SMI, ATCC 33297 SMI, SMI L024 SMI | |||
| Legionella gratiana | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | ATCC 49413T TUD | CCUG 44894 SMI | |||
| Legionella gresilensis | Aerobic and facultative anaerobic Gram- rods | 2 | No | CCUG 45920 SMI | ||||
| Legionella hackeliae | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | DSM 19214T DSM | ATCC 35250 SMI | |||
| Legionella impletisoli | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | DSM 18493T DSM | ||||
| Legionella israelensis | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | CCUG 31115T TW VUN | ATCC 43119 SMI | |||
| Legionella jamestowniensis | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | DSM 19215T DSM | ||||
| Legionella jordanis | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | ATCC 33623T TW VUN, ATCC 700762 TW VUN | ATCC 33623 SMI, 4308I SMI | |||
| Legionella lansingensis | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | ATCC 49751T TW VUN | ||||
| Legionella londiniensis | Aerobic and facultative anaerobic Gram- rods | 2 | No | ATCC 700510 SMI | ||||
| Legionella longbeachae | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | ATCC 33462T TW VUN, ATCC 33484 TW VUN, CCUG 28612 TW VUN, DSM 10572T DSM | SMI L001 SMI, SMI L002 SMI, ATCC 33484 SMI, ATCC 33462 SMI | |||
| Legionella lytica | Aerobic and facultative anaerobic Gram- rods | 2 | No | |||||
| Legionella maceachernii | 2 | Yes | 28 RLT | SMI 4270I SMI | ||||
| Legionella macheachernii | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | 28 RLT | ||||
| Legionella moravica | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | DSM 19234T DSM | ||||
| Legionella nagasakiensis | Aerobic and facultative anaerobic Gram- rods | 2 | No | |||||
| Legionella nautarum | Aerobic and facultative anaerobic Gram- rods | 2 | No | CCUG 44900 SMI | ||||
| Legionella norrlandica | Aerobic and facultative anaerobic Gram- rods | Biopurification tanks of wood processing plants | 2 | No | SMI 4329II SMI, SMI, SMI 4327I SMI, SMI LEGN SMI | |||
| Legionella oakridgensis | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | ATCC 700515 TW VUN | SMI L012 SMI, SMI L013 SMI, ATCC 33761 SMI | |||
| Legionella parisiensis | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | DSM 19216T DSM | ATCC 35299 SMI | |||
| Legionella pneumophila | Legionella (pneumonia), Pontiac fever | Aerobic and facultative anaerobic Gram- rods | environmental samples, mucosal serfaces | 2 | Yes | LGN_PNHL_2004_146 TW VUN, LGN_PNHL_2003_058 TW VUN, LGN_PNHL_2003_057 TW VUN | ATCC 33152 SMI, HPA EQA1 SMI | |
| Legionella pneumophila ssp fraseri | Legionella (pneumonia), Pontiac fever | Aerobic and facultative anaerobic Gram- rods | environmental samples, mucosal serfaces | 2 | Yes | ATCC 35251 TW VUN, ATCC 33216 TW VUN, DSM 7514T DSM | ATCC 33156 SMI, ATCC 33216 SMI | |
| Legionella pneumophila ssp pascullei | Legionella (pneumonia), Pontiac fever | Aerobic and facultative anaerobic Gram- rods | environmental samples, mucosal serfaces | 2 | Yes | DSM 7515T DSM | ||
| Legionella pneumophila ssp pneumophila | Legionella (pneumonia), Pontiac fever | Aerobic and facultative anaerobic Gram- rods | environmental samples, mucosal serfaces | 2 | Yes | ATCC 33152T THL, ATCC 33154 TW VUN, ATCC 33155 TW VUN, ATCC 35096 TW VUN, ATCC 43283 TW VUN | ATCC 33823 SMI, ATCC 43111 SMI, OLDA ATCC 43109 SMI, NCTC 11191 SMI, ATCC 33154 SMI, ATCC 33215 SMI, ATCC 35096 SMI, ATCC 43283 SMI, ATCC 43290 SMI, ATCC 43703 SMI | |
| Legionella quateirensis | Aerobic and facultative anaerobic Gram- rods | 2 | No | CCUG 44899 SMI | ||||
| Legionella quinlivanii | Aerobic and facultative anaerobic Gram- rods | 2 | No | ATCC 43830 SMI | ||||
| Legionella rowbothamii | Aerobic and facultative anaerobic Gram- rods | 2 | No | CCUG 43886 SMI | ||||
| Legionella rubrilucens | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | DSM 11884T DSM | SMI L014 SMI, SMI L022 SMI, SMI L023 SMI, SMI L026 SMI, SMI L021 SMI, SMI L014 SMI | |||
| Legionella sainthelensi | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | ATCC 35248T TW VUN, ATCC 49322 TW VUN, DSM 19231T DSM | SMI L025 SMI | |||
| Legionella santicrucis | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | 31 RLT, 32 RLT, DSM 23075T DSM | ||||
| Legionella shakespearei | Aerobic and facultative anaerobic Gram- rods | 2 | No | CCUG 31228A SMI | ||||
| Legionella sp | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | LB_105290_09 ERL | ||||
| Legionella spiritensis | Aerobic and facultative anaerobic Gram- rods | 2 | No | ATCC 35249 SMI | ||||
| Legionella steigerwaltii | Aerobic and facultative anaerobic Gram- rods | 2 | No | CCUG 56441 SMI | ||||
| Legionella taurinensis | Aerobic and facultative anaerobic Gram- rods | 2 | No | SMI L005 SMI, CCUG 44901 SMI | ||||
| Legionella tucsonensis | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | ATCC 49180T TW VUN, DSM 19246T DSM | ATCC 49180 SMI | |||
| Legionella wadsworthii | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | ATCC 33877T TW VUN | ATCC 33877 SMI | |||
| Legionella waltersii | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | ATCC 51914 TUD | CCUG 44924 SMI | |||
| Legionella worsleiensis | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | ATCC 49508T TUD | CCUG 44923 SMI | |||
| Legionella yabuuchiae | Aerobic and facultative anaerobic Gram- rods | 2 | Yes | DSM 18492T DSM | ||||
| Leifsonia antarctica | No | |||||||
| Leifsonia aquatica | Yes | DSM 20146T DSM | ||||||
| Leifsonia bigeumensis | No | |||||||
| Leifsonia cynodontis | No | |||||||
| Leifsonia kafniensis | No | |||||||
| Leifsonia kribbensis | No | |||||||
| Leifsonia lichenia | No | |||||||
| Leifsonia naganoensis | No | |||||||
| Leifsonia pindariensis | No | |||||||
| Leifsonia poae | No | |||||||
| Leifsonia psychrotolerans | No | |||||||
| Leifsonia rubra | No | |||||||
| Leifsonia shinshuensis | No | |||||||
| Leifsonia soli | No | |||||||
| Leifsonia xyli | No | |||||||
| Leifsonia xyli ssp. cynodontis | No | |||||||
| Leifsonia xyli ssp. xyli | No | |||||||
| Leminorella grimontii | Yes | DSM 5078T HAM | ||||||
| Leminorella richardii | Yes | DSM 14849T HAM | ||||||
| Leptospira alexanderi | Gram-, obligate aerobe spirochete | No | ||||||
| Leptospira biflexa | Gram-, obligate aerobe spirochete | No | ||||||
| Leptospira borgpetersenii | Gram-, obligate aerobe spirochete | No | ||||||
| Leptospira broomii | Gram-, obligate aerobe spirochete | No | ||||||
| Leptospira fainei | Gram-, obligate aerobe spirochete | No | ||||||
| Leptospira inadai | Gram-, obligate aerobe spirochete | No | ||||||
| Leptospira interrogans | Leptosporiosis | Gram-, obligate aerobe spirochete | 2 | No | ||||
| Leptospira kirschneri | Gram-, obligate aerobe spirochete | No | ||||||
| Leptospira kmetyi | Gram-, obligate aerobe spirochete | No | ||||||
| Leptospira licerasiae | Gram-, obligate aerobe spirochete | No | ||||||
| Leptospira meyeri | Gram-, obligate aerobe spirochete | No | ||||||
| Leptospira noguchii | Gram-, obligate aerobe spirochete | No | ||||||
| Leptospira santarosai | Gram-, obligate aerobe spirochete | No | ||||||
| Leptospira weilii | Gram-, obligate aerobe spirochete | No | ||||||
| Leptospira wolbachii | Gram-, obligate aerobe spirochete | No | ||||||
| Leptospira wolffii | Gram-, obligate aerobe spirochete | No | ||||||
| Leptothrix cholodnii | No | |||||||
| Leptothrix discophora | No | |||||||
| Leptothrix lopholea | No | |||||||
| Leptothrix mobilis | Yes | DSMZ 10617T_803 PAH, DSMZ 10617T_R2A PAH | ||||||
| Leptothrix ochracea | No | |||||||
| Leptotrichia sp | Yes | 1A12043482_3e MVD | ||||||
| Leptotrichia trevisanii | Yes | P6flue_li2AN USH, P6flue_li3AN USH | ||||||
| Leptotrichia wadei | Yes | P3bue_re2AN USH | ||||||
| Leucobacter aerolatus | Gram+ | No | ||||||
| Leucobacter albus | Gram+ | No | ||||||
| Leucobacter alluvii | Gram+ | No | ||||||
| Leucobacter aridicollis | Gram+ | No | ||||||
| Leucobacter celer | Gram+ | No | ||||||
| Leucobacter chironomi | Gram+ | Yes | DSM 19883T DSM | |||||
| Leucobacter chromiireducens | Gram+ | No | ||||||
| Leucobacter chromiireducens subsp. chromiireducens | Gram+ | No | ||||||
| Leucobacter chromiireducens subsp. solipictus | Gram+ | No | ||||||
| Leucobacter chromiiresistens | Gram+ | No | ||||||
| Leucobacter denitrificans | Gram+ | Yes | DSM 25936T DSM | |||||
| Leucobacter exalbidus | Gram+ | No | ||||||
| Leucobacter iarius | Gram+ | No | ||||||
| Leucobacter komagatae | Gram+ | No | ||||||
| Leucobacter luti | Gram+ | No | ||||||
| Leucobacter salsicius | Gram+ | No | ||||||
| Leucobacter tardus | Gram+ | No | ||||||
| Leuconostoc carnosum | Yes | DSM 5576T LGL | ||||||
| Leuconostoc citreum | Yes | 24_A354 MHH, DSM 20188 DSM, DSM 5577T DSM, RV_3 LBK | ||||||
| Leuconostoc fallax | No | |||||||
| Leuconostoc gasicomitatum | No | |||||||
| Leuconostoc gelidum | Yes | DSM 5578T LGL | ||||||
| Leuconostoc holzapfelii | Yes | DSM 21478T LGL | ||||||
| Leuconostoc inhae | Yes | DSM 15101T LGL | ||||||
| Leuconostoc kimchii | No | |||||||
| Leuconostoc lactis | Yes | DSM 20192 DSM, DSM 20202T DSM, DSM 8581 DSM | ||||||
| Leuconostoc mesenteroides ssp cremoris | Yes | DSM 20200 DSM, DSM 20346T DSM | ||||||
| Leuconostoc mesenteroides ssp dextranicum | Yes | DSM 20187 DSM | ||||||
| Leuconostoc mesenteroides ssp mesenteroides | Yes | DSM 20240 DSM, DSM 20241 DSM, DSM 20343T DSM | ||||||
| Leuconostoc miyukkimchii | No | |||||||
| Leuconostoc palmae | Yes | DSM 21144T LGL | ||||||
| Leuconostoc pseudomesenteroides | Yes | DSM 20193T DSM, DSM 5624 DSM | ||||||
| Listeria grayi | Yes | DSM 20596 DSM, DSM 20601T DSM | ||||||
| Listeria innocua | Yes | DSM 20649T DSM | ||||||
| Listeria ivanovii ssp ivanovii | Yes | DSM 20750T DSM | ||||||
| Listeria ivanovii ssp londoniensis | Yes | DSM 12491T DSM | ||||||
| Listeria marthii | No | |||||||
| Listeria monocytogenes | Yes | DSM 20600T DSM, Mb19348_1 CHB, ser4B ATCC 19115 THL, CCUG 61052 CCUG, CCUG 59664 CCUG, CCUG 53269 CCUG, CCUG 49753 CCUG, CCUG 35751 CCUG, CCUG 33548 CCUG, CCUG 32964A CCUG, CCUG 32843 CCUG, CCUG 31527 CCUG | ||||||
| Listeria rocourtiae | No | |||||||
| Listeria seeligeri | Yes | DSM 20751T DSM | ||||||
| Listeria welshimeri | Yes | DSM 20650T DSM | ||||||
| Lodderomyces elongisporus | Fungus | Yes | CBS 2605T CBS | |||||
| Luteibacter rhizovicinus | Yes | W24351_2 CHOA | ||||||
| Lysinibacillus boronitolerans | Yes | DSM 17140T DSM | ||||||
| Lysinibacillus fusiformis | Yes | DSM 2898T DSM | ||||||
| Lysinibacillus macroides | No | |||||||
| Lysinibacillus parviboronicapiens | No | |||||||
| Lysinibacillus sphaericus | Yes | DSM 28T DSM, B323 UFL | ||||||
| Lysinibacillus xylanilyticus | No | |||||||
| Macrococcus bovicus | No | |||||||
| Macrococcus brunensis | No | |||||||
| Macrococcus carouselicus | No | |||||||
| Macrococcus caseolyticus | Yes | 5B2_QSA IBS, 5D3_QSA IBS, DSM 20597T DSM | ||||||
| Macrococcus equipercicus | No | |||||||
| Macrococcus hajekii | No | |||||||
| Macrococcus lamae | No | |||||||
| Magnusiomyces capitatus | Fungus | Yes | 258 PSB, 32 PIM, 281 PSB, RV_2_2005 AUR | |||||
| Malassezia furfur | Fungus | Yes | DSM 6170 DSM | |||||
| Malassezia pachydermatis | Fungus | Yes | VML | |||||
| Malikia granosa | No | |||||||
| Malikia spinosa | Yes | DSM 15801T HAM | ||||||
| Mannheimia caviae | No | |||||||
| Mannheimia glucosida | Yes | DSM 19638T DSM | ||||||
| Mannheimia granulomatis | Yes | DSM 19156T DSM | ||||||
| Mannheimia haemolytica | Yes | DSM 5283 DSM, 535 LAL, DSM 10531T DSM, GD44 GDD | ||||||
| Mannheimia ruminalis | No | |||||||
| Mannheimia varigena | Yes | DSM 19166T DSM | ||||||
| Marinilactibacillus psychrotolerans | 2 | Yes | CIP 102166 CIP | |||||
| Massilia aerilata | No | |||||||
| Massilia albidiflava | No | |||||||
| Massilia alkalitolerans | No | |||||||
| Massilia aurea | No | |||||||
| Massilia brevitalea | No | |||||||
| Massilia consociata | No | |||||||
| Massilia dura | No | |||||||
| Massilia flava | No | |||||||
| Massilia haematophila | No | null | ||||||
| Massilia jejuensis | No | null | ||||||
| Massilia lutea | No | null | ||||||
| Massilia niabensis | No | null | ||||||
| Massilia niastensis | No | null | ||||||
| Massilia oculi | No | null | ||||||
| Massilia plicata | No | null | ||||||
| Massilia sp | Yes | 992100145_2 LBK | ||||||
| Massilia suwonensis | No | null | ||||||
| Massilia timonae | Yes | VA_23089_03 17 UKE, 993500981 LBK, 86 PIM | ||||||
| Massilia varians | No | null | ||||||
| Megamonas sp[2] | Yes | 07_136 N2 IBS | ||||||
| Megasphaera micronuciformis | Yes | P5bue_3_5_2AN USH | null | |||||
| Mesoplasma entemophilum | No | |||||||
| Mesoplasma florum | No | |||||||
| Mesoplasma seiffertii | No | |||||||
| Mesorhizobium albiziae | No | null | ||||||
| Mesorhizobium alhagi | No | |||||||
| Mesorhizobium amorphae | No | |||||||
| Mesorhizobium australicum | No | |||||||
| Mesorhizobium camelthorni | No | |||||||
| Mesorhizobium caraganae | No | null | ||||||
| Mesorhizobium chacoense | No | null | ||||||
| Mesorhizobium ciceri | No | null | ||||||
| Mesorhizobium gobiense | No | null | ||||||
| Mesorhizobium huakuii | No | null | ||||||
| Mesorhizobium loti | Yes | DSM 2626T DSM | ||||||
| Mesorhizobium mediterraneum | No | null | ||||||
| Mesorhizobium metallidurans | No | null | ||||||
| Mesorhizobium opportunistum | No | null | ||||||
| Mesorhizobium plurifarium | No | null | ||||||
| Mesorhizobium robiniae | No | |||||||
| Mesorhizobium septentrionale | No | null | ||||||
| Mesorhizobium shangrilense | No | null | ||||||
| Mesorhizobium tarimense | No | null | ||||||
| Mesorhizobium temperatum | No | null | ||||||
| Mesorhizobium thiogangeticum | No | null | ||||||
| Mesorhizobium tianshanense | No | null | ||||||
| Methanomonas methylovora | Yes | MB69 UFL | ||||||
| Methanomonas methylovora ssp thiaminophila | Yes | MB68 UFL | ||||||
| Methylarcula marina | Yes | B512 UFL | ||||||
| Methylarcula terricola | Yes | B511 UFL | ||||||
| Methylobacillus flagellatus | No | null | ||||||
| Methylobacillus glycogenes | Yes | MB127 UFL | ||||||
| Methylobacillus pratensis | No | |||||||
| Methylobacillus sp | Yes | MB118 UFL | ||||||
| Methylobacillus sp (glycogenes) | Yes | MB50 UFL, MB53 UFL | ||||||
| Methylobacterium adhaesivum | No | null | ||||||
| Methylobacterium aerolatum | No | |||||||
| Methylobacterium aminovorans | No | null | ||||||
| Methylobacterium aquaticum | No | |||||||
| Methylobacterium brachiatum | No | |||||||
| Methylobacterium bullatum | No | null | ||||||
| Methylobacterium cerastii | No | null | ||||||
| Methylobacterium chloromethanicum | No | null | ||||||
| Methylobacterium dichloromethanicum | No | null | ||||||
| Methylobacterium extorquens | Yes | MB123 UFL, MB125 UFL, MB65 UFL, MB66 UFL, MB66 UFL, MB72 UFL, MB91 UFL | ||||||
| Methylobacterium fujisawaense | Yes | B235 UFL | ||||||
| Methylobacterium gossipiicola | No | null | ||||||
| Methylobacterium gregans | No | null | ||||||
| Methylobacterium hispanicum | No | null | ||||||
| Methylobacterium iners | No | |||||||
| Methylobacterium isbiliense | No | |||||||
| Methylobacterium jeotgali | No | null | ||||||
| Methylobacterium komagatae | No | null | ||||||
| Methylobacterium longum | No | null | ||||||
| Methylobacterium lusitanum | No | null | ||||||
| Methylobacterium marchantiae | No | null | ||||||
| Methylobacterium mesophilicum | Yes | MB162 UFL | ||||||
| Methylobacterium nodulans | No | null | ||||||
| Methylobacterium organophilum | Yes | MB67 UFL | ||||||
| Methylobacterium oryzae | No | null | ||||||
| Methylobacterium persicinum | No | null | ||||||
| Methylobacterium phyllosphaerae | No | |||||||
| Methylobacterium platani | No | null | ||||||
| Methylobacterium podarium | No | |||||||
| Methylobacterium populi | No | null | ||||||
| Methylobacterium radiotolerans | Yes | B236 UFL | ||||||
| Methylobacterium rhodesianum | Yes | B237 UFL, MB90 UFL, MB92 UFL, MB93 UFL, MB99 UFL, MB96 UFL, MB94 UFL | ||||||
| Methylobacterium rhodinum | Yes | MB161 UFL | ||||||
| Methylobacterium salsuginis | No | null | ||||||
| Methylobacterium sp | Yes | DSM 1857 DSM, Isolat_CAR HED, %5B2%5D CS 684_2 BRB | ||||||
