Bruker database





Organism Clinical feature Classification Likely found in BSL Present in Biotyper library Biotyper MSPs New MSPs Comments
Bacillus acidiceler Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores environment, dust 1 No
Bacillus acidicola Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Moss 1 Yes DSM 14745T DSM
Bacillus acidiproducens Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Soil 1 No
Bacillus aeolius Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Water from culcanic origin 1 No
Bacillus aerius Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Air 1 No
Bacillus aerophilus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores air 1 No
Bacillus agaradhaerens Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores soil 1 Yes DSM 8721T DSM
Bacillus aidingensis Gram+, rod shaped, produce endospores sediment in salt lake 1 No
Bacillus akibai Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Soda lake 1 Yes CIP 109018T CIP
Bacillus alcalophilus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Alkaline water 1 Yes B446 UFL, DSM 485T DSM
Bacillus algicola Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Brown algea 1 Yes CIP 107850T CIP
Bacillus alkalinitrilicus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Soil 1 No
Bacillus alkalisediminis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Soil 1 No
Bacillus alkalitelluris Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Soil 1 No
Bacillus altitudinis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Air 1 Yes CS 542 4 BRB, CS 809 1 BRB
Bacillus alveayuensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Deep sea sediment 1 Yes CIP 108784T CIP
Bacillus amyloliquefaciens Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Soil 1 Yes CIP 103265T CIP
Bacillus amyloliquefaciens ssp amyloliquefasciens Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Soil 1 No
Bacillus amyloliquefaciens ssp plantarum Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Soil 1 No
Bacillus aquimaris Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Seawater 1 Yes DSM 16205T DSM
Bacillus arsenicus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Soil 1 Yes 4_2 TUB, DSM 15822T DSM
Bacillus aryabhattai Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Soil 1 No
Bacillus asahii Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Soil 1 Yes CIP 108638T CIP
Bacillus atrophaeus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Water 1 Yes DSM 2277 DSM,DSM 5551 DSM, DSM 675 DSM, DSM 7264T DSM
Bacillus aurantiacus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores soda lake 1 No
Bacillus azotoformans Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Soil 1 Yes DSM 1046T DSM
Bacillus badius Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Feces, dust, water, food, antacids 1 Yes DSM 23T DSM
Bacillus barbaricus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores soil 1 Yes DSM 14730T DSM
Bacillus bataviensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores soil 1 Yes DSM 15601T DSM
Bacillus beijingensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores soil 1 No
Bacillus benzoevorans Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores soil 1 Yes DSM 5391T DSM
Bacillus berkeleyi Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores soil 1 No
Bacillus beveridgei Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores soil 1 No
Bacillus bogoriensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores soil 1 No
Bacillus boroniphilus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores soil 1 No
Bacillus butanolivorans Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores soil 1 No
Bacillus canaveralius Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores soil 1 No
Bacillus carboniphilus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores soil 1 Yes DSM 17613T DSM
Bacillus cecembensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores soil 1 No
Bacillus cellulosilyticus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores soil 1 Yes DSM 2522T DSM
Bacillus cereus Gastroenteritis, ocular infections, bacteremia Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Blood samples, feces and urine samples, optical swab 2 Yes 994000168 LBK, 4080 LBK, DSM 31T DSM ATCC 4342 SMI, ATCC 10702 SMI, ATCC 10987 SMI, F2085-98 SMI, F4810-72 SMI, MHI 1305 SMI, F837-76 SMI, IH41385 SMI, MHI 13 SMI, NVH 0597-98 SMI, NVH 0597-99 SMI, NVH 1518-99 SMI, RIVM BC67 SMI, SJ1 SMI, WSBC 10286 SMI, WSBC 10483 SMI, BC6901 SMI, SMI environmental isolate SMI
Bacillus chagannorensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Soda lake 1 Yes CIP 109712T CIP
Bacillus chungangensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Sea water 1 No
Bacillus cibi Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Seafood 1 Yes DSM 16189T DSM
Bacillus circulans Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes CS 220_1a BRB, DSM 11T DSM
Bacillus clarkii Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 8720T DSM
Bacillus clausii Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 8716T DSM
Bacillus coagulans Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Soil, acid foods 1 Yes B321 UFL, DSM 1T DSM
Bacillus coahuilensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus cohnii Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 6307T DSM
Bacillus daliensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus decisifrondis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus decolorationis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 14890T DSM
Bacillus drentensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 15600T DSM
Bacillus endophyticus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 13796T DSM
Bacillus endoradicis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus farraginis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 16013T DSM