| Methylobacterium suomiense | No | |||||||
| Methylobacterium tardum | No | |||||||
| Methylobacterium thiocyanatum | No | |||||||
| Methylobacterium variabile | No | null | ||||||
| Methylobacterium zatmanii | Yes | B234 UFL | ||||||
| Microbacterium aerolatum | Yes | DSM 14217T DSM | ||||||
| Microbacterium agarici | No | null | ||||||
| Microbacterium aoyamense | No | null | ||||||
| Microbacterium aquimaris | No | null | ||||||
| Microbacterium arabinogalactanolyticum | No | |||||||
| Microbacterium arborescens | Yes | DSM 20754T DSM | ||||||
| Microbacterium arthrosphaerae | No | null | ||||||
| Microbacterium aurantiacum | No | null | ||||||
| Microbacterium aurum | Yes | 55 RLT, DSM 8600T DSM | ||||||
| Microbacterium awajiense | No | null | ||||||
| Microbacterium azadirachtae | No | |||||||
| Microbacterium barkeri | Yes | DSM 20145T DSM | ||||||
| Microbacterium binotii | No | null | ||||||
| Microbacterium chocolatum | No | |||||||
| Microbacterium deminutum | No | null | ||||||
| Microbacterium dextranolyticum | Yes | DSM 8607T DSM | ||||||
| Microbacterium esteraromaticum | No | |||||||
| Microbacterium flavescens | Yes | DSM 20643T DSM | ||||||
| Microbacterium flavum | Yes | 131 RLT | ||||||
| Microbacterium fluvii | No | null | ||||||
| Microbacterium foliorum | Yes | DSM 12966T DSM | ||||||
| Microbacterium ginsengisoli | No | null | ||||||
| Microbacterium ginsengiterrae | No | |||||||
| Microbacterium gubbeenense | No | |||||||
| Microbacterium halophilum | No | null | ||||||
| Microbacterium halotolerans | Yes | DSM 15855T DSM | ||||||
| Microbacterium hatanonis | No | null | ||||||
| Microbacterium hominis | Yes | DSM 12509T DSM | ||||||
| Microbacterium humi | No | null | ||||||
| Microbacterium hydrocarbonoxydans | Yes | DSM 16089T DSM | ||||||
| Microbacterium imperiale | Yes | DSM 20530T DSM | ||||||
| Microbacterium indicum | No | null | ||||||
| Microbacterium insulae | No | |||||||
| Microbacterium invictum | No | null | ||||||
| Microbacterium keratanolyticum | Yes | DSM 8606T DSM | ||||||
| Microbacterium ketosireducens | Yes | DSM 12510T DSM | ||||||
| Microbacterium kitamiense | No | null | ||||||
| Microbacterium koreense | Yes | DSM 18332T DSM | ||||||
| Microbacterium kribbense | No | null | ||||||
| Microbacterium lacticum | Yes | DSM 20172 DSM, DSM 20427T DSM, IMET 10712T HKJ | ||||||
| Microbacterium lacus | No | |||||||
| Microbacterium laevaniformans | Yes | DSM 20140T DSM | ||||||
| Microbacterium lindanitolerans | No | |||||||
| Microbacterium liquefaciens | Yes | DSM 20637 DSM, DSM 20638T DSM, HKI 11374 HKJ | ||||||
| Microbacterium luteolum | Yes | DSM 20143T DSM | ||||||
| Microbacterium luticocti | No | null | ||||||
| Microbacterium marinilacus | No | |||||||
| Microbacterium maritypicum | Yes | DSM 12512T DSM | ||||||
| Microbacterium mitrae | Yes | DSM 24780 DSM | ||||||
| Microbacterium natoriense | Yes | DSM 17277T DSM | ||||||
| Microbacterium oleivorans | Yes | DSM 16091T DSM, 425 RLT | ||||||
| Microbacterium oxydans | Yes | DSM 20578T DSM | ||||||
| Microbacterium paludicola | Yes | DSM 16915T DSM | ||||||
| Microbacterium paraoxydans | No | null | ||||||
| Microbacterium phyllosphaerae | Yes | DSM 13468T DSM | ||||||
| Microbacterium profundi | No | |||||||
| Microbacterium pseudoresistens | No | |||||||
| Microbacterium pumilum | No | |||||||
| Microbacterium pygmaeum | No | null | ||||||
| Microbacterium radiodurans | No | |||||||
| Microbacterium resistens | Yes | DSM 11986T DSM | ||||||
| Microbacterium saperdae | Yes | B245 UFL, IMET 11076T HKJ | ||||||
| Microbacterium schleiferi | Yes | DSM 20606 DSM | ||||||
| Microbacterium sediminicola | No | null | ||||||
| Microbacterium soli | No | null | ||||||
| Microbacterium sp | Yes | DSM 15461 DSM, DSM 20619 DSM, DSM 20620 DSM, DSM 20621 DSM | ||||||
| Microbacterium suwonense | No | |||||||
| Microbacterium terrae | Yes | DSM 8610T DSM | ||||||
| Microbacterium terregens | Yes | DSM 20449T DSM | ||||||
| Microbacterium terricola | No | null | ||||||
| Microbacterium testaceum | Yes | IMET 10361T HKJ, DSM 20526 DSM, DSM 20166T DSM | ||||||
| Microbacterium thalassium | Yes | JCM 12079T DSM, DSM 12511T DSM | ||||||
| Microbacterium trichothecenolyticum | Yes | DSM 8608T DSM | ||||||
| Microbacterium ulmi | Yes | DSM 16931T DSM | ||||||
| Microbacterium xylanilyticum | No | null | ||||||
| Microbacterium yannicii | No | |||||||
| Micrococcus antarcticus | No | |||||||
| Micrococcus endophyticus | No | |||||||
| Micrococcus flavus | Yes | CS 486 1 BRB | ||||||
| Micrococcus lactis | No | null | ||||||
| Micrococcus luteus | Yes | N203 CPB, BK_01140_09 ERL, IMET 11249 HKJ, 59 PIM, P1bue_re2aer USH | ||||||
| Micrococcus lylae | Yes | DSM 20315T LGL | null | |||||
| Micrococcus terreus | Yes | CS 822 1 BRB | ||||||
| Micrococcus yunnanensis | No | null | ||||||
| Micromonospora aurantiaca | Fungus | Yes | DSM 43813T DSM, DSM 44438 DSM | |||||
| Micromonospora carbonacea | Fungus | Yes | DSM 43168T DSM, DSM 43815 DSM | |||||
| Micromonospora chalcea | Fungus | Yes | DSM 43026T DSM, DSM 43116 DSM | |||||
| Micromonospora chersina | Fungus | Yes | DSM 44151T DSM | |||||
| Micromonospora citrea | Fungus | Yes | DSM 43903T DSM | |||||
| Micromonospora coerulea | Fungus | Yes | DSM 43143T DSM | |||||
| Micromonospora echinaurantiaca | Fungus | Yes | DSM 43904T DSM | |||||
| Micromonospora echinofusca | Fungus | Yes | DSM 43913T DSM | |||||
| Micromonospora echinospora | Fungus | Yes | DSM 43036 DSM, DSM 43141 DSM, DSM 43816T DSM | |||||
| Micromonospora inyonensis | Fungus | Yes | DSM 46123T DSM | |||||
| Micromonospora peucetica | Fungus | Yes | DSM 43363T DSM | |||||
| Micromonospora purpureochromogenes | Fungus | Yes | DSM 43814 DSM, DSM 43821T DSM | |||||
| Micromonospora sagamiensis | Fungus | Yes | DSM 43912T DSM | |||||
| Micromonospora sp | Fungus | Yes | B260 UFL | |||||
| Micromonospora viridifaciens | Fungus | Yes | DSM 43909T DSM | |||||
| Microsporum canis | Fungus | 2 | Yes | 30 VML | ||||
| Microsporum_gypseum[ana]# (Arthroderma_gypseum[teleo]) | Fungus | 2 | Yes | RV491_Sep09_B LBK, VML, 26 VML | ||||
| Mobiluncus curtisii | Yes | DSM 2711 DSM | ||||||
| Mobiluncus mulieris | No | null | ||||||
| Mobiluncus sp | Yes | UR01284_2_11 ERL | null | |||||
| Moellerella wisconsensis | Yes | DSM 5076T HAM | ||||||
| Moesziomyces bullatus | Plant pathogen | Fungus | Yes | 993900665 LBK | ||||
| Moorella thermoacetica | Yes | DSM 12797 DSM, DSM 2955 DSM | ||||||
| Moraxella atlantae | Aerobic and facultative anaerobic gram- rods, coccobacilli | 2 | Yes | DSM 6999T DSM | ||||
| Moraxella boevrei | Aerobic and facultative anaerobic gram- rods, coccobacilli | 2 | Yes | DSM 14165T DSM, 11_0000213_005_01 LGL | ||||
| Moraxella bovis | Pink eye in cattle | Aerobic and facultative anaerobic gram- rods, coccobacilli | Cattle | 2 | Yes | DSM 6329 DSM, DSM 6328T DSM, GD56 GDD | ||
| Moraxella bovoculi | Aerobic and facultative anaerobic gram- rods, coccobacilli | Yes | DSM 21142T LGL | |||||
| Moraxella canis | Infections in dog bite related wounds | Aerobic and facultative anaerobic gram- rods, coccobacilli | Dogs | Yes | DSM 18277T DSM, 10036870_101 USH | |||
| Moraxella caprae | Aerobic and facultative anaerobic gram- rods, coccobacilli | Yes | DSM 19149T DSM | |||||
| Moraxella catahrralis | Ear, eye and respiratory infections | Aerobic and facultative anaerobic gram- diplococci | Mucosal surfaces, eye swabs | 2 | Yes | MB_8374_05 THL, DSM 9143T DSM, DSM 11994 DSM, 15 PIM, 14 PIM, 09016322 MLD, ATCC RVA2_98 CHB | ||
| Moraxella cuniculi | Aerobic and facultative anaerobic gram- rods, coccobacilli | No | ||||||
| Moraxella equi | Aerobic and facultative anaerobic gram- rods, coccobacilli | Yes | DSM 18027T DSM | |||||
| Moraxella lacunata | eye and respiratory tract infections | Aerobic and facultative anaerobic gram- rods, coccobacilli | Mucosal surfaces, eye swabs | 2 | Yes | DSM 18052T DSM | ||
| Moraxella lincolnii | Aerobic and facultative anaerobic gram- rods, coccobacilli | 2 | Yes | DSM 19150T DSM, 1I12040543_3e MVD | ||||
| Moraxella nonliquefaciens | Nonpathogenic | Aerobic and facultative anaerobic gram- rods, coccobacilli | Upper respiratory tract | 1 | Yes | DSM 6360 DSM, DSM 6327T DSM, 16 PIM | ||
| Moraxella oblonga | Aerobic and facultative anaerobic gram- rods, coccobacilli | Yes | DSM 17235T DSM | |||||
| Moraxella osloensis | eye and respiratory tract infections | Aerobic and facultative anaerobic gram- rods, coccobacilli | Mucosal surfaces, eye swabs | 2 | Yes | DSM 6998T DSM, VA_13686_02 19 UKE, DSM 6359 DSM, CS 248_4b BRB, 992100145_1 LBK, 76 PIM, 03_7117605 FHB | ||
| Moraxella ovis | Aerobic and facultative anaerobic gram- rods, coccobacilli | Yes | DSM 18075T DSM | |||||
| Moraxella pluranimalium | Aerobic and facultative anaerobic gram- rods, coccobacilli | Yes | DSM 22804T LGL | |||||
| Moraxella porci | Aerobic and facultative anaerobic gram- rods, coccobacilli | No | ||||||
| Moraxella saccharolytica | Aerobic and facultative anaerobic gram- rods, coccobacilli | No | ||||||
| Moraxella sp | Aerobic and facultative anaerobic gram- rods, coccobacilli | Yes | CS 518_7 BRB | |||||
| Morganella morganii | Yes | (E) 21086317_MLD, (PX) 22086121_MLD, 9544_1 CHB, RV_BA_03_A LBK, 451 RLT | ||||||
| Morganella morganii ssp morganii | Yes | 15284_1 CHB, DSM 30117 DSM, DSM 30164T DSM, DSM 30164T HAM | ||||||
| Morganella morganii ssp sibonii | Yes | Mb19277_2 CHB, DSM 14850T HAM | ||||||
| Morganella psychrotolerans | No | null | ||||||
| Mucor circinelloides | Fungus | Yes | RV490_Oct09_04 LBK | |||||
| Mycobacterium abscessus | Aerobic, acid-fast Gram+ | Yes | 04 TWF, E_09_2006 BSI | |||||
| Mycobacterium agri | Aerobic, acid-fast Gram+ | Yes | DSM 44515T DSM | |||||
| Mycobacterium aichiense | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium algericum | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium alvei | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium aromaticivorans | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium arosiense | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium arupense | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium asiaticum | Aerobic, acid-fast Gram+ | Yes | E_05_2007 BSI | |||||
| Mycobacterium aubagnense | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium aurum | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium austroafricanum | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium avium | Aerobic, acid-fast Gram+ | Yes | TB_RV422_4_02 UKE, 08 TWF, 1476 BSI | |||||
| Mycobacterium avium ssp avium | Aerobic, acid-fast Gram+ | Yes | ATCC VAR | |||||
| Mycobacterium avium ssp paratuberculosis | Aerobic, acid-fast Gram+ | Yes | ATCC 19698T VAR | |||||
| Mycobacterium avium ssp silvaticum | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium boenickei | Aerobic, acid-fast Gram+ | Yes | DSM 44677T DSM | |||||
| Mycobacterium bohemicum | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium bolletii | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium botniense | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium bouchedurhonense | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium branderi | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium brisbanense | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium brumae | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium canariasense | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium caprae | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium celatum | Aerobic, acid-fast Gram+ | Yes | DSM 44243T DSM, 3772 BSI, 7268 BSI | |||||
| Mycobacterium chelonae | Aerobic, acid-fast Gram+ | Yes | E_07_2006 BSI | |||||
| Mycobacterium chimaera | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium chitae | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium chlorophenolicum | Aerobic, acid-fast Gram+ | Yes | DSM 43826T DSM | |||||
| Mycobacterium chubuense | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium colombiense | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium conceptionense | Aerobic, acid-fast Gram+ | Yes | DSM 45102T DSM | |||||
| Mycobacterium confluentis | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium conspicuum | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium cookii | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium cosmeticum | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium crocinum | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium diernhoferi | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium doricum | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium duvalii | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium elephantis | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium europaeum | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium fallax | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium farcinogenes | Aerobic, acid-fast Gram+ | Yes | DSM 43637T DSM | |||||
| Mycobacterium flavescens | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium florentinum | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium fluoranthenivorans | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium fortuitum | Aerobic, acid-fast Gram+ | Yes | BlutK LSM, E_09_2007 BSI | |||||
| Mycobacterium frederiksbergense | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium gadium | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium gastri | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium genavense | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium gilvum | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium goodii | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium gordonae | Aerobic, acid-fast Gram+ | Yes | 05 TWF, 0714 BSI, 3090 BSI, 6957 BSI, 6962 BSI, E_11_2007 BSI | |||||
| Mycobacterium haemophilum | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium hassiacum | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium heckeshornense | Aerobic, acid-fast Gram+ | Yes | DSM 44428T DSM | |||||
| Mycobacterium hiberniae | Aerobic, acid-fast Gram+ | Yes | DSM 44241T DSM | |||||
| Mycobacterium hiberniae | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium hodleri | Aerobic, acid-fast Gram+ | Yes | DSM 44183T DSM | |||||
| Mycobacterium holsaticum | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium houstonense | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium immunogenum | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium insubricum | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium interjectum | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium intermedium | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium intracellulare | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium kansasii | Aerobic, acid-fast Gram+ | Yes | 0219 BSI, 03 TWF, 0519 BSI, 3155 BSI, 423_D_II_2007 BSI, TB_RV425_2_03 UKE, VAR | |||||
| Mycobacterium komossense | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium kubicae | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium kumamotonense | Aerobic, acid-fast Gram+ | Yes | DSM 45093T DSM | |||||
| Mycobacterium kyorinense | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium lacus | Aerobic, acid-fast Gram+ | Yes | DSM 44577T DSM | |||||
| Mycobacterium lentiflavum | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium lepraemurium | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium litorale | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium llatzerense | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium madagascariense | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium mageritense | Aerobic, acid-fast Gram+ | Yes | DSM 44476T DSM | |||||
| Mycobacterium malmoense | Aerobic, acid-fast Gram+ | Yes | 0205 BSI, 1023 BSI, 127222 BSI | |||||
| Mycobacterium manitobense | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium mantenii | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium marinum | Aerobic, acid-fast Gram+ | Yes | E_07_2007 BSI | |||||
| Mycobacterium marseillense | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium monacense | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium montefiorense | Aerobic, acid-fast Gram+ | Yes | DSM 44602T DSM | |||||
| Mycobacterium moriokaense | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium mucogenicum | Aerobic, acid-fast Gram+ | Yes | E_08_2007 BSI | |||||
| Mycobacterium murale | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium nebraskense | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium neoaurum | Aerobic, acid-fast Gram+ | Yes | 10w413538 RLH | |||||
| Mycobacterium neworleansense | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium nonchromogenicum | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium noviomagense | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium novocastrense | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium obuense | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium pallens | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium palustre | Aerobic, acid-fast Gram+ | Yes | DSM 44572T DSM | |||||
| Mycobacterium paraffinicum | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium parafortuitum | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium parascrofulaceum | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium paraseoulense | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium parmense | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium peregrinum | Aerobic, acid-fast Gram+ | Yes | 15 PGM, DSM 43271T DSM | |||||
| Mycobacterium phlei | Aerobic, acid-fast Gram+ | Yes | DSM 43239T DSM | |||||
| Mycobacterium phocaicum | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium pinnipedii | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium porcinum | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium poriferae | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium pseudoshottsii | Aerobic, acid-fast Gram+ | Yes | DSM 45108T DSM | |||||
| Mycobacterium psychrotolerans | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium pulveris | Aerobic, acid-fast Gram+ | Yes | DSM 44222T DSM | |||||
| Mycobacterium pyrenivorans | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium rhodesiae | Aerobic, acid-fast Gram+ | Yes | DSM 44223T DSM | |||||
| Mycobacterium riyadhense | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium rufum | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium rutilum | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium salmoniphilum | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium saskatchewanense | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium scrofulaceum | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium senegalense | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium senuense | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium seoulense | Aerobic, acid-fast Gram+ | Yes | DSM 44998T DSM | |||||
| Mycobacterium septicum | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium setense | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium sherrisii | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium shimoidei | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium shinjukuense | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium shottsii | Aerobic, acid-fast Gram+ | Yes | DSM 45125T DSM | |||||
| Mycobacterium simiae | Aerobic, acid-fast Gram+ | Yes | 01 TWF, 423_B_I_2007 BSI | |||||
| Mycobacterium smegmatis | Aerobic, acid-fast Gram+ | Yes | 19 PGM, 19_HI PGM, 3483 BSI, VAR | |||||
| Mycobacterium sphagni | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium stomatepiae | Aerobic, acid-fast Gram+ | No | null | |||||
| Mycobacterium szulgai | Aerobic, acid-fast Gram+ | Yes | DSM 44166T DSM | |||||
| Mycobacterium terrae | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium thermoresistibile | Aerobic, acid-fast Gram+ | Yes | DSM 44167T DSM | |||||
| Mycobacterium timonense | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium tokaiense | Aerobic, acid-fast Gram+ | Yes | DSM 44635T DSM | |||||
| Mycobacterium triplex | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium triviale | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium tusciae | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium vaccae | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium vanbaalenii | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium vulneris | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium wolinskyi | Aerobic, acid-fast Gram+ | No | ||||||
| Mycobacterium xenopi | Aerobic, acid-fast Gram+ | Yes | 02 TWF, 0690 BSI, 0932 BSI, 22 PGM | |||||
| Mycoplasma adleri | No | |||||||
| Mycoplasma agalactiae | No | |||||||
| Mycoplasma agassizii | No | |||||||
| Mycoplasma alkalescens | Yes | 22B10 VLW, NCTC 10135T VLW | ||||||
| Mycoplasma alligatoris | No | |||||||
| Mycoplasma alvi | No | |||||||
| Mycoplasma amphoriforme | No | |||||||
| Mycoplasma anatis | No | |||||||
| Mycoplasma anseris | No | |||||||
| Mycoplasma arginini | Yes | 7SR10 VLW, NCTC 10129T VLW | ||||||
| Mycoplasma arthritidis | No | |||||||
| Mycoplasma auris | No | |||||||
| Mycoplasma bovigenitalium | No | |||||||
| Mycoplasma bovirhinis | Yes | 25B10 VLW | ||||||
| Mycoplasma bovis | Yes | 86B96 VLW, NCTC 10131T VLW | ||||||
| Mycoplasma bovoculi | No | |||||||
| Mycoplasma buccale | No | |||||||
| Mycoplasma buteonis | No | |||||||
| Mycoplasma californicum | No | |||||||
| Mycoplasma canadense | No | |||||||
| Mycoplasma canis | No | NCTC 10146T VLW | ||||||
| Mycoplasma capricolum | No | |||||||
| Mycoplasma capricolum ssp capricolum | No | |||||||
| Mycoplasma capricolum ssp capripneumoniae | No | |||||||
| Mycoplasma caviae | No | |||||||
| Mycoplasma cavipharyngis | No | |||||||
| Mycoplasma citelli | No | |||||||
| Mycoplasma cloacale | No | |||||||
| Mycoplasma coccoides | No | |||||||
| Mycoplasma collis | No | |||||||
| Mycoplasma columbinasale | No | |||||||
| Mycoplasma columbinum | No | |||||||
| Mycoplasma columborale | No | |||||||
| Mycoplasma conjunctivae | No | |||||||
| Mycoplasma corogypsi | No | |||||||
| Mycoplasma cottewii | No | |||||||
| Mycoplasma cricetuli | No | |||||||
| Mycoplasma crocodyli | No | |||||||
| Mycoplasma cynos | No | |||||||
| Mycoplasma dispar | No | |||||||
| Mycoplasma edwardii | No | |||||||
| Mycoplasma elephantis | No | |||||||
| Mycoplasma equigenitalium | No | |||||||
| Mycoplasma equirhinis | No | |||||||
| Mycoplasma falconis | No | |||||||
| Mycoplasma fastidiosum | No | |||||||
| Mycoplasma faucium | No | |||||||
| Mycoplasma felifaucium | No | |||||||
| Mycoplasma feliminutum | No | |||||||
| Mycoplasma felis | No | |||||||
| Mycoplasma fermentans | No | |||||||
| Mycoplasma flocculare | No | |||||||
| Mycoplasma gallinaceum | Yes | 163A08 VLW, NCTC 10183T VLW | ||||||
| Mycoplasma gallinarum | No | |||||||
| Mycoplasma gallisepticum | Yes | 84A10 VLW, NCTC 10151T VLW | ||||||
| Mycoplasma gallopavonis | No | |||||||
| Mycoplasma gateae | No | |||||||
| Mycoplasma genitalium | No | |||||||
| Mycoplasma glycophilum | No | |||||||
| Mycoplasma gypis | No | |||||||
| Mycoplasma haemocanis | No | |||||||
| Mycoplasma haemofelis | No | |||||||
| Mycoplasma haemomuris | No | |||||||
| Mycoplasma hominis | No | |||||||
| Mycoplasma hyopharyngis | No | |||||||
| Mycoplasma hyopneumoniae | No | |||||||
| Mycoplasma hyorhinis | Yes | FLR | ||||||
| Mycoplasma hyosynoviae | No | |||||||
| Mycoplasma iguanae | No | |||||||
| Mycoplasma imitans | No | |||||||
| Mycoplasma indiense | No | |||||||
| Mycoplasma iners | No | |||||||
| Mycoplasma iowae | No | |||||||
| Mycoplasma lagogenitalium | No | |||||||
| Mycoplasma leachii | No | |||||||
| Mycoplasma leonicaptivi | No | |||||||
| Mycoplasma leopharyngis | No | |||||||
| Mycoplasma lipofaciens | No | |||||||
| Mycoplasma lipophilum | No | |||||||
| Mycoplasma maculosum | No | |||||||
| Mycoplasma meleagridis | No | |||||||
| Mycoplasma microti | No | |||||||
| Mycoplasma moatsii | No | |||||||
| Mycoplasma mobile | No | |||||||
| Mycoplasma molare | No | |||||||
| Mycoplasma mucosicanis | No | |||||||
| Mycoplasma muris | No | |||||||
| Mycoplasma mustelae | No | |||||||
| Mycoplasma mycoides | No | |||||||
| Mycoplasma mycoides ssp capri | No | |||||||
| Mycoplasma mycoides ssp mycoides | No | |||||||
| Mycoplasma neophronis | No | |||||||
| Mycoplasma neurolyticum | No | |||||||
| Mycoplasma opalescens | No | |||||||
| Mycoplasma orale | No | |||||||
| Mycoplasma ovipneumoniae | Yes | 12SR02 VLW, NCTC 10115T VLW | ||||||
| Mycoplasma ovis | No | |||||||
| Mycoplasma oxoniensis | No | |||||||
| Mycoplasma penetrans | No | |||||||
| Mycoplasma phocae | No | |||||||
| Mycoplasma phocicerebrale | No | |||||||
| Mycoplasma phocirhinis | No | |||||||
| Mycoplasma pirum | No | |||||||
| Mycoplasma pneumoniae | No | |||||||
| Mycoplasma primatum | No | |||||||
| Mycoplasma pullorum | Yes | 8A10 VLW, NCTC 10187T VLW | ||||||
| Mycoplasma pulmonis | No | |||||||
| Mycoplasma putrefaciens | No | |||||||
| Mycoplasma salivarium | No | |||||||
| Mycoplasma simbae | No | |||||||
| Mycoplasma spermatophilum | No | |||||||
| Mycoplasma spumans | No | |||||||
| Mycoplasma sturni | No | |||||||
| Mycoplasma sualvi | No | |||||||
| Mycoplasma subdolum | No | |||||||
| Mycoplasma suis | No | |||||||
| Mycoplasma synoviae | No | |||||||
| Mycoplasma testudineum | No | |||||||
| Mycoplasma testudinis | No | |||||||
| Mycoplasma verecundum | No | |||||||
| Mycoplasma wenyonii | No | |||||||
| Mycoplasma yeatsii | No | |||||||
| Myroides marinus | No | |||||||
| Myroides odoratimimus | Yes | 090623 LBK, LMG 4029T HAM, UR_01389_09 ERL | ||||||
| Myroides odoratus | Yes | CCM 3296T CCM, CCM 3297 CCM, DSM 2801T HAM | ||||||
| Myroides pelagicus | No | |||||||
| Myroides phaeus | No | |||||||
| Myroides profundi | No | |||||||
| Neisseria animalis | Gram-, aerobic diplococci | No | ||||||
| Neisseria animaloris | Gram-, aerobic diplococci | No | ||||||
| Neisseria bacilliformis | Gram-, aerobic diplococci | Yes | 30 PIM, BK1187 EVM, DSM 23338T DSM | |||||
| Neisseria canis | Gram-, aerobic diplococci | Yes | DSM 18000T DSM | |||||
| Neisseria caviae | Gram-, aerobic diplococci | No | ||||||
| Neisseria cinerea | Gram-, aerobic diplococci | Yes | DSM 4630T DSM | |||||
| Neisseria dentiae | Gram-, aerobic diplococci | No | ||||||
| Neisseria elongata ssp elongata | Gram-, aerobic diplococci | Yes | DSM 17712T DSM | |||||
| Neisseria elongata ssp glycolytica | Gram-, aerobic diplococci | No | ||||||
| Neisseria elongata ssp nitroreducens | Gram-, aerobic diplococci | Yes | DSM 17632T DSM | |||||
| Neisseria flava | Gram-, aerobic diplococci | No | ||||||
| Neisseria flavescens | Gram-, aerobic diplococci | Yes | 533 PGM, C1 2 PGM, DSM 17633T DSM | |||||
| Neisseria gonorrhoeae | Gonorrhea | Gram-, aerobic diplococci | 2 | Yes | ATCC 49226 THL, a04 PGM, ch012 PGM, i6005 ce PGM, ps601 PGM, sp031 Ce PGM, sp034 PGM | |||
| Neisseria iguanae | Gram-, aerobic diplococci | No | ||||||
| Neisseria lactamica | Gram-, aerobic diplococci | Yes | 79 PGM, DSM 4691T DSM, VA33589_09 ERL | |||||
| Neisseria macacae | Gram-, aerobic diplococci | Yes | DSM 19175T DSM | |||||
| Neisseria meningitidis | Meningitis | Gram-, aerobic diplococci | 2 | Yes | 070309 PGM, 1522 PGM, 1541 PGM, 24086406 MLD, 639 PGM, C1 2 PGM, MB_8295_05 THL, Serogroup_A BRL, Serogroup_W135 BRL, Serogroup_X BRL, Serogroup_Y BRL | |||
| Neisseria mucosa | Gram-, aerobic diplococci | Yes | 1591 PGM, DSM 17611T DSM | |||||
| Neisseria perflava | Gram-, aerobic diplococci | Yes | 1621 PGM, DSM 18009T DSM | |||||
| Neisseria polysaccharea | Gram-, aerobic diplococci | Yes | 547 PGM | |||||
| Neisseria shayeganii | Gram-, aerobic diplococci | No | ||||||
| Neisseria sicca | Gram-, aerobic diplococci | Yes | 110 PGM, 70 PGM, DSM 17713T DSM | |||||
| Neisseria sp[2] | Gram-, aerobic diplococci | Yes | 0807M15057901 IBS | |||||
| Neisseria subflava | Gram-, aerobic diplococci | Yes | 1672 PGM, DSM 17610T DSM | |||||
| Neisseria wadsworthii | Gram-, aerobic diplococci | No | ||||||
| Neisseria weaveri | Gram-, aerobic diplococci | Yes | DSM 17688T DSM | |||||
| Neisseria zoodegmatis | Gram-, aerobic diplococci | Yes | 45_A1220 MHH | |||||
| Nesterenkonia lacusekhoensis | No | 402 RLT | ||||||
| Nocardia abscessus | Yes | DSM 44432T DSM | ||||||
| Nocardia acidivorans | No | |||||||
| Nocardia africana | Yes | DSM 44491T DSM | ||||||
| Nocardia alba | No | |||||||
| Nocardia altamirensis | No | |||||||
| Nocardia amamiensis | No | |||||||
| Nocardia anaemiae | Yes | DSM 44821T DSM | ||||||
| Nocardia aobensis | Yes | DSM 44805T DSM | ||||||
| Nocardia araoensis | Yes | DSM 44729T DSM | ||||||
| Nocardia artemisiae | No | |||||||
| Nocardia arthritidis | Yes | DSM 44731T DSM | ||||||
| Nocardia asiatica | Yes | DSM 44668T DSM | ||||||
| Nocardia asteroides | Yes | NO 27 HUA, DSM 43757T DSM, DSM 43258 DSM | ||||||
| Nocardia beijingensis | No | |||||||
| Nocardia blacklockiae | No | |||||||
| Nocardia brasiliensis | Yes | 251 RLT | ||||||
| Nocardia brevicatena | No | |||||||
| Nocardia caishijiensis | No | |||||||
| Nocardia callitridis | No | |||||||
| Nocardia carnea | Yes | B334 UFL | ||||||
| Nocardia cerradoensis | No | |||||||
| Nocardia coeliaca | No | |||||||
| Nocardia concava | Yes | DSM 44804T DSM | ||||||
| Nocardia coubleae | No | |||||||
| Nocardia crassostreae | No | |||||||
| Nocardia cummidelens | No | |||||||
| Nocardia cyriacigeorgica | Yes | DSM 44804T DSM | ||||||
| Nocardia elegans | Yes | DSM 44890T DSM | ||||||
| Nocardia endophytica | No | |||||||
| Nocardia exalbida | Yes | DSM 44883T DSM | ||||||
| Nocardia farcinica | Yes | DSM 43665T DSM | ||||||
| Nocardia flavorosea | No | |||||||
| Nocardia fluminea | No | |||||||
| Nocardia gamkensis | No | |||||||
| Nocardia globerula | No | |||||||
| Nocardia grenadensis | No | |||||||
| Nocardia harenae | No | |||||||
| Nocardia higoensis | Yes | DSM 44732T DSM | ||||||
| Nocardia ignorata | Yes | DSM 44496T DSM | ||||||
| Nocardia inohanensis | No | |||||||
| Nocardia iowensis | No | |||||||
| Nocardia jejuensis | No | |||||||
| Nocardia jiangxiensis | No | |||||||
| Nocardia jinanensis | No | |||||||
| Nocardia kruczakiae | Yes | DSM 44877T DSM | ||||||
| Nocardia lijiangensis | No | |||||||
| Nocardia mexicana | No | |||||||
| Nocardia mikamii | No | |||||||
| Nocardia miyunensis | No | |||||||
| Nocardia neocaledoniensis | No | |||||||
| Nocardia niigatensis | Yes | DSM 44670T DSM | ||||||
| Nocardia ninae | No | |||||||
| Nocardia niwae | No | |||||||
| Nocardia nova | Yes | 10_368938 MVO, DSM 44481T DSM | ||||||
| Nocardia otitidiscaviarum | Yes | DSM 43242T DSM, VA_01844_09 ERL | ||||||
| Nocardia paucivorans | Yes | DSM 44386T DSM | ||||||
| Nocardia pigrifrangens | No | |||||||
| Nocardia pneumoniae | Yes | DSM 44730T DSM | ||||||
| Nocardia polyresistens | No | |||||||
| Nocardia pseudobrasiliensis | No | |||||||
| Nocardia pseudovaccinii | No | |||||||
| Nocardia puris | No | |||||||
| Nocardia rhamnosiphila | No | |||||||
| Nocardia salmonicida | Yes | DSM 40472T DSM | ||||||
| Nocardia seriolae | Yes | DSM 44129T DSM | ||||||
| Nocardia shimofusensis | No | |||||||
| Nocardia sienata | Yes | DSM 44766T DSM | ||||||
| Nocardia soli | No | |||||||
| Nocardia sp | Yes | MB_9090_05 THL, N1064 IBS, N133 IBS, N394 IBS | ||||||
| Nocardia speluncae | No | |||||||
| Nocardia takedensis | No | |||||||
| Nocardia tenerifensis | No | |||||||
| Nocardia terpenica | No | |||||||
| Nocardia testacea | Yes | DSM 44765T DSM | ||||||
| Nocardia thailandica | Yes | DSM 44808T DSM | ||||||
| Nocardia transvalensis | Yes | DSM 43405T DSM | ||||||
| Nocardia uniformis | No | |||||||
| Nocardia vaccinii | No | |||||||
| Nocardia vermiculata | Yes | DSM 44807T DSM | ||||||
| Nocardia veterana | Yes | RVA1_03 SLT | ||||||
| Nocardia vinacea | No | |||||||
| Nocardia wallacei | No | |||||||
| Nocardia xishanensis | No | |||||||
| Nocardia yamanashiensis | Yes | DSM 44669T DSM | ||||||
| Nocardioides aestuarii | No | |||||||
| Nocardioides agariphilus | No | |||||||
| Nocardioides albus | No | |||||||
| Nocardioides alkalitolerans | No | |||||||