Bacillus fastidiosus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Soil 1 Yes DSM 91T DSM
Bacillus firmus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Soil 1 Yes DSM 12T DSM
Bacillus flexus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 1320T DSM, 100331_30 USP SMI M14-03 SMI
Bacillus foraminis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus fordii Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 16014T DSM
Bacillus fortis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 16012T DSM
Bacillus fumarioli Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus funiculus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 15141T DSM
Bacillus galactosidilyticus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 15595T DSM
Bacillus galliciensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus gelatini Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus gibsonii Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes CS 231_11b BRB, DSM 8722T DSM
Bacillus ginsenghumi Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus ginsengi Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus graminis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus halmapalus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 8723T DSM
Bacillus halochares Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus halodurans Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 497T DSM
Bacillus hemicellulosilyticus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 16731T DSM
Bacillus hemicentroti Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus herbersteinensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus horikoshii produces tetrodotoxin (TTX) Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores liver of fish isolated from soil 1 Yes DSM 8719T DSM alkaliphilic and alkalitolerant, aerobic endospore-forming bacteria.
Bacillus horneckiae Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Yes DSM 23495T DSM
Bacillus horti Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 12751T DSM
Bacillus humi Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 16318T DSM
Bacillus hwajinpoensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 16206T DSM
Bacillus idriensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes CIP 109494T CIP
Bacillus indicus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 15820T DSM
Bacillus infantis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes CIP 109493T CIP
Bacillus infernus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus iranensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus isabeliae Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus isronensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus jeotgali Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 18226T DSM
Bacillus kochii Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus koreensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 16467T DSM
Bacillus kribbensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus krulwichiae Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 18225T DSM
Bacillus lehensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus lentus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Soil 1 Yes DSM 9T DSM
Bacillus licheniformis cause of abortion in cattle, sheep and pigs, and also isolated from suppurative lesions of horses and cattle Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores soil, plants 1 Yes 992000432 LBK, CS 54_1 BRB, DSM 13T DSM
Bacillus litoralis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 16303T DSM
Bacillus localis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus luciferensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 18845T DSM
Bacillus luteolus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus macauensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 17262T DSM
Bacillus macayae Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus mannanilyticus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 16130T DSM
Bacillus marisflavi Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 16204T DSM
Bacillus marmarensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus massiliensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No 1I12072947_1e MVD
Bacillus megaterium Non-pathogenic Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Soil 1 Yes DSM 32T DSM
Bacillus methanolicus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus methylotrophicus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus mojavensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 9205T DSM
Bacillus muralis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 16288T DSM
Bacillus murimartini Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus mycoides Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores soil 1 Yes DSM 2048T DSM
Bacillus nanhaiensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus nanhaiisediminis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus nealsonii Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 15077T DSM
Bacillus neizhouensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus niabensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus niacini Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 2923T DSM
Bacillus novalis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 15603T DSM
Bacillus oceanisediminis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus odysseyi Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 18869T DSM
Bacillus okhensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes CIP 109247T CIP
Bacillus okuhidensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 13666T DSM
Bacillus oleronius Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 9356T DSM
Bacillus oshimensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes CIP 108751T CIP
Bacillus panaciterrae Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus patagoniensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 16117T DSM