| Nocardioides alpinus | No | |||||||
| Nocardioides aquaticus | No | null | ||||||
| Nocardioides aquiterrae | No | null | ||||||
| Nocardioides aromaticivorans | No | null | ||||||
| Nocardioides basaltis | No | null | ||||||
| Nocardioides bigeumensis | No | null | ||||||
| Nocardioides caeni | No | null | ||||||
| Nocardioides caricicola | No | null | ||||||
| Nocardioides daedukensis | No | null | ||||||
| Nocardioides daejeonensis | No | null | ||||||
| Nocardioides daphniae | No | null | ||||||
| Nocardioides dilutus | No | null | ||||||
| Nocardioides dokdonensis | No | null | ||||||
| Nocardioides dubius | No | null | ||||||
| Nocardioides exalbidus | No | null | ||||||
| Nocardioides fonticola | No | null | ||||||
| Nocardioides furvisabuli | No | null | ||||||
| Nocardioides ganghwensis | No | null | ||||||
| Nocardioides ginsengagri | No | null | ||||||
| Nocardioides ginsengisegetis | No | null | ||||||
| Nocardioides ginsengisoli | No | null | ||||||
| Nocardioides halotolerans | No | null | ||||||
| Nocardioides hankookensis | No | null | ||||||
| Nocardioides humi | No | null | ||||||
| Nocardioides hungaricus | No | null | ||||||
| Nocardioides hwasunensis | No | null | ||||||
| Nocardioides insulae | No | null | ||||||
| Nocardioides iriomotensis | No | null | ||||||
| Nocardioides islandensis | No | null | ||||||
| Nocardioides jensenii | Yes | DSM 20641T DSM | ||||||
| Nocardioides kongjuensis | No | null | ||||||
| Nocardioides koreensis | No | null | ||||||
| Nocardioides kribbensis | No | null | ||||||
| Nocardioides lentus | No | null | ||||||
| Nocardioides luteus | No | |||||||
| Nocardioides maradonensis | No | null | ||||||
| Nocardioides marinisabuli | No | null | ||||||
| Nocardioides marinus | No | null | ||||||
| Nocardioides mesophilus | No | null | ||||||
| Nocardioides nitrophenolicus | No | null | ||||||
| Nocardioides oleivorans | No | null | ||||||
| Nocardioides panacihumi | No | null | ||||||
| Nocardioides panacisoli | No | null | ||||||
| Nocardioides plantarum | No | null | ||||||
| Nocardioides pyridinolyticus | No | null | ||||||
| Nocardioides salarius | No | null | ||||||
| Nocardioides sediminis | No | null | ||||||
| Nocardioides simplex | Yes | DSM 20130T DSM | ||||||
| Nocardioides terrae | No | null | ||||||
| Nocardioides terrigena | No | null | ||||||
| Nocardioides tritolerans | No | null | ||||||
| Nocardioides ultimimeridianus | No | null | ||||||
| Nocardiopsis aegyptia | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | ||||||
| Nocardiopsis alba | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | Yes | DSM 43377T DSM | |||||
| Nocardiopsis alkaliphila | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | ||||||
| Nocardiopsis arabia | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | ||||||
| Nocardiopsis arvandica | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | ||||||
| Nocardiopsis baichengensis | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | null | |||||
| Nocardiopsis composta | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | ||||||
| Nocardiopsis dassonvillei | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | null | |||||
| Nocardiopsis dassonvillei ssp. albirubida | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | null | |||||
| Nocardiopsis dassonvillei ssp. dassonvillei | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | null | |||||
| Nocardiopsis exhalans | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | null | |||||
| Nocardiopsis flavescens | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | null | |||||
| Nocardiopsis ganjiahuensis | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | null | |||||
| Nocardiopsis gilva | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | null | |||||
| Nocardiopsis halophila | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | null | |||||
| Nocardiopsis halotolerans | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | null | |||||
| Nocardiopsis kunsanensis | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | null | |||||
| Nocardiopsis listeri | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | null | |||||
| Nocardiopsis litoralis | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | null | |||||
| Nocardiopsis lucentensis | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | null | |||||
| Nocardiopsis metallicus | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | null | |||||
| Nocardiopsis nikkonensis | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | null | |||||
| Nocardiopsis potens | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | null | |||||
| Nocardiopsis prasina | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | null | |||||
| Nocardiopsis quinghaiensis | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | null | |||||
| Nocardiopsis rhodophaea | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | null | |||||
| Nocardiopsis rosea | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | null | |||||
| Nocardiopsis salina | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | null | |||||
| Nocardiopsis sinuspersici | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | null | |||||
| Nocardiopsis synnemataformans | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | null | |||||
| Nocardiopsis trehalosi | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | null | |||||
| Nocardiopsis tropica | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | null | |||||
| Nocardiopsis umidischolae | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | null | |||||
| Nocardiopsis valliformis | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | null | |||||
| Nocardiopsis xinjiangensis | Slow growing, aerobic, Gram+, nonacid-fast, coarsely wrinkled to folded, and white or pink to red in color | No | null | |||||
| Novosphingobium acidiphilum | Gram- bacteria | No | null | |||||
| Novosphingobium aromaticivorans | Gram- bacteria | Yes | DSM 12444T HAM | |||||
| Novosphingobium hassiacum | Gram- bacteria | Yes | DSM 14552T DSM | |||||
| Novosphingobium indicum | Gram- bacteria | No | null | |||||
| Novosphingobium lentum | Gram- bacteria | Yes | DSM 13663T DSM, DSM 13664 DSM | |||||
| Novosphingobium mathurense | Gram- bacteria | No | ||||||
| Novosphingobium naphthalenivorans | Gram- bacteria | Yes | DSM 18518T DSM | |||||
| Novosphingobium nitrogenifigens | Gram- bacteria | Yes | DSM 19370T DSM | |||||
| Novosphingobium panipatense | Gram- bacteria | No | ||||||
| Novosphingobium pentaromativorans | Gram- bacteria | Yes | DSM 17173T DSM | |||||
| Novosphingobium resinovorum | Gram- bacteria | Yes | DSM 10700 HAM, DSM 7478T HAM | |||||
| Novosphingobium rosa | Gram- bacteria | Yes | DSM 7285T DSM, DSM 7305 DSM, DSM 7313 DSM | |||||
| Novosphingobium sediminicola | Gram- bacteria | No | ||||||
| Novosphingobium soli | Gram- bacteria | No | ||||||
| Novosphingobium stygium | Gram- bacteria | Yes | DSM 12445T DSM | |||||
| Novosphingobium subterraneum | Gram- bacteria | Yes | DSM 12447T DSM, DSM 12447T HAM | |||||
| Novosphingobium taihuense | Gram- bacteria | Yes | DSM 17507T DSM | |||||
| Novosphingobium tardaugens | Gram- bacteria | Yes | DSM 16702T DSM | |||||
| Ochrobactrum anthropi | Yes | DSM 20150 DSM, DSM 6882T DSM | ||||||
| Ochrobactrum ciceri | No | |||||||
| Ochrobactrum cytisi | No | |||||||
| Ochrobactrum daejeonense | No | |||||||
| Ochrobactrum gallinifaecis | Yes | DSM 15295T HAM | ||||||
| Ochrobactrum grignonense | Yes | DSM 13338T HAM | ||||||
| Ochrobactrum haematophilum | No | |||||||
| Ochrobactrum intermedium | Yes | LMG 3301T HAM | ||||||
| Ochrobactrum lupini | No | |||||||
| Ochrobactrum oryzae | No | |||||||
| Ochrobactrum pecoris | No | |||||||
| Ochrobactrum pituitosum | No | |||||||
| Ochrobactrum pseudintermedium | No | |||||||
| Ochrobactrum pseudogrignonense | No | |||||||
| Ochrobactrum rhizosphaerae | No | |||||||
| Ochrobactrum sp[3] | Yes | 64 RLT, %5B3%5D 454 RLT | Ochrobactrum sp. SMI 18-06649 SMI | |||||
| Ochrobactrum thiophenivorans | No | |||||||
| Ochrobactrum tritici | Yes | DSM 13340T HAM | ||||||
| Odoribacter denticanis | No | |||||||
| Odoribacter laneus | No | |||||||
| Odoribacter splanchnicus | Yes | DSM 20712T DSM | ||||||
| Oerskovia enterophila | No | |||||||
| Oerskovia jenensis | No | |||||||
| Oerskovia paurometabola | No | |||||||
| Oerskovia turbata | Yes | B258 UFL, IMET 7405T HKJ | ||||||
| Ogatea polymorpha | Yeast | Yes | MY00163 11 ERL | |||||
| Oligella ureolytica | Yes | DSM 18253T DSM | ||||||
| Oligella urethralis | Yes | DSM 7531T DSM, UR_01084a_09 ERL | ||||||
| Olsenella profusa | Yes | P4bue_li7AN USH | ||||||
| Olsenella uli | Yes | P10bue_li9AN USH, P10flue_li9AN USH | ||||||
| Ornithobacterium rhinotracheale | Yes | DSM 15997T DSM, 11_00488_01 VAXM, 11_00507_01 VAXM, GD60 GDD | null | |||||
| Paecilomyces lilacinus | fungus | Yes | 85 VML | |||||
| Paecilomyces variotii | fungus | Yes | RV07_02 21 VML | |||||
| Paenibacillus aestuarii | No | |||||||
| Paenibacillus agarexedens | Yes | DSM 1479 DSM, DSM 1478 DSM, DSM 1477 DSM, DSM 1475 DSM, DSM 1473 DSM, DSM 1327T DSM | ||||||
| Paenibacillus agaridevorans | Yes | DSM 1486 DSM, DSM 1485 DSM, DSM 1484 DSM | ||||||
| Paenibacillus alginolyticus | Yes | DSM 5050T DSM | ||||||
| Paenibacillus algorifonticola | No | |||||||
| Paenibacillus alkaliterrae | No | |||||||
| Paenibacillus alvei | Yes | DSM 5560 DSM, DSM 29T DSM, DSM 5557 DSM | ||||||
| Paenibacillus amylolyticus | Yes | DSM 15211T DSM, DSM 11747T DSM, DSM 11730T DSM | ||||||
| Paenibacillus anaericanus | Yes | DSM 15890T DSM | ||||||
| Paenibacillus antarcticus | No | |||||||
| Paenibacillus apiarius | Yes | DSM 5582 DSM, DSM 5581T DSM | ||||||
| Paenibacillus assamensis | Yes | DSM 18201T DSM | ||||||
| Paenibacillus azoreducens | Yes | DSM 13822T DSM | ||||||
| Paenibacillus azotofixans | No | |||||||
| Paenibacillus barcinonensis | Yes | DSM 15478T DSM | ||||||
| Paenibacillus barengoltzii | Yes | 8N CTL | ||||||
| Paenibacillus borealis | Yes | DSM 13188T DSM | ||||||
| Paenibacillus brasilensis | Yes | DSM 14914T DSM | ||||||
| Paenibacillus camelliae | No | |||||||
| Paenibacillus campinasensis | No | |||||||
| Paenibacillus castaneae | No | |||||||
| Paenibacillus cellulosilyticus | No | |||||||
| Paenibacillus cellulositrophicus | No | |||||||
| Paenibacillus chibensis | Yes | DSM 11731T DSM, DSM 11732 DSM, DSM 329 DSM | ||||||
| Paenibacillus chinjuensis | Yes | DSM 15045T DSM | ||||||
| Paenibacillus chitinolyticus | Yes | DSM 11030T DSM | ||||||
| Paenibacillus chondroitinus | Yes | DSM 5051T DSM | ||||||
| Paenibacillus chungangensis | No | |||||||
| Paenibacillus cineris | Yes | DSM 16945T DSM | ||||||
| Paenibacillus contaminans | No | |||||||
| Paenibacillus cookii | Yes | DSM 16944T DSM | ||||||
| Paenibacillus curdlanolyticus | Yes | DSM 10247T DSM, DSM 10248 DSM | ||||||
| Paenibacillus daejeonensis | Yes | DSM 15491T DSM | ||||||
| Paenibacillus dendritiformis | Yes | DSM 18844T DSM | ||||||
| Paenibacillus durus | Yes | DSM 5976T DSM, DSM 1735 DSM | ||||||
| Paenibacillus edaphicus | Yes | CIP 105814T CIP | ||||||
| Paenibacillus ehimensis | Yes | DSM 11029T DSM | ||||||
| Paenibacillus elgii | No | |||||||
| Paenibacillus favisporus | Yes | DSM 17253T DSM | ||||||
| Paenibacillus filicis | No | |||||||
| Paenibacillus fonticola | No | |||||||
| Paenibacillus forsythiae | No | |||||||
| Paenibacillus gansuensis | Yes | DSM 16968T DSM | ||||||
| Paenibacillus ginsengarvi | No | |||||||
| Paenibacillus ginsengihumi | No | |||||||
| Paenibacillus glacialis | No | |||||||
| Paenibacillus glucanolyticus | Yes | DSM 5162T DSM, DSM 5188 DSM | ||||||
| Paenibacillus glycanilyticus | Yes | DSM 17608T DSM | ||||||
| Paenibacillus graminis | Yes | DSM 15220T DSM | ||||||
| Paenibacillus granivorans | No | |||||||
| Paenibacillus harenae | No | |||||||
| Paenibacillus hodogayensis | No | |||||||
| Paenibacillus humicus | No | |||||||
| Paenibacillus hunanensis | No | |||||||
| Paenibacillus illinoisensis | Yes | DSM 11733T DSM, DSM 11734 DSM | ||||||
| Paenibacillus jamilae | Yes | DSM 13815T DSM | ||||||
| Paenibacillus jilunlii | No | |||||||
| Paenibacillus kobensis | Yes | DSM 10249T DSM, DSM 10250 DSM | ||||||
| Paenibacillus koleovorans | No | |||||||
| Paenibacillus konsidensis | No | |||||||
| Paenibacillus koreensis | No | |||||||
| Paenibacillus kribbensis | No | |||||||
| Paenibacillus lactis | Yes | 9862 CPB, DSM 15596T DSM | ||||||
| Paenibacillus larvae | Yes | DSM 3615 DSM, DSM 7030T DSM | ||||||
| Paenibacillus lautus | Yes | DSM 3035T DSM | ||||||
| Paenibacillus lentimorbus | No | |||||||
| Paenibacillus macerans | Yes | DSM 1574 DSM, DSM 24T DSM, DSM 2892 DSM, DSM 357 DSM, IBS_MS_1 IBS | ||||||
| Paenibacillus macquariensis | Yes | DSM 2T DSM, DSM 489 DSM | ||||||
| Paenibacillus massiliensis | Yes | DSM 16942T DSM | ||||||
| Paenibacillus mendelii | Yes | DSM 19248T DSM | ||||||
| Paenibacillus montaniterrae | No | |||||||
| Paenibacillus motobuensis | Yes | DSM 18200T DSM | ||||||
| Paenibacillus mucilaginosus | No | |||||||
| Paenibacillus nanensis | No | |||||||
| Paenibacillus naphthalenovorans | Yes | DSM 14203T DSM | ||||||
| Paenibacillus nematophilus | Yes | DSM 13559T DSM | ||||||
| Paenibacillus odorifer | Yes | DSM 15391T DSM | ||||||
| Paenibacillus pabuli | Yes | DSM 3036T DSM | ||||||
| Paenibacillus panacisoli | No | |||||||
| Paenibacillus pasadenensis | Yes | DSM 19293T DSM | ||||||
| Paenibacillus pectinilyticus | No | |||||||
| Paenibacillus peoriae | Yes | DSM 8320T DSM | ||||||
| Paenibacillus phoenicis | No | |||||||
| Paenibacillus phyllosphaerae | Yes | DSM 17399T DSM | ||||||
| Paenibacillus pini | No | |||||||
| Paenibacillus pinihumi | No | |||||||
| Paenibacillus pocheonensis | No | |||||||
| Paenibacillus polymyxa | Yes | DSM 292 DSM, DSM 356 DSM, DSM 365 DSM, DSM 742 DSM, DSM 740 DSM, DSM 372 DSM, DSM 36T DSM, DSM 741 DSM | ||||||
| Paenibacillus popilliae | No | |||||||
| Paenibacillus prosopidis | No | |||||||
| Paenibacillus provencensis | No | |||||||
| Paenibacillus pueri | No | |||||||
| Paenibacillus pueri | No | |||||||
| Paenibacillus puldeungensis | No | |||||||
| Paenibacillus purispatii | No | |||||||
| Paenibacillus residui | No | |||||||
| Paenibacillus rhizosphaerae | Yes | DSM 17254T DSM | ||||||
| Paenibacillus rigui | No | |||||||
| Paenibacillus riograndensis | No | |||||||
| Paenibacillus sabinae | Yes | DSM 17841T DSM | ||||||
| Paenibacillus sacheonensis | No | |||||||
| Paenibacillus sanguinis | No | |||||||
| Paenibacillus septentrionalis | No | |||||||
| Paenibacillus sepulcri | No | |||||||
| Paenibacillus siamensis | No | |||||||
| Paenibacillus soli | No | |||||||
| Paenibacillus sonchi | No | |||||||
| Paenibacillus sophorae | No | |||||||
| Paenibacillus sp | Yes | 09 CTC, DSM 1352 DSM, DSM 1354 DSM, DSM 1356 DSM, DSM 1481 DSM, DSM 1482 DSM, DSM 1487 DSM, DSM 34 DSM | ||||||
| Paenibacillus sputi | No | |||||||
| Paenibacillus stellifer | Yes | DSM 14472T DSM | ||||||
| Paenibacillus taichungensis | No | |||||||
| Paenibacillus taiwanensis | Yes | DSM 18679T DSM | ||||||
| Paenibacillus tarimensis | No | |||||||
| Paenibacillus terrae | Yes | DSM 15891 DSM | ||||||
| Paenibacillus terrigena | No | |||||||
| Paenibacillus thailandensis | No | |||||||
| Paenibacillus thiaminolyticus | Yes | DSM 5711 DSM, DSM 5712 DSM, DSM 5713 DSM, DSM 5748 DSM, DSM 7262T DSM | ||||||
| Paenibacillus tianmuensis | No | |||||||
| Paenibacillus timonensis | Yes | DSM 16943T DSM | ||||||
| Paenibacillus tundrae | No | |||||||
| Paenibacillus turicensis | Yes | DSM 14349T DSM | ||||||
| Paenibacillus uliginis | No | |||||||
| Paenibacillus urinalis | Yes | 48 RLT, N235M17_QSA IBS | ||||||
| Paenibacillus validus | Yes | DSM 3037T DSM, DSM 5395 DSM, DSM 6390 DSM, DSM 6544 DSM, DSM 6545 DSM | ||||||
| Paenibacillus wooponensis | No | |||||||
| Paenibacillus woosongensis | No | |||||||
| Paenibacillus wynnii | Yes | DSM 18334T DSM | ||||||
| Paenibacillus xinjiangensis | Yes | DSM 16970T DSM | ||||||
| Paenibacillus xylanexedens | No | |||||||
| Paenibacillus xylanilyticus | Yes | DSM 17255T DSM | ||||||
| Paenibacillus xylanisolvens | No | |||||||
| Paenibacillus zanthoxyli | Yes | DSM 18202T DSM | ||||||
| Pandoraea apista | Yes | DSM 16535T DSM | ||||||
| Pandoraea faecigallinarum | No | |||||||
| Pandoraea norimbergensis | Yes | DSM 11628T HAM | ||||||
| Pandoraea oxalativorans | No | |||||||
| Pandoraea pnomenusa | Yes | DSM 16536T DSM | ||||||
| Pandoraea pulmonicola | Yes | DSM 16583T DSM | ||||||
| Pandoraea sputorum | No | DSM 21091T DSM | ||||||
| Pandoraea sp[2] | Yes | 65 RLT | ||||||
| Pandoraea sp[5] | Yes | 40530_09 ERL | ||||||
| Pandoraea thiooxydans | No | |||||||
| Pandoraea vervacti | No | |||||||
| Pannonibacter phragmitetus | Yes | LMG 5414 HAM, LMG 5430 HAM | ||||||
| Pantoea agglomerans | Yes | CCM 4412 CCM, CCM 4413 CCM, DSM 3493T DSM, DSM 3493T HAM, IMV 8456_2406 PAH, IMV 8606 PAH, CCM 298 CCM, CCM 2406 CCM, BK433 EVM | ||||||
| Pantoea allii | No | |||||||
| Pantoea ananatis | Yes | LMG 2676 PAH, LMG 2665T PAH, DSM 17873T HAM, 42 PIM | ||||||
| Pantoea anthophila | No | |||||||
| Pantoea brenneri | No | |||||||
| Pantoea calida | Yes | DSM 22759T DSM | null | |||||
| Pantoea conspicua | No | |||||||
| Pantoea cypripedii | No | |||||||
| Pantoea deleyi | No | |||||||
| Pantoea dispersa | No | UR1131_1_10 ERL, UR1131_2_10 ERL | ||||||
| Pantoea eucalypti | No | |||||||
| Pantoea eucrina | No | |||||||
| Pantoea gaviniae | Yes | DSM 22758T DSM | null | |||||
| Pantoea septica | Yes | 120806 01 LBK | ||||||
| Pantoea sp | Yes | 110 PIM | ||||||
| Pantoea stewartii ssp indologenes | Yes | LMG 2632T HAM | ||||||
| Pantoea stewartii ssp stewartii | Yes | LMG 2715T PAH, DSM 30176T HAM | ||||||
| Pantoea terrea | Yes | DSM 13701T HAM | Synonym Tatumella terrea | |||||
| Pantoea vagans | No | |||||||
| Parabacteroides distasonis | Yes | 53181 PNU, DSM 20701T DSM, HU35718_3 PNU, HU36220 PNU, HU41816_4 PNU, RV 412_0209_5 LBK, RV_00005_09 ERL, SW26 PNU | ||||||
| Parabacteroides goldsteinii | Yes | BB02 PNU, BB28 PNU, DSM 19448T DSM | ||||||
| Parabacteroides gordonii | No | |||||||
| Parabacteroides johnsonii | Yes | DSM 18315T DSM | ||||||
| Parabacteroides merdae | No | |||||||
| Paracoccus aestuarii | No | |||||||
| Paracoccus alcaliphilus | No | |||||||
| Paracoccus alkenifer | No | |||||||
| Paracoccus aminophilus | No | |||||||
| Paracoccus bengalensis | No | |||||||
| Paracoccus caeni | No | |||||||
| Paracoccus carotinifaciens | No | |||||||
| Paracoccus chinensis | No | |||||||
| Paracoccus denitrificans | Yes | B621 UFL, DSM 6392 DSM | ||||||
| Paracoccus fistulariae | No | |||||||
| Paracoccus haeundaensis | No | |||||||
| Paracoccus halophilus | No | |||||||
| Paracoccus homiensis | No | |||||||
| Paracoccus isoporae | No | |||||||
| Paracoccus kocurii | No | |||||||
| Paracoccus kondratievae | No | |||||||
| Paracoccus koreensis | No | |||||||
| Paracoccus marcusii | No | |||||||
| Paracoccus marinus | No | |||||||
| Paracoccus methylutens | No | |||||||
| Paracoccus niistensis | No | |||||||
| Paracoccus pantotrophus | No | |||||||
| Paracoccus saliphilus | No | |||||||
| Paracoccus seriniphilus | No | |||||||
| Paracoccus solventivorans | No | |||||||
| Paracoccus sphaerophysae | No | |||||||
| Paracoccus stylophorae | No | |||||||
| Paracoccus sulfuroxidans | No | |||||||
| Paracoccus thiocyanatus | No | |||||||
| Paracoccus versutus | Yes | B352 UFL, B515 UFL | ||||||
| Paracoccus yeei | Yes | 08526023 MCU, 09506500 MCU, 09551059 MCU, 992100331 LBK, CS 495_17 BRB | null | |||||
| Paracoccus zeaxanthinifaciens | No | |||||||
| Parascardovia denticolens | Yes | P10flue_re5AN USH | ||||||
| Parengyodontium album | Eye and cutaneous infections. Fungaemia. Endocarditis. | Fungus | Environment, soil | 1 | No | NO | CBS 368.72 HKU CBS 504.83 HKU CBS 570.71 HKU CBS 836.71 HKU CBS 121919 HKU HKU48 HKU IHEM 4198 HKU NRRL 2312 HKU UAMH 1441 HKU UAMH 4512 HKU UAMH 8313 HKU UAMH 9836 HKU UAMH 10043 HKU UAMH 11234 HKU, CBS 368.72 HKU, CBS 504.83 HKU, CBS 570.71 HKU, CBS 836.71 HKU, CBS 121919 HKU, HKU48 HKU, IHEM 4198 HKU, NRRL 2312 HKU, UAMH 1441 HKU, UAMH 4512 HKU, UAMH 8313 HKU, UAMH 9836 HKU, UAMH 10043 HKU, UAMH 11234 HKU | Synonym: Engyodontium album |
| Parvimonas micra | Yes | CCM 3776 CCM, DSM 20468T DSM, P10bue_li10AN USH, P10bue_li2AN USH, P10bue_li5AN USH, P10flue_li2AN USH, P6flue_re1AN USH | null | |||||
| Pasteurella aerogenes | Yes | DSM 10153T DSM | ||||||
| Pasteurella bettyae | Yes | CCUG 26994 CCUG, CCUG 46013 CCUG, CCUG 55370 CCUG, DSM 23000T DSM | null | |||||
| Pasteurella caballi | No | |||||||
| Pasteurella canis | Yes | 26 PIM, SO_02063_09 ERL, VA_01363_3_09 ERL | ||||||
| Pasteurella dagmatis | Yes | VA_01363_1_09 ERLV176 MCRF, V620 MCRF, V673 MCRF, V779 MCRF | null | |||||
| Pasteurella langaaensis | No | |||||||
| Pasteurella lymphangitidis | No | |||||||
| Pasteurella mairii | Yes | DSM 17480T DSM | ||||||
| Pasteurella multocida | Yes | A129_06 FLR, A01_04 FLR, A144_00 FLR, A244_07 FLR, A52_02 FLR, DSM 5281 DSM, DSM 5282 DSM, FI FLR, besSt7 THL | ||||||
| Pasteurella multocida ssp gallicida | No | |||||||
| Pasteurella multocida ssp multocida | Yes | DSM 16031T DSM | ||||||
| Pasteurella multocida ssp septica | No | |||||||
| Pasteurella skyensis | No | |||||||
| Pasteurella stomatis | Yes | V634 MCRF, V665 MCRF | null | |||||
| Pasteurella testudinis | No | |||||||
| Pectobacterium atrosepticum | Yes | DSM 18077T HAM, NB 1526 PAH | ||||||
| Pectobacterium betavasculorum | Yes | DSM 18076T HAM, NB 2122 PAH | ||||||
| Pectobacterium cacticida | Yes | CFBP 3628T MMG | ||||||
| Pectobacterium carnegieana | No | |||||||
| Pectobacterium carotovorum ssp carotovorum | Yes | NB PM2 PAH | ||||||
| Pectobacterium carotovorum ssp odoriferum | Yes | NB 1892 PAH, LMG 5863T HAM | ||||||
| Pectobacterium cypripedii | Yes | DSM 3873T HAM | ||||||
| Pectobacterium rhapontici | No | |||||||
| Pectobacterium wasabiae | Yes | DSM 18074T HAM | ||||||
| Pediococcus acidilactici | Yes | DSM 20238 DSM | ||||||
| Pediococcus argentinicus | No | |||||||
| Pediococcus cellicola | No | |||||||
| Pediococcus claussenii | No | |||||||
| Pediococcus damnosus | No | |||||||
| Pediococcus ethanolidurans | No | |||||||
| Pediococcus inopinatus | No | |||||||
| Pediococcus lolii | No | |||||||
| Pediococcus parvulus | No | |||||||
| Pediococcus pentosaceus | Yes | 091015_01 LBK, 161 RLT, AL908877_BK14924 UKH, DSM 20206 DSM | ||||||
| Pediococcus siamensis | No | |||||||
| Pediococcus stilesii | No | |||||||
| Pelomonas saccharophila | Yes | DSM 654T DSM | ||||||
| Pelomonas sp | Yes | %5B3%5D CS 525_1 BRB | ||||||
| Penicillium camemberti | fungus | Yes | RV490_Oct09_03 LBK | |||||
| Penicillium chrysogenum | fungus | Yes | DSM 895 HED | |||||
| Penicillium sp | fungus | Yes | Isolat S2 HED, Isolat G5 HED | |||||
| Peptococcus niger | Yes | 458 RLT | ||||||
| Peptoniphilus asaccharolyticus | Yes | DSM 20463T DSM | ||||||
| Peptoniphilus gorbachii | Yes | VA22133_12 ERL | null | |||||
| Peptoniphilus harei | Yes | 06_622 IBS, 08_570 IBS, DSM 10020T DSM, DSM 10021 DSM | null | |||||
| Peptoniphilus indolicus | Yes | DSM 20464T DSM, 455 RLT | null | |||||
| Peptoniphilus ivorii | Yes | DSM 10022T DSM | ||||||
| Peptoniphilus lacrimalis | No | |||||||
| Peptoniphilus methioninivorax | No | |||||||
| Peptoniphilus olsenii | No | |||||||
| Peptoniphilus sp | Yes | 110706_K3 LUMC | ||||||
| Peptostreptococcus anaerobius | Yes | DSM 20357 DSM, DSM 2949T DSM, HU28371_2 PNU, HU33518_2 PNU | ||||||
| Peptostreptococcus russellii | No | |||||||
| Peptostreptococcus sp | Yes | 16 RLT | ||||||
| Peptostreptococcus stomatis | No | |||||||
| Phenylobacterium koreense | Yes | 404 RLT | ||||||
| Phoma exigua ssp exigua | fungus | Yes | CBS 431_74 CBS | |||||
| Phoma glomerata | fungus | Yes | DSM 62905 HED | |||||
| Phoma herbarum | fungus | Yes | DSM 63184 HED | |||||
| Photobacterium angustum | No | |||||||
| Photobacterium aphoticum | No | |||||||
| Photobacterium aplysiae | No | |||||||
| Photobacterium aquimaris | No | |||||||
| Photobacterium damselae ssp damselae | Yes | CDC 2227_81 EGS, DSM 7482T HAM | ||||||
| Photobacterium damselae ssp piscicida | Yes | ATCC 29690 EGS, PC846_1 EGS | ||||||
| Photobacterium frigidiphilum | No | |||||||
| Photobacterium gaetbulicola | No | |||||||
| Photobacterium ganghwense | No | |||||||
| Photobacterium halotolerans | No | |||||||
| Photobacterium iliopiscarium | Yes | DSM 9896T HAM | ||||||
| Photobacterium indicum | No | |||||||
| Photobacterium jeanii | No | |||||||
| Photobacterium kishitanii | No | |||||||
| Photobacterium leiognathi | No | |||||||
| Photobacterium lipolyticum | No | |||||||
| Photobacterium lutimaris | No | |||||||
| Photobacterium phosphoreum | No | |||||||
| Photobacterium profundum | No | |||||||
| Photobacterium rosenbergii | No | |||||||
| Photobacterium swingsii | No | |||||||
| Photorhabdus asymbiotica ssp asymbiotica | Yes | DSM 15149T HAM | ||||||
| Photorhabdus asymbiotica ssp australis | Yes | DSM 17609T HAM | ||||||
| Photorhabdus luminescens ssp akhurstii | Yes | DSM 15138T HAM | ||||||
| Photorhabdus luminescens ssp caribbeanensis | No | |||||||
| Photorhabdus luminescens ssp hainanensis | No | |||||||
| Photorhabdus luminescens ssp kayaii | Yes | DSM 15194T HAM | ||||||
| Photorhabdus luminescens ssp klenii | No | |||||||
| Photorhabdus luminescens ssp laumondii | Yes | DSM 15139T HAM | ||||||
| Photorhabdus luminescens ssp luminescens | Yes | DSM 3368T HAM | ||||||
| Photorhabdus luminescens ssp thracensis | No | |||||||
| Photorhabdus temperata ssp cinerea | No | |||||||
| Photorhabdus temperata ssp khanii | No | |||||||
| Photorhabdus temperata ssp stackebrandtii | No | |||||||
| Photorhabdus temperata ssp tasmaniensis | No | |||||||
| Photorhabdus temperata ssp temperata | Yes | DSM 14550T HAM | ||||||
| Photorhabdus temperata ssp thracensis | Yes | DSM 15199T HAM | ||||||
| Phytobacter diazotrophicus | Can cause sepsis | No | SMI 843 SMI | |||||
| Pichia cactophila | Yeast (fungus) | Yes | CBS 620 CBS, CBS 6926T CBS, VA_12214_09 ERL | |||||
| Pichia farinosa | Yeast (fungus) | Yes | DSM 3316T DSM | |||||
| Pichia farinosa | Yeast (fungus) | Yes | DSM 70362 DSM | |||||
| Pichia holstii | Yeast (fungus) | Yes | DSM 70764 DSM | |||||
| Pichia kluyveri | Yes | MY890_09 ERL | ||||||
| Pichia manshurica | Yeast (fungus) | Yes | 03_436 LBK | |||||
| Pichia methylivora | Yeast (fungus) | Yes | DSM 2148T DSM | |||||
| Pichia pseudocactaophila | Yeast | Yes | CBS 6929T CBS | |||||
| Pigmentiphaga daeguensis | Yes | 64 PIM | ||||||
| Pigmentiphaga kullae | No | |||||||
| Pigmentiphaga litoralis | No | |||||||
| Plesiomonas shigelloides | Yes | CCM 1991 CCM, CCM 5860 CCM, CCM 1996 CCM, DSM 8224T HAM, DSM 8224T DSM | ||||||
| Porphyromonas asaccharolytica | Yes | 29_644 IBS | ||||||
| Porphyromonas bennonis | No | |||||||
| Porphyromonas cangingivalis | No | null | ||||||
| Porphyromonas canoris | No | null | ||||||
| Porphyromonas cansulci | No | |||||||
| Porphyromonas catoniae | No | |||||||
| Porphyromonas circumdentaria | No | null | ||||||
| Porphyromonas crevioricanis | No | null | ||||||
| Porphyromonas endodontalis | No | null | ||||||
| Porphyromonas gingivalis | Yes | CCM 3985 CCM, DSM 20709T DSM | ||||||
| Porphyromonas gingivicanis | No | null | ||||||
| Porphyromonas gulae | Yes | DSM 15663T DSM | ||||||
| Porphyromonas levii | Yes | 1347 D337 AHVLA | ||||||
| Porphyromonas macacae | Yes | 110324_35 PNU | null | |||||
| Porphyromonas salivosa | No | |||||||
| Porphyromonas somerae | No | null | ||||||
| Porphyromonas sp | Yes | 110706_K3 LUMC | null | |||||
| Porphyromonas uenonis | No | |||||||
| Pragia fontium | Yes | DSM 5563T HAM | ||||||
| Prevotella albensis | No | null | ||||||
| Prevotella amnii | Yes | 407 RLT | null | |||||
| Prevotella aurantica | No | null | ||||||
| Prevotella baroniae | Yes | HU30410_3 PNU, 110706_A3 LUMC | ||||||
| Prevotella bergensis | Yes | DSM 17361T DSM | ||||||
| Prevotella bivia | Yes | 0807M220682 IBS, DSM 20514T DSM, HU26382 PNU, HU33416_4 PNU, HU33518_4 PNU, HU44067_1 PNU, HU51442_4 PNU | ||||||
| Prevotella brevis | No | null | ||||||
| Prevotella bryantii | No | null | ||||||
| Prevotella buccae | Yes | DSM 20615 DSM_2, HU21568_4 PNU, HU28914_4 PNU, HU29415 PNU, HU47210_2 PNU, IBS_MS_33 IBS | ||||||
| Prevotella buccalis | Yes | DSM 20616T DSM, 110706_K5 LUMC | null | |||||
| Prevotella copri | No | |||||||
| Prevotella corporis | Yes | DSM 18810T DSM | ||||||
| Prevotella dentalis | No | null | ||||||
| Prevotella dentasini | No | |||||||
| Prevotella denticola | Yes | 100617_13 PNU, 110706_H6 LUMC, 110706_H7 LUMC, 110706_H8 LUMC, 110706_I6 LUMC | null | |||||
| Prevotella disiens | Yes | DSM 20516T DSM, HU28371_5 PNU, HU28371_6 PNU | ||||||
| Prevotella enoeca | No | |||||||
| Prevotella falsenii | No | null | ||||||
| Prevotella fusca | No | null | ||||||
| Prevotella heparinolytica | No | null | ||||||
| Prevotella histicola | Yes | P9flue_17_4AN USH | ||||||
| Prevotella intermedia | Yes | DSM 20706T DSM | ||||||
| Prevotella loescheii | No | null | ||||||
| Prevotella maculosa | Yes | DSM 19339T DSM | ||||||
| Prevotella marshii | No | null | ||||||
| Prevotella melaninogenica | Yes | DSM 7089T DSM, IBS_MS_43 IBS, 110706_C3 LUMC, 110706_G7 LUMC | ||||||
| Prevotella micans | No | |||||||
| Prevotella multiformis | No | null | ||||||
| Prevotella multisaccharivorax | Yes | DSM 17128T DSM | ||||||
| Prevotella nanceiensis | Yes | DSM 19126T DSM, IBS_MS_20 IBS | ||||||
| Prevotella nigrescens | Yes | DSM 13386T DSM, P9flue_16_2AN USH | null | |||||
| Prevotella oralis | Yes | DSM 20702T DSM | ||||||
| Prevotella oris | Yes | DSM 18711T DSM, 110706_D3 LUMC | ||||||
| Prevotella oulora | No | |||||||
| Prevotella oulorum | Yes | 110706_K9 LUMC | null | |||||
| Prevotella pallens | Yes | DSM 18710T DSM, VA20903_1_10 ERL, 110706_D4 LUMC, P10bue_re3AN USH | null | |||||
| Prevotella paludivivens | No | |||||||
| Prevotella pleuritidis | No | |||||||
| Prevotella ruminicola | No | null | ||||||
| Prevotella saccharolytica | No | null | ||||||
| Prevotella salivae | Yes | DSM 15606T DSM | ||||||
| Prevotella scopos | No | null | ||||||
| Prevotella shahii | Yes | DSM 15611T DSM | ||||||
| Prevotella sp. | Yes | 176 RLT | ||||||
| Prevotella stercorea | Yes | DSM 18206T DSM | ||||||
| Prevotella tannerae | No | null | ||||||
| Prevotella timonensis | No | |||||||
| Prevotella veroralis | No | null | ||||||
| Prevotella zoogleoformans | No | |||||||
| Propionibacterium acidifaciens | Yes | VA06504_11 ERL | null | |||||
| Propionibacterium acidipropionici | Yes | DSM 20272 DSM, DSM 20273 DSM, DSM 4900T DSM | ||||||
| Propionibacterium acnes | Yes | 0807M23067302 IBS, 0807M14010701 IBS, 113 PIM, 169 RLT, 27_338 IBS, DSM 16379 DSM, RV 412_0209_6_2 LBK, DSM 1897T DSM, 15614 PNU, 19708 PNU, 20218 PNU, 80329 PNU, CS 505_1 BRB, DSM 1897T BRB, P10flue_re7AN USH | ||||||
| Propionibacterium australiense | Yes | DSM 15818T DSM | ||||||
| Propionibacterium avidum | Yes | 91 PIM, DSM 4901T DSM, 339 RLT, VA7144_11 ERL | ||||||
| Propionibacterium cyclohexanicum | Yes | DSM 16859T DSM | ||||||
| Propionibacterium freudenreichii ssp freudenreichii | Yes | DSM 20271T DSM | ||||||
| Propionibacterium freudenreichii ssp shermanii | Yes | DSM 20270 DSM, DSM 4902T DSM | ||||||
| Propionibacterium granulosum | Yes | 122 RLT, DSM 20458 DSM, DSM 20700T DSM, VA_01782_09 ERL | ||||||
| Propionibacterium jensenii | Yes | DSM 20274 DSM, DSM 20278 DSM, DSM 20279 DSM, DSM 20535T DSM | ||||||
| Propionibacterium microaerophilum | Yes | DSM 13435T DSM | ||||||
| Propionibacterium propionicum | Yes | DSM 43307T DSM | ||||||
| Propionibacterium propionicus | No | |||||||
| Propionibacterium sp[2] | Yes | 0424_0694_LM IBS, 46 RLT, VA04653_09 ERL, 53304 PNU, 86157 PNU, VA06196_1_10 ERL, VA06196_2_10 ERL | null | |||||
| Propionibacterium thoenii | Yes | DSM 20276T DSM, DSM 20277 DSM | ||||||
| Propioniferax innocua | Yes | DSM 8251T DSM | ||||||
| Propionimicrobium lymphophilum | Yes | DSM 4903T DSM, UR01284_1_11 ERL | null | |||||
| Proteus hauseri | Facultative anaerobic, Gram- rods, motile | Human intestinal tract, soil, water, plants | Yes | DSM 14437T DSM, DSM 14437T HAM, DSM 30118 DSM | ||||
| Proteus mirabilis | Urinary tract infections | Facultative anaerobic, Gram- rods, motile | Human intestinal tract, soil, water, plants | Yes | 13210_1 CHB, DSM 788 DSM, DSM 50903 DSM, DSM 46227 DSM, DSM 30115 DSM, DSM 18254 DSM, 9482_2 CHB, (PX) 22086112 MLD, RV412_A1_2010_06b LBK | |||
| Proteus myxofaciens | Facultative anaerobic, Gram- rods, motile | Yes | DSM 4482T HAM, DSM 4482T DSM | Synonym Cosenzaea myxofasciens | ||||
| Proteus penneri | Urinary tract infections | Facultative anaerobic, Gram- rods, motile | Human intestinal tract, soil, water, plants | Yes | DSM 4544T DSM | |||
| Proteus vulgaris | Urinary tract infections | Facultative anaerobic, Gram- rods, motile | Human intestinal tract, soil, water, plants | Yes | DSM 46228 DSM, DSM 3265 DSM, DSM 30119 DSM, DSM 13625 DSM, DSM 13387NT HAM, B156 UFL, (PX) 22086129 MLD | |||
| Prototheca wickerhamii | Alga | Yes | w VML | |||||
| Prototheca zopfii | Alga | No | ||||||
| Providencia alcalifaciens | Yes | CCM 5616 CCM, DSM 30120T DSM | ||||||
| Providencia burhodogranariea | No | |||||||
| Providencia heimbachae | Yes | DSM 3591T HAM | ||||||
| Providencia rettgeri | Yes | 20837_2 CHB, CCM 4504 CCM, CCM 5617 CCM, DSM 1131 DSM, DSM 46592 DSM, DSM 46264 DSM, DSM 4542T DSM, CCM 5618 CCM | ||||||
| Providencia rustigianii | Yes | DSM 4541T HAM | ||||||
| Providencia sneebia | No | |||||||
| Providencia stuartii | Yes | DSM 46263 DSM, DSM 4539T HAM, 405 RLT | ||||||
| Providencia vermicola | Yes | DSM 17385T HAM | ||||||
| Pseudacidovorax intermedius | Yes | 464 RLT, 465 RLT, 466 RLT | null | |||||
| Pseudochrobactrum asaccharolyticum | Yes | 6 RLT | ||||||
| Pseudochrobactrum kiredjianiae | No | |||||||
| Pseudochrobactrum lubricantis | No | null | ||||||
| Pseudochrobactrum saccharolyticum | No | |||||||
| Pseudoclavibacter caeni | No | |||||||
| Pseudoclavibacter chungangensis | No | |||||||
| Pseudoclavibacter helvolus | Yes | DSM 20419T DSM | ||||||
| Pseudoclavibacter soli | No | null | ||||||
| Pseudoclavibacter sp | Yes | DSM 17450 DSM, DSM 17449 DSM | ||||||
| Pseudomonas abietaniphila | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | CIP 106708T HAM | |||||
| Pseudomonas aeruginosa | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | 19955_1 CHB, 8147_2 CHB, A07_08_Pudu FLR, DSM 50071T HAM, DSM 1117 DSM, ATCC 27853 THL | ATCC_27853_SMI | ||||
| Pseudomonas agarici | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 11810T HAM | |||||
| Pseudomonas alcaligenes | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 50342T HAM, 4_3_A TUB | |||||
| Pseudomonas alcaliphila | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 17744T LGL | null | ||||
| Pseudomonas amygdali | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas anguilliseptica | pathogenic to fish | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Isolated from water and fish | Yes | DSM 12111T HAM | |||
| Pseudomonas antarctica | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 15318T HAM | |||||
| Pseudomonas argentinensis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas arsenicoxydans | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | null | |||||
| Pseudomonas asplenii | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | LMG 2137T HAM | |||||
| Pseudomonas avellanae | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 11809T DSM | |||||
| Pseudomonas azotifigens | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 17556T LGL | null | ||||
| Pseudomonas azotoformans | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | CIP 106744T HAM | |||||
| Pseudomonas baetica | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | null | |||||
| Pseudomonas balearica | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | B397 UFL, DSM 6083T HAM | |||||
| Pseudomonas bauzanensis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas benzenivorans | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | null | |||||
| Pseudomonas beteli | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas borbori | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | null | |||||
| Pseudomonas boreopolis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | LMG 979T HAM | |||||
| Pseudomonas brassicacearum | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 13227T HAM | |||||
| Pseudomonas brenneri | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | CIP 106646T HAM | |||||
| Pseudomonas caeni | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | null | |||||
| Pseudomonas cannabina | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | null | |||||
| Pseudomonas carboxydohydrogena | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas caricapapayae | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | LMG 2152T HAM | |||||
| Pseudomonas cedrina ssp cedrina | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 105541T HAM | |||||
| Pseudomonas cedrina ssp fulgida | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas chlororaphis ssp aurantiaca | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | CIP 106718T HAM | |||||
| Pseudomonas chlororaphis ssp aureofaciens | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas chlororaphis ssp chlororaphis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 50083T HAM | |||||
| Pseudomonas chlororaphis ssp piscium | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas cichorii | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 50259T HAM | |||||
| Pseudomonas cissicola | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas citronellolis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | 993700254 LBK, DSM 50332T HAM | |||||
| Pseudomonas composti | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas congelans | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 14939T HAM | |||||
| Pseudomonas corrugata | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 7228T HAM | |||||
| Pseudomonas costantinii | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | null | |||||
| Pseudomonas cremoricolorata | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas cuatrocienegasensis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | null | |||||
| Pseudomonas deceptionensis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas delhiensis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas duriflava | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | null | |||||
| Pseudomonas extremaustralis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | null | |||||
| Pseudomonas extremorientalis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 15824T HAM | |||||
| Pseudomonas ficuserectae | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | null | |||||
| Pseudomonas flavescens | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 12071T HAM | |||||
| Pseudomonas flectens | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | null | |||||
| Pseudomonas fluorescens | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | B148 UFL, 06_1151 EGS, DSM 50090T HAM | |||||
| Pseudomonas fluorescens_Group | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | 5 PIM | |||||
| Pseudomonas fragi | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 3456T HAM | |||||
| Pseudomonas frederiksbergensis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 13022T HAM | |||||
| Pseudomonas fulva | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | LMG 11722T HAM, 013_W30 NFI | |||||
| Pseudomonas fuscovaginae | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 7231T HAM | |||||
| Pseudomonas gelidicola | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas geniculata | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas gessardii | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | CIP 105469T HAM | |||||
| Pseudomonas graminis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 11363T HAM | |||||
| Pseudomonas grimontii | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | CIP 106645T HAM | |||||
| Pseudomonas guineae | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | null | |||||
| Pseudomonas halophila | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas hibiscicola | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas hydrocarboxydans | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas indica | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 14015T HAM | |||||
| Pseudomonas japonica | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | null | |||||
| Pseudomonas jessenii | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | CIP 105274T HAM | |||||
| Pseudomonas jinjuensis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | LMG 21316T HAM | |||||
| Pseudomonas kilonensis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 13647T HAM | |||||
| Pseudomonas knackmussii | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas koreensis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | LMG 21318T HAM, 2_2 TUB, 037_W01 NFI | |||||
| Pseudomonas libanensis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | CIP 105460T HAM | |||||
| Pseudomonas lini | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas litoralis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas lundensis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 6252T HAM | |||||
| Pseudomonas lurida | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas lutea | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | LMG 21974T HAM | |||||
| Pseudomonas luteola | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | VA_00501_09 ERL, DSM 6975T HAM, 0807M14008901 IBS | |||||
| Pseudomonas mandelii | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | CIP 105273T HAM | |||||
| Pseudomonas marginalis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 13124T HAM | |||||
| Pseudomonas marincola | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | null | |||||
| Pseudomonas mediterranea | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas meliae | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas mendocina | can cause opportunistic nosocomial (hospital-acquired) infections | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | occurs in water and soil, | Yes | DSM 50017T HAM | |||
| Pseudomonas meridiana | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas migulae | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | CIP 105470T HAM | |||||
| Pseudomonas mohnii | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | null | |||||
| Pseudomonas monteilii | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | 044_W06 NFI, DSM 14164T HAM, 041_W10 NFI, 035_W14 NFI, 025_W23 NFI, 014_W29 NFI | |||||
| Pseudomonas moorei | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas moraviensis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | null | |||||
| Pseudomonas mosselii | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | CIP 105259T HAM | |||||
| Pseudomonas mucidolens | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | LMG 2223T HAM | |||||
| Pseudomonas nitroreducens | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | LMG 20221T HAM, DSM 14399T HAM | |||||
| Pseudomonas oleovorans | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 1045T HAM, B396 UFL, 062_Galv10 NFI | |||||
| Pseudomonas orientalis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | CIP 105540T HAM | |||||
| Pseudomonas oryzihabitans | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 6835T HAM | |||||
| Pseudomonas otitidis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | 18 PIM | |||||
| Pseudomonas pachastrellae | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas palleroniana | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas panacis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas panipatensis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 21819T LGL | null | ||||
| Pseudomonas parafulva | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas pelagia | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | null | |||||
| Pseudomonas peli | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | null | |||||
| Pseudomonas peli | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | null | |||||
| Pseudomonas pertucinogena | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | LMG 1874T HAM | |||||
| Pseudomonas pictorum | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | LMG 981T HAM | |||||
| Pseudomonas plecoglossicida | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 15088T HAM, 042_W03 NFI, 027_W28 NFI, 023_W22 NFI | |||||
| Pseudomonas poae | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 14936T HAM | |||||
| Pseudomonas pohangensis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 17875T DSM | |||||
| Pseudomonas proteolytica | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 15321T HAM | |||||
| Pseudomonas pseudoalcaligenes ssp pseudoalcaligenes | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 50188T HAM | |||||
| Pseudomonas psychrophila | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas psychrotolerans | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas putida | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | B404 UFL, B409 UFL, B402 UFL, B401 UFL, B400 UFL, B342T UFL, B320 UFL, B319 UFL, B318 UFL, B410 UFL, B411 UFL, B524 UFL, B535 Mut_of_B534 UFL, B565 UFL, DSM 291T HAM, DSM 50198 HAM, Mu15117_1 CHB, B317 UFL, B223 UFL, ATCC 49128 THL, 039_W07 NFI, DSM 3226 DSM | null | ||||
| Pseudomonas putida_Group | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | 53 PIM, 7 PIM | |||||
| Pseudomonas reinekei | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas resinovorans | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | LMG 2274T HAM | |||||
| Pseudomonas rhizosphaerae | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | LMG 21640T HAM | |||||
| Pseudomonas rhodesiae | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 14020T HAM | |||||
| Pseudomonas sabulinigri | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas salomonii | null | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | null | ||||
| Pseudomonas saponiphila | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas savastanoi ssp savastanoi | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | LMG 2209T HAM, LMG 5011 HAM | |||||
| Pseudomonas segetis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 18913T DSM | |||||
| Pseudomonas seleniipraecipitans | null | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | null | ||||
| Pseudomonas simiae | null | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | null | ||||
| Pseudomonas sp | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | B627 UFL, B538 UFL, B153 UFL, 107_Neb26 NFI, 057_Galv13 NFI, 01_12605128 MVK, 10w374819 RLH | |||||
| Pseudomonas sp[2] | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | 991600314 LBK | |||||
| Pseudomonas straminea | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | CIP 106745T HAM | |||||
| Pseudomonas stutzeri | rare pathogen | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Ubiquitous in soil and water | Yes | DSM 5190T HAM, 040_W09 NFI, 043_W05 NFI, B367 UFL, BK_02099_09 ERL, DSM 13592 HAM, V319 MCRF | |||
| Pseudomonas synxantha | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 18928T DSM | |||||
| Pseudomonas syringae ssp syringae | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 6693 HAM, LMG 1247T HAM | |||||
| Pseudomonas taeanensis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas taetrolens | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | LMG 2336T HAM | |||||
| Pseudomonas taiwanensis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas thermotolerans | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 14292T HAM | |||||
| Pseudomonas thivervalensis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 13194T HAM | |||||
| Pseudomonas tolaasii | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | LMG 2342T HAM | |||||
| Pseudomonas toyotomiensis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas tremae | null | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | null | ||||
| Pseudomonas trivialis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 14937T HAM | |||||
| Pseudomonas tuomuerensis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas umsongensis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | LMG 21317T HAM | |||||
| Pseudomonas vancouverensis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | CIP 106707T HAM | |||||
| Pseudomonas veronii | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 11331T HAM, B561 UFL, B560 UFL, B559 UFL | |||||
| Pseudomonas viridiflava | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 11124T HAM | |||||
| Pseudomonas vranovensis | null | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | null | ||||
| Pseudomonas xanthomarina | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | Yes | DSM 18231T LGL | |||||
| Pseudomonas xiamenensis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudomonas xinjiangensis | Gram-, rods, motile, aerobic, non spore forming, postive catalase and oxidase | No | ||||||
| Pseudonocardia hydrocarbonoxydans | Yes | DSM 43281T DSM | ||||||
| Pseudoxanthomonas broegbernensis | No | |||||||
| Pseudoxanthomonas daejeonensis | No | |||||||
| Pseudoxanthomonas dokdonensis | No | |||||||
| Pseudoxanthomonas indica | No | |||||||
| Pseudoxanthomonas japonensis | No | |||||||
| Pseudoxanthomonas kalamensis | No | |||||||
| Pseudoxanthomonas kaohsiungensis | Yes | DSM 17583T DSM | ||||||
| Pseudoxanthomonas koreensis | No | |||||||
| Pseudoxanthomonas mexicana | No | |||||||
| Pseudoxanthomonas sacheonensis | No | |||||||
| Pseudoxanthomonas spadix | Yes | DSM 18855T DSM | ||||||
| Pseudoxanthomonas suwonensis | No | |||||||
| Pseudoxanthomonas taiwanensis | No | |||||||
| Pseudoxanthomonas yeongjuensis | No | |||||||
| Pseudozyma aphidis | Fungus | Yes | DSM 70725T DSM | |||||
| Psychrobacillus insolitus | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 5T DSM | ||||
| Psychrobacillus psychrodurans | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 11713T DSM | ||||
| Psychrobacillus psychrotolerans | Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores | 1 | Yes | DSM 11706T DSM | ||||
| Psychrobacter lutiphocae | Yes | UGV 4123 UGV, UGV 4125 UGV | ||||||
| Psychrobacter sp | Yes | LB_101250a_09 ERL | ||||||
| Pullulanibacillus naganoensis | Yes | DSM 10191T DSM | ||||||
| Rahnella aquatilis | Yes | CCM 4086 CCM, DSM 30078 HAM, DSM 4594T HAM | ||||||
| Ralstonia insidiosa | Nonpathogenic | 1 | Yes | 029_W16 NFI, 116 RLT, 39x PGM | ||||
| Ralstonia mannitolilytica | Yes | DSM 17512T DSM | ||||||
| Ralstonia pickettii | Infections in patiens that undergo trachotomy | Soil samples | 1 | Yes | 21323_1 CHB | |||
| Ralstonia solanacearum | Nonpathogenic | Plants | 1 | No | ||||
| Ralstonia sp | Yes | B484 UFL | ||||||
| Ralstonia syzygii | Yes | DSM 7385T DSM | ||||||
| Raoultella electrica | Gram-, oxidase neg, aerobic, non motile and facultative anaerobic rods. | 2 | No | |||||
| Raoultella ornithinolytica | Gram-, oxidase neg, aerobic, non motile and facultative anaerobic rods. | Plants, soil and water samples | 2 | Yes | DSM 7464T HAM, MB_18887 CHB, MHNC_19_3 ERL, MHNC_46_4 ERL, MHNC_54_1 ERL, MHNC_57_7 ERL, UR00558_09 ERL, UR01120_09 ERL, VA00837_09 ERL, VA10895_09 ERL | null | ||
| Raoultella planticola | Gram-, oxidase neg, aerobic, non motile and facultative anaerobic rods. | Plants, soil and water samples | 2 | Yes | DSM 3069T DSM, DSM 4617 DSM, MHNC_28_1 ERL, MHNC_SB2787 ERL, VA04253_09 ERL, VA3440_3_09 ERL | |||
| Raoultella terrigena | Gram-, oxidase neg, aerobic, non motile and facultative anaerobic rods. | Plants, soil and water samples | 2 | Yes | DSM 2687T DSM, DSM 7331 DSM, DSM 7333 DSM, VA12423_10 ERL, VA5551_09 ERL | |||
| Rathayibacter caricis | Gram+, aerobic coryneform bacteria | No | ||||||
| Rathayibacter festucae | Gram+, aerobic coryneform bacteria | No | ||||||
| Rathayibacter iranicus | Gram+, aerobic coryneform bacteria | No | ||||||
| Rathayibacter rathayi | Gram+, aerobic coryneform bacteria | Yes | DSM 7485T DSM | |||||
| Rathayibacter toxicus | Gram+, aerobic coryneform bacteria | No | ||||||
| Rathayibacter tritici | null | Gram+, aerobic coryneform bacteria | null | No | null | |||
| Rheinheimera aquatica | Gram-,rods | Environmental samples | 1 | No | ||||
| Rheinheimera aquimaris | Gram-,rods | Environmental samples | 1 | No | ||||
| Rheinheimera baltica | Gram-,rods | Environmental samples | 1 | No | ||||
| Rheinheimera chironomi | Gram-,rods | Environmental samples | 1 | No | ||||
| Rheinheimera nanhaiensis | Gram-,rods | Environmental samples | 1 | No | ||||
| Rheinheimera pacifica | Gram-,rods | Environmental samples | 1 | No | ||||
| Rheinheimera perlucida | Gram-,rods | Environmental samples | 1 | No | ||||
| Rheinheimera soli | Gram-,rods | Environmental samples | 1 | Yes | 3_1 TUB | |||
| Rheinheimera tangshanensis | Gram-,rods | Environmental samples | 1 | No | ||||
| Rheinheimera texasensis | Gram-,rods | Environmental samples | 1 | No | ||||
| Rhizobium aggregatum | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium alamii | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium alkalisoli | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium borbori | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium cellulosilyticum | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium daejeonense | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium endophyticum | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium etli | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium fabae | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium galegae | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium gallicum | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium giardinii | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium hainanense | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium herbae | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium huautlense | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium indigoferae | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium larrymoorei | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium leguminosarum | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium leucaenae | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium loessense | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium lupini | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium lusitanum | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium mesosinicum | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium miluonense | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium mongolense | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium multihospitium | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium oryzae | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium phaseoli | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium pisi | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium pseudoryzae | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium pusense | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium radiobacter | Gram-, aerobic rods. | Soil, plant samples | 1 | Yes | 994000124 LBK, B177 UFL, B178 UFL, B336 UFL, DSM 30147T HAM, BK1223 EVM, B165 UFL, B166 UFL, B167 UFL, B168_TR_101 UFL, B170 UFL | |||
| Rhizobium rosettiformans | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium rubi | Gram-, aerobic rods. | Soil, plant samples | 1 | Yes | DSM 6772T HAM | |||
| Rhizobium selenitireducens | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium skierniewicense | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium soli | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium sullae | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium taibaishanense | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium tibeticum | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium tropici | Gram-, aerobic rods. | Soil, plant samples | 1 | Yes | DSM 11418T HAM | |||
| Rhizobium tubonense | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium undicola | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium vallis | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium vignae | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium vitis | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizobium yanglingense | Gram-, aerobic rods. | Soil, plant samples | 1 | No | ||||
| Rhizopus microsporus | Fungus | Yes | RVA_08I VML | |||||
| Rhodobacter aestuarii | Gram- | Yes | DSM 19945T DSM | |||||
| Rhodobacter azotoformans | Gram- | No | ||||||
| Rhodobacter blasticus | Gram- | No | ||||||
| Rhodobacter capsulatus | Gram- | No | ||||||
| Rhodobacter johrii | Gram- | No | ||||||
| Rhodobacter maris | Gram- | No | ||||||
| Rhodobacter megalophilus | Gram- | No | ||||||
| Rhodobacter ovatus | Gram- | No | ||||||
| Rhodobacter sphaeroides | Gram- | No | ||||||
| Rhodobacter veldkampii | Gram- | Yes | DSM 11550T DSM | |||||
| Rhodobacter vinaykumarii | Gram- | No | ||||||
| Rhodobacter viridis | Gram- | No | ||||||
| Rhodococcus aetherivorans | Yes | DSM 44752T DSM | ||||||
| Rhodococcus artemisiae | null | null | null | No | null | |||
| Rhodococcus baikonurensis | Yes | DSM 44587T DSM | ||||||
| Rhodococcus coprophilus | Yes | B301 UFL, DSM 43347T DSM | ||||||
| Rhodococcus corynebacterioides | Yes | DSM 20151T DSM | ||||||
| Rhodococcus equi | Yes | DSM 1990 DSM, 559 LAL, DSM 20295 DSM, DSM 20307T DSM, DSM 43950 DSM, DSM 46064 DSM, DSM 46101 DSM, Cory_35 IBS | ||||||
| Rhodococcus erythropolis | Yes | B254 UFL, B303 UFL, DSM 12789 DSM, DSM 16550 DSM, DSM 20665 DSM, DSM 311 DSM, DSM 43296 DSM, DSM 43188 DSM, DSM 43060 DSM, DSM 43933 DSM, DSM 44235 DSM, DSM 44522 DSM, DSM 44308 DSM, DSM 44534 DSM, DSM 7337 DSM, IMET 7462T HKJ | ||||||
| Rhodococcus fascians | Yes | B304 UFL, DSM 43987 DSM, B520 UFL, DSM 20131 DSM, DSM 20669T DSM, DSM 43985 DSM, DSM 44858 DSM, DSM 46103 DSM | ||||||
| Rhodococcus globerulus | Yes | DSM 43953 DSM, B312 UFL, DSM 43954T DSM, DSM 44310 DSM | ||||||
| Rhodococcus gordoniae | Yes | DSM 44690 DSM | ||||||
| Rhodococcus imtechensis | Yes | DSM 45091T DSM | ||||||
| Rhodococcus jialingiae | No | |||||||
| Rhodococcus jostii | Yes | DSM 44719T DSM | ||||||
| Rhodococcus koreensis | Yes | DSM 44498T DSM | ||||||
| Rhodococcus kroppenstedtii | Yes | DSM 44908T DSM | ||||||
| Rhodococcus kunmingensis | Yes | DSM 45001T DSM | ||||||
| Rhodococcus kyotonensis | No | |||||||
| Rhodococcus maanshanensis | Yes | DSM 44675T DSM | ||||||
| Rhodococcus marinonascens | Yes | DSM 43752T DSM | ||||||
| Rhodococcus opacus | Yes | B408_FI UFL, DSM 43252 DSM, DSM 43251 DSM, DSM 43250 DSM, DSM 43205T DSM | ||||||
| Rhodococcus percolatus | Yes | DSM 44240T DSM | ||||||
| Rhodococcus phenolicus | Yes | DSM 44812T DSM | ||||||
| Rhodococcus pyridinivorans | Yes | DSM 20415 DSM, DSM 44555T DSM | ||||||
| Rhodococcus qingshengii | No | |||||||
| Rhodococcus rhodnii | Yes | B305 UFL, DSM 43336T DSM, DSM 43337 DSM, DSM 43959 DSM, DSM 43960 DSM | ||||||
| Rhodococcus rhodochrous | Yes | B257 UFL, B306 UFL, B375 UFL, DSM 363 DSM, DSM 43198 DSM, DSM 43234 DSM, DSM 6427 DSM, DSM 6263 DSM, DSM 46045 DSM, DSM 46023 DSM, DSM 43986 DSM, DSM 43274 DSM | ||||||
| Rhodococcus ruber | Yes | DSM 43335 DSM, DSM 43560 DSM, DSM 43563 DSM, DSM 44190 DSM, DSM 44495 DSM, DSM 44539 DSM, DSM 46646 DSM, DSM 44540 DSM, DSM 44541 DSM, DSM 44755 DSM, DSM 44758 DSM, DSM 46008 DSM, DSM 7512 DSM, DSM 6264 DSM, HKI 7477 HKJ | ||||||
| Rhodococcus triatomae | Yes | DSM 44892T DSM, DSM 44893 DSM | ||||||
| Rhodococcus wratislaviensis | Yes | DSM 44107T DSM | ||||||
| Rhodococcus yunnanensis | Yes | DSM 44837T DSM | ||||||
| Rhodococcus zopfii | Yes | DSM 44108T DSM, DSM 44189 DSM | ||||||
| Rhodospiridium sp | Yeast (Fungus) | Yes | CS 135_1 BRB | |||||
| Rhodotorula acheniorum | Yeast (Fungus) | soil, water, air samples | Yes | DSM 70584 DSM | ||||
| Rhodotorula bacarum | Yeast (Fungus) | soil, water, air samples | Yes | DSM 70854T DSM | ||||
| Rhodotorula bogoriensis | Yeast (Fungus) | soil, water, air samples | Yes | DSM 70872T DSM | ||||
| Rhodotorula glutinis | Yeast (Fungus) | soil, water, air samples | Yes | DSM 70398 DSM, DSM 10134 DSM | ||||
| Rhodotorula minuta | Yeast (Fungus) | soil, water, air samples | Yes | DSM 4043 DSM, DSM 3016 DSM, DSM 14202 DSM | ||||
| Rhodotorula mucilaginosa | Yeast (Fungus) | soil, water, air samples | Yes | DSM 18184 DSM, DSM 70403 DSM, DSM 70404 DSM, DSM 70825 DSM, WSYC 342T VML, VML, MY00555_08 ERL | ||||
| Rhodotorula pustula | Yeast (Fungus) | soil, water, air samples | Yes | DSM 70865T DSM | ||||
| Rickettsia aeschlimannii | Rash of maculopapules | Gram-, non-motile, obligate intracellular parasites, non-sporeforming, highly pleiomorfic. | 2 | No | ||||
| Rickettsia africae | African tick-bite fever | Gram-, non-motile, obligate intracellular parasites, non-sporeforming, highly pleiomorfic. | 2 | No | ||||
| Rickettsia asiatica | Gram-, non-motile, obligate intracellular parasites, non-sporeforming, highly pleiomorfic. | 2 | No | |||||
| Rickettsia australis | Queensland tick-typhus | Gram-, non-motile, obligate intracellular parasites, non-sporeforming, highly pleiomorfic. | 2 | No | null | |||
| Rickettsia bellii | Gram-, non-motile, obligate intracellular parasites, non-sporeforming, highly pleiomorfic. | 2 | No | |||||
| Rickettsia felis | Flea born spotted fever in cats | Gram-, non-motile, obligate intracellular parasites, non-sporeforming, highly pleiomorfic. | 2 | No | ||||
| Rickettsia heilongjiangensis | Gram-, non-motile, obligate intracellular parasites, non-sporeforming, highly pleiomorfic. | 2 | No | |||||
| Rickettsia helvetica | Spotted fever and meningitis | Gram-, non-motile, obligate intracellular parasites, non-sporeforming, highly pleiomorfic. | 2 | No | ||||
| Rickettsia honei | Flinders island spotted fever | Gram-, non-motile, obligate intracellular parasites, non-sporeforming, highly pleiomorfic. | 2 | No | ||||
| Rickettsia hoogstraalii | Gram-, non-motile, obligate intracellular parasites, non-sporeforming, highly pleiomorfic. | 2 | No | |||||
| Rickettsia japonica | Japanese spotted fever | Gram-, non-motile, obligate intracellular parasites, non-sporeforming, highly pleiomorfic. | 2 | No | ||||
| Rickettsia massiliae | Gram-, non-motile, obligate intracellular parasites, non-sporeforming, highly pleiomorfic. | 2 | No | |||||
| Rickettsia parkeri | American tick-bite fever | Gram-, non-motile, obligate intracellular parasites, non-sporeforming, highly pleiomorfic. | 2 | No | ||||
| Rickettsia peacockii | Gram-, non-motile, obligate intracellular parasites, non-sporeforming, highly pleiomorfic. | 2 | No | |||||
| Rickettsia raoultii | Gram-, non-motile, obligate intracellular parasites, non-sporeforming, highly pleiomorfic. | 2 | No | |||||
| Rickettsia rhipicephali | Gram-, non-motile, obligate intracellular parasites, non-sporeforming, highly pleiomorfic. | 2 | No | |||||
| Rickettsia sibirica | North Asian tick-typhus | Gram-, non-motile, obligate intracellular parasites, non-sporeforming, highly pleiomorfic. | 2 | No | ||||
| Rickettsia slovaca | Gram-, non-motile, obligate intracellular parasites, non-sporeforming, highly pleiomorfic. | 2 | No | |||||
| Rickettsia tamurae | Gram-, non-motile, obligate intracellular parasites, non-sporeforming, highly pleiomorfic. | 2 | No | |||||
| Riemerella anatipestifer | Yes | DSM 15868T DSM, 11_00491_06 VAXM, GD47 GDD, GD48 GDD, GD49 GDD | ||||||
| Riemerella columbina | Yes | DSM 16469T DSM | ||||||
| Rodentibacter pneumotropicus | Yes | DSM 21403T DSM, A 73_11 FLR | LDJ6208-12, LDJ507-12 | |||||
| Roseomonas aerilata | null | null | null | No | null | |||
| Roseomonas aestuarii | null | null | No | null | ||||
| Roseomonas aquatica | No | |||||||
| Roseomonas cervicalis | No | |||||||
| Roseomonas frigidaquae | null | null | null | No | null | |||
| Roseomonas gilardii | null | null | No | null | ||||
| Roseomonas gilardii ssp gilardii | null | null | null | No | null | |||
| Roseomonas gilardii ssp rosea | null | null | null | No | null | |||
| Roseomonas lacus | null | null | null | No | null | |||
| Roseomonas ludipueritiae | null | null | No | null | ||||
| Roseomonas mucosa | Yes | AL905209_BK14662 UKH | ||||||
| Roseomonas pecuniae | null | null | null | No | null | |||
| Roseomonas rosea | null | null | null | No | null | |||
| Roseomonas stagni | null | null | No | null | ||||
| Roseomonas terrae | No | |||||||
| Roseomonas vinacea | null | null | null | No | null | |||
| Rothia aeria | Yes | Cory_26 IBS | ||||||
| Rothia aeria | Yes | DSM 14556T DSM | ||||||
| Rothia amarae | Yes | DSM 15839T DSM, IBS_MS_31 IBS | ||||||
| Rothia dentocariosa | Yes | B16575_bh8 IBS, DSM 43762T DSM, G18709 IBS, G6496_ch28 IBS, RV_BA1_032010_D LBK | ||||||
| Rothia mucilaginosa | Yes | DSM 20445 DSM, DSM 20446 DSM, DSM 20746T DSM | ||||||
| Rothia mucilaginosa | Yes | BK2995_09 ERL | ||||||
| Rothia nasimurium | Yes | DSM 15694T DSM, 10037052_102 USH, 10036873_108 USH, 10036870_103 USH | ||||||
| Rothia terrae | No | |||||||
| Rubrivivax benzoatilyticus | No | |||||||
| Rubrivivax gelatinosus | Yes | DSMZ 1709T PAH | ||||||
| Ruminococcus albus | No | |||||||
| Ruminococcus bromii | null | null | No | null | ||||
| Ruminococcus callidus | null | null | null | No | null | |||
| Ruminococcus champanellensis | No | |||||||
| Ruminococcus faecis | null | null | null | No | null | |||
| Ruminococcus flavefaciens | null | null | No | null | ||||
| Ruminococcus gauvreauii | null | null | null | No | null | |||
| Ruminococcus gnavus | Yes | 1 RLT, VA20002_11 ERL | ||||||
| Ruminococcus lactaris | null | null | null | No | null | |||
| Ruminococcus obeum | null | null | null | No | null | |||
| Ruminococcus torques | null | null | No | null | ||||
| Rummeliibacillus pycnus | Yes | DSM 15030T DSM | ||||||
| Rummeliibacillus stabekisii | null | null | No | null | ||||
| Saccharomyces cervisae | Yeast | 1 | Yes | 991400574 LBK, BJ2168 BRL, DTY3 BRL, INVSC1 BRL, ISOLAT LGL MUENCHEN, KONTROLLSTAMM HUMANMEDIZIN VML, WS LLH | ||||
| Saccharopolyspora antimicrobica | null | null | null | No | null | |||
| Saccharopolyspora cebuensis | null | null | null | No | null | |||
| Saccharopolyspora erythraea | Yes | HKI 184 HKJ | ||||||
| Saccharopolyspora flava | null | null | null | No | null | |||
| Saccharopolyspora gloriosae | null | null | null | No | null | |||
| Saccharopolyspora gregorii | null | null | null | No | null | |||
| Saccharopolyspora halophila | No | |||||||
| Saccharopolyspora hirsuta ssp hirsuta | Yes | HKI 9709 HKJ | ||||||
| Saccharopolyspora hirsuta ssp kobensis | null | null | null | No | null | |||
| Saccharopolyspora hordei | null | null | null | No | null | |||
| Saccharopolyspora jiangxiensis | null | null | null | No | null | |||
| Saccharopolyspora phatthalungensis | No | |||||||
| Saccharopolyspora qijiaojingensis | null | null | null | No | null | |||
| Saccharopolyspora rectivirgula | Hypersensitivity pneumonitis | Anaerobe gram+ rods (clusters form "hyphae-like" structures) | Decaying organic matter, soil samples, mucosal surfaces | 2 | No | null | ||
| Saccharopolyspora rosea | null | null | null | No | null | |||
| Saccharopolyspora shandongensis | null | null | null | No | null | |||
| Saccharopolyspora spinosa | null | null | null | No | null | |||
| Saccharopolyspora spinosporotrichia | null | null | null | No | null | |||
| Saccharopolyspora taberi | null | null | null | No | null | |||
| Saccharopolyspora thermophila | null | null | null | No | null | |||
| Saccharopolyspora tripterygii | null | null | null | No | null | |||
| Saccharothrix mutabilis ssp capreolus | Fungus | Yes | HKI 264 HKJ | |||||
| Saccharothrix mutabilis ssp mutabilis | Fungus | Yes | HKI 9771 HKJ | |||||
| Saccharothrix syringae | Fungus | No | ||||||
| Salimicrobium album | null | null | null | No | null | |||
| Salimicrobium flavidum | No | |||||||
| Salimicrobium halophilum | Yes | DSM 4771T DSM | ||||||
| Salimicrobium luteum | No | |||||||
| Salimicrobium salexigens | null | null | null | No | null | |||
| Salinivibrio costicola | null | null | null | No | null | |||
| Salinivibrio costicola ssp alcaliphilus | No | |||||||
| Salinivibrio costicola ssp costicola | Yes | DSM 11403T HAM | ||||||
| Salinivibrio costicola ssp vallismortis | null | null | null | No | null | |||
| Salinivibrio proteolyticus | null | null | null | No | null | |||
| Salinivibrio sharmensis | null | null | null | No | null | |||
| Salinivibrio siamensis | No | |||||||
| Salmonella parathyphi | Yes | 9322, 5709, 10412 | ||||||
| Salmonella sp (bongori) | Yes | DSM 13772T HAM | ||||||
| Salmonella sp (choleraesuis) | Yes | 08 LAL | ||||||
| Salmonella sp (enterica st Anatum) | Yes | 11 LAL | ||||||
| Salmonella sp (enterica st Arizonae) | Yes | DSM 9386T HAM, LBK | ||||||
| Salmonella sp (enterica st Diarizonae) | Yes | DSM 14847T HAM | ||||||
| Salmonella sp (enterica st Dublin) | Yes | Sa05_188 VAB | ||||||
| Salmonella sp (enterica st Enterica) | Yes | DSM 17058T HAM | ||||||
| Salmonella sp (enterica st Gallinarum) | Yes | FLR | ||||||
| Salmonella sp (enterica st Hadar) | Yes | Sa05_506 VAB | ||||||
| Salmonella sp (enterica st Houtenae) | Yes | DSM 9221T HAM | ||||||
| Salmonella sp (enterica st Indica) | Yes | DSM 14848T HAM | ||||||
| Salmonella sp (enterica st Salamae) | Yes | DSM 9220T HAM | ||||||
| Salmonella sp (enterica st Stanley) | Yes | 15 LAL | ||||||
| Salmonella sp (enteritidis) | Yes | 25089078 (PX) MLD | ||||||
| Salmonella sp (typhimurium) | Yes | 12 LAL | ||||||
| Samsonia erythrinae | Yes | DSM 16730T HAM | ||||||
| Saprochaere clavata | Yeast | Yes | CBS 970 87 CBS, CBS 425 71 CBS, CBS 969 87 CBS, CBS 489 88 CBS | |||||
| Saprochaere suaveolens | Yeast | Yes | CBS 610 85 CBS | |||||
| Sarocladium strictum | Yeast | Yes | RV1 MY 1 11 ERL, MY681 10 ERL | |||||
| Scedosporium aurantiacum | fungus | Yes | 149 VML | |||||
| Schizophyllum commune | fungus | Yes | RV07_02 23 VML | |||||
| Schizosaccharomyces pombe | fungus | Yes | FY261 BRL | |||||
| Scopulariopsis_brevicaulis[ana]# (Microascus_brevicaulis[teleo]) | fungus | Yes | RV C VML, 131 RVE_06 VML | |||||
| Selenomonas infelix | Yes | P3bue_re8AN USH, P3flue_re8AN USH | null | |||||
| Selenomonas sputigena | Yes | P3bue_li7AN USH | null | |||||
| Serratia entomophila | Yes | DSM 12358T DSM | ||||||
| Serratia ficaria | Yes | DSM 4569T DSM | ||||||
| Serratia fonticola | Yes | DSM 4576T DSM, DSM 9663 DSM, DSM 9664 DSM | ||||||
| Serratia glossinae | No | |||||||
| Serratia grimesii | Yes | DSM 30063T DSM | ||||||
| Serratia liquefaciens | Yes | DSM 30064 DSM, CCM 2716 CCM, DSM 30065 DSM, DSM 30066 DSM, DSM 30067 DSM, DSM 30068 DSM, DSM 30069 DSM, DSM 30125 DSM, DSM 4487T DSM | ||||||
| Serratia marcescens | Yes | (PX) 24086109 MLD, 13103_1CHB, DSM 12481 DSM, DSM 12483 DSM, DSM 12485 DSM, DSM 30122 DSM | ||||||
| Serratia marcescens ssp marcescens | Yes | DSM 30121T DSM | ||||||
| Serratia marcescens ssp sakuensis | Yes | CIP 107489T HAM | ||||||
| Serratia nematodiphila | No | |||||||
| Serratia odorifera | Yes | DSM 4582T DSM | ||||||
| Serratia plymuthica | Yes | DSM 4540T DSM, DSM 30127 DSM, DSM 8572 DSM, DSM 49 DSM, DSM 8571 DSM | ||||||
| Serratia proteamaculans | Yes | DSM 4543T DSM | ||||||
| Serratia quinivorans | Yes | DSM 4597T DSM | ||||||
| Serratia rubidaea | Yes | CCM 3412 CCM, CCM 3413 CCM, CCM 4684 CCM, DSM 4480T HAM, DSM 46275 DSM | ||||||
| Serratia symbiotica | No | |||||||
| Serratia ureilytica | Yes | DSM 16952T DSM | ||||||
| Shewanella abyssi | No | |||||||
| Shewanella algae | Gamma Proteobacteria rod-shaped Gram-negative marine bacterium | marine water | Yes | DSM 9167T HAM | ||||
| Shewanella algidipiscicola | No | |||||||
| Shewanella amazonensis | No | |||||||
| Shewanella aquimarina | No | |||||||
| Shewanella arctica | No | |||||||
| Shewanella atlantica | No | |||||||
| Shewanella baltica | Yes | DSM 9439T HAM | ||||||
| Shewanella basaltis | No | |||||||
| Shewanella benthica | null | null | null | No | null | |||
| Shewanella canadensis | No | |||||||
| Shewanella chilikensis | No | |||||||
| Shewanella colwelliana | No | |||||||
| Shewanella corallii | null | null | null | No | null | |||
| Shewanella decolorationis | No | |||||||
| Shewanella denitrificans | No | |||||||
| Shewanella donghaensis | No | |||||||
| Shewanella fidelis | Yes | LMG 20552T HAM | ||||||
| Shewanella fodinae | No | |||||||
| Shewanella frigidimarina | Yes | DSM 12253T HAM | ||||||
| Shewanella gaetbuli | null | null | null | No | null | |||
| Shewanella gelidimarina | No | |||||||
| Shewanella glacialipiscicola | No | |||||||
| Shewanella hafniensis | No | |||||||
| Shewanella halifaxensis | No | |||||||
| Shewanella haliotis | null | null | null | No | null | |||
| Shewanella hanedai | No | |||||||
| Shewanella indica | No | |||||||
| Shewanella irciniae | No | |||||||
| Shewanella japonica | null | null | null | No | null | |||
| Shewanella kaireitica | No | |||||||
| Shewanella livingstonensis | No | |||||||
| Shewanella loihica | null | null | null | No | null | |||
| Shewanella marina | No | |||||||
| Shewanella marinintestina | No | |||||||
| Shewanella marisflavi | No | |||||||
| Shewanella morhuae | null | null | null | No | null | |||
| Shewanella olleyana | No | |||||||
| Shewanella oneidensis | No | |||||||
| Shewanella pacifica | No | |||||||
| Shewanella pealeana | null | null | null | No | null | |||
| Shewanella piezotolerans | No | |||||||
| Shewanella pneumatophori | No | |||||||
| Shewanella profunda | Yes | DSM 15900T HAM | ||||||
| Shewanella psychrophila | null | null | null | No | null | |||
| Shewanella putrefaciens | Yes | CCM 2803 CCM, CCM 2601 CCM, CCM 2600 CCM, 05_1570B EGS | ||||||
| Shewanella sairae | No | |||||||
| Shewanella schlegeliana | No | |||||||
| Shewanella sediminis | No | |||||||
| Shewanella spongiae | No | |||||||
| Shewanella surugensis | No | |||||||
| Shewanella vesiculosa | No | |||||||
| Shewanella violacea | null | null | null | No | null | |||
| Shewanella waksmanii | null | null | null | No | null | |||
| Shewanella woodyi | No | |||||||
| Shewanella xiamenensis | null | null | null | No | null | |||
| Shigella boydii | 2 | No | ||||||
| Shigella flexneri | 2 | No | ||||||
| Shigella sonnei | null | null | null | 2 | No | null | ||
| Shimwellia blattae | Yes | DSM 4481T HAM | ||||||
| Shimwellia flava | null | null | null | No | null | |||
| Shimwellia pseudoproteus | null | null | null | No | null | |||
| Shimwellia soli | null | null | null | No | null | |||
| Sinomonas albida | No | |||||||
| Sinomonas atrocyanea | Yes | DSM 20127T DSM, HKI 10432 HKJ | ||||||
| Sinomonas echigonensis | No | |||||||
| Slackia equolifaciens | No | |||||||
| Slackia exigua | Yes | 14 RLT, DSM 15923T DSM, VA_20157_09 ERL, VA01714_10 ERL, P8bue_re3AN USH | ||||||
| Slackia faecicanis | No | |||||||
| Slackia heliotrinireducens | Yes | DSM 20476T DSM | ||||||
| Slackia isoflavoniconvertens | No | |||||||
| Slackia piriformis | No | |||||||
| Sodalis glossinidius | Yes | DSM 16929T HAM | ||||||
| Solibacillus silvestris | Yes | DSM 12223T DSM | ||||||
| Solobacterium moorei | Yes | 110324_64 PNU, 110721 MLB | null | |||||
| Sphingobacterium anhuiense | No | |||||||
| Sphingobacterium antarcticum | null | null | null | No | null | |||
| Sphingobacterium bambusae | No | |||||||
| Sphingobacterium canadense | No | |||||||
| Sphingobacterium composti | No | |||||||
| Sphingobacterium daejeonense | No | |||||||
| Sphingobacterium faecium | Yes | DSM 11690T HAM | ||||||
| Sphingobacterium kitahiroshimense | No | |||||||
| Sphingobacterium mizutaii | Yes | DSM 11724T HAM | ||||||
| Sphingobacterium multivorum | Yes | DSM 11691T HAM | ||||||
| Sphingobacterium shayense | No | |||||||
| Sphingobacterium siyangense | No | |||||||
| Sphingobacterium spiritivorum | Yes | DSM 11722T HAM, VA14846_09 ERL | ||||||
| Sphingobacterium thalpophilum | Yes | DSM 11723T HAM | ||||||
| Sphingobacterium wenxiniae | No | |||||||
| Sphingobium abikonense | No | |||||||
| Sphingobium amiense | Yes | DSM 16289T DSM | ||||||
| Sphingobium aromaticiconvertens | Yes | DSM 12677T DSM | ||||||
| Sphingobium chinhatense | No | |||||||
| Sphingobium chlorophenolicum | Yes | DSM 8671 DSM, DSM 7098T HAM, DSM 7098T DSM, DSM 6824 DSM | ||||||
| Sphingobium chungbukense | No | |||||||
| Sphingobium cloacae | Yes | DSM 14926T HAM | ||||||
| Sphingobium faniae | No | |||||||
| Sphingobium francense | No | |||||||
| Sphingobium fuliginis | Yes | DSM 18781T DSM | ||||||
| Sphingobium herbicidovorans | Yes | DSM 11019T HAM, B533 UFL | ||||||
| Sphingobium indicum | Yes | DSM 16412T DSM | ||||||
| Sphingobium japonicum | Yes | DSM 16413T DSM | ||||||
| Sphingobium jiangsuense | No | |||||||
| Sphingobium lactosutens | No | |||||||
| Sphingobium lucknowense | No | |||||||
| Sphingobium olei | Yes | DSM 18999T DSM | ||||||
| Sphingobium qiguonii | No | |||||||
| Sphingobium quisquiliarum | No | |||||||
| Sphingobium rhizovicinum | No | |||||||
| Sphingobium scionense | No | |||||||
| Sphingobium ummariense | No | |||||||
| Sphingobium vermicomposti | No | |||||||
| Sphingobium vulgare | No | |||||||
| Sphingobium wenxiniae | No | |||||||
| Sphingobium xenophagum | Yes | DSM 6383T HAM | ||||||
| Sphingomonas abaci | Yes | DSM 15867T DSM | ||||||
| Sphingomonas adhaesiva | Yes | DSM 7418T HAM | ||||||
| Sphingomonas aerolata | Yes | DSM 14746T DSM | ||||||
| Sphingomonas aestuarii | No | |||||||
| Sphingomonas aquatilis | Yes | DSM 15581T HAM, DSM 15581T DSM | ||||||
| Sphingomonas asaccharolytica | Yes | DSM 10564T DSM | ||||||
| Sphingomonas astaxanthinifaciens | No | |||||||
| Sphingomonas aurantiaca | Yes | DSM 14749 DSM, DSM 14748T HAM, DSM 14748T DSM | ||||||
| Sphingomonas azotifigens | Yes | DSM 18530T DSM | ||||||
| Sphingomonas changbaiensis | No | |||||||
| Sphingomonas desiccabilis | Yes | DSM 16792T DSM | ||||||
| Sphingomonas dokdonensis | No | |||||||
| Sphingomonas echinoides | No | |||||||
| Sphingomonas faeni | Yes | DSM 14747T HAM | ||||||
| Sphingomonas fennica | No | |||||||
| Sphingomonas ginsenosidimutans | No | |||||||
| Sphingomonas glacialis | No | |||||||
| Sphingomonas haloaromaticamans | Yes | DSM 13477T DSM | ||||||
| Sphingomonas hankookensis | No | |||||||
| Sphingomonas histidinilytica | No | |||||||
| Sphingomonas insulae | No | |||||||
| Sphingomonas japonica | No | |||||||
| Sphingomonas jaspsi | No | |||||||
| Sphingomonas jejuensis | No | |||||||
| Sphingomonas jinjuensis | No | |||||||
| Sphingomonas kaistensis | No | |||||||
| Sphingomonas koreensis | Yes | DSM 15582T HAM, CS 509_4 BRB | null | |||||
| Sphingomonas mali | Yes | DSM 10565T DSM | ||||||
| Sphingomonas melonis | Yes | DSM 14444T DSM | ||||||
| Sphingomonas molluscorum | Yes | DSM 19588T DSM | ||||||
| Sphingomonas mucosissima | Yes | DSM 17494T DSM | ||||||
| Sphingomonas oligophenolica | No | |||||||
| Sphingomonas oryziterrae | No | |||||||
| Sphingomonas panni | Yes | DSM 15761T DSM | ||||||
| Sphingomonas parapaucimobilis | Yes | DSM 7463T DSM | ||||||
| Sphingomonas paucimobilis | Yes | DSM 30198 DSM, DSM 1098T HAM, B341 UFL | ||||||
| Sphingomonas phyllosphaerae | Yes | DSM 17258T DSM | ||||||
| Sphingomonas pituitosa | Yes | DSM 13101T HAM | ||||||
| Sphingomonas polyaromaticivorans | No | |||||||
| Sphingomonas pruni | Yes | DSM 10566T DSM | ||||||
| Sphingomonas pseudosanguinis | Yes | DSM 19512T DSM | ||||||
| Sphingomonas roseiflava | No | |||||||
| Sphingomonas rubra | No | |||||||
| Sphingomonas sanguinis | Yes | DSM 13885T DSM, 008_Neb20 NFI | ||||||
| Sphingomonas sanxanigenens | No | |||||||
| Sphingomonas soli | Yes | DSM 18313T DSM | ||||||
| Sphingomonas sp | Yes | DSM 7458 DSM, DSM 7356 DSM, DSM 19371 DSM, DSM 12247 DSM, B616 UFL, B605 UFL, B556 UFL, B399 UFL | ||||||
| Sphingomonas suberifaciens | No | |||||||
| Sphingomonas trueperi | Yes | DSM 7225T HAM, DSM 7225T DSM | ||||||
| Sphingomonas wittichii | Yes | DSM 6014T HAM, DSM 6014T DSM | ||||||
| Sphingomonas xinjiangensis | No | |||||||
| Sphingomonas yabuuchiae | Yes | DSM 14562T HAM, DSM 14562T DSM | ||||||
| Sphingomonas yunnanensis | Yes | DSM 17000T DSM | ||||||
| Sphingopyxis alaskensis | No | |||||||
| Sphingopyxis baekryungensis | Yes | DSM 16222T DSM |