Bacillus persepolensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus plakortidis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus pocheonensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus polygoni Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus pseudalcaliphilus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 8725T DSM
Bacillus pseudofirmus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes CS 123_1a1 BRB, DSM 8715T DSM, DSM 2516 DSM, DSM 9718 DSM, DSM 9746 DSM, CS 629_2b BRB
Bacillus pseudomycoides Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 12442T DSM
Bacillus psychrosaccharolyticus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 6T DSM
Bacillus pumilus can cause food poisoning Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 13835 DSM, DSM 1794 DSM, DSM 27T DSM, DSM 354 DSM, IAM 12050 PAH, IAM 12469 PAH
Bacillus purgationiresistens Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus qingdaonensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus rigui Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus ruris Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 17057T DSM
Bacillus safensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes CIP 109412 CIP
Bacillus salarius Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 16461T DSM
Bacillus saliphilus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus selenatarsenstis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus selenitireducens Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus seohaeanensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 16464T DSM
Bacillus shackletonii Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 18868T DSM
Bacillus siamensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus simplex Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes CS 206_1aI BRB, DSM 1321T DSM
Bacillus siralis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 13140T DSM
Bacillus smithii Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes CIP 103790T CIP, DSM 4216T DSM
Bacillus soli Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 15604T DSM
Bacillus solisalsi Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus sonorensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 13779T DSM
Bacillus sp Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes LB_101250b_09 ERL
Bacillus sporothermodurans Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 10599T DSM
Bacillus stratosphericus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores Air 1 No
Bacillus subterraneus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 13966T DSM
Bacillus subtilis can cause food poisoning Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes 107_W_7_QSA IBS, DSM 5552 DSM, DSM 5611 DSM
Bacillus subtilis ssp inaquosorum Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus subtilis ssp spizizenii Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 15029T DSM
Bacillus subtilis ssp subtilis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 10T DSM, DSM 5660 DSM
Bacillus taenensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus taquilensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus thermantarcticus Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus thermoamylovorans Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes 10w413986 RLH
Bacillus thermocloacae Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus thermolactis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus thioparans Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes CIP 109765T CIP
Bacillus thuringiensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 2046T DSM 4CC1 SMI, ATCC 10792 SMI, ATCC 35646 SMI, BGSC 4AJ1 SMI, BGSC 4AW1 SMI, BGSC 4BD1 SMI, BGSC 4Y1 SMI, CIP 105674 SMI
Bacillus trypoxylicola Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus tusciae Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacillus vallismortis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 11031T DSM
Bacillus vedderi Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 9768T DSM
Bacillus vietnamensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 18898T DSM
Bacillus vireti Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 15602T DSM
Bacillus wakoensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 2521T DSM
Bacillus weihenstephanensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 Yes DSM 11821T DSM DSM 11821 SMI
Bacillus xiaoxiensis Gram+, rod shaped obligate aerobes or facultative naaerobes, produce oval endospores 1 No
Bacteroides acidifaciens Gram-, bacilli, anaerobe but aerotolerant 2 No
Bacteroides barnesiae Gram-, bacilli, anaerobe but aerotolerant 2 No
Bacteroides caccae Gram-, bacilli, anaerobe but aerotolerant feces 2 Yes 103 PIM, DSM 19024T DSM
Bacteroides cellulosilyticus Gram-, bacilli, anaerobe but aerotolerant 2 Yes CCUG 56000 CCUG, DSM 14838T DSM
Bacteroides cellulosolvens Gram-, bacilli, anaerobe but aerotolerant water 1 No
Bacteroides chinchillae Gram-, bacilli, anaerobe but aerotolerant 2 No
Bacteroides clarus Gram-, bacilli, anaerobe but aerotolerant 2 No
Bacteroides coagulans Infections following gastrointestinal surgery Gram-, bacilli, anaerobe but aerotolerant Gastrointestinal tract 2 Yes DSM 20705T DSM
Bacteroides coprocola Gram-, bacilli, anaerobe but aerotolerant Feces 2 Yes DSM 17136T DSM
Bacteroides coprophilus Gram-, bacilli, anaerobe but aerotolerant Feces 2 Yes DSM 18228T DSM
Bacteroides coprosuis Gram-, bacilli, anaerobe but aerotolerant Pig feces 2 No
Bacteroides dorei Gram-, bacilli, anaerobe but aerotolerant 2 No
Bacteroides eggerthii Gram-, bacilli, anaerobe but aerotolerant feces 2 Yes DSM 20697T DSM
Bacteroides faecichinchillae Gram-, bacilli, anaerobe but aerotolerant Chinchilla feces 2 No
Bacteroides faecis Gram-, bacilli, anaerobe but aerotolerant Human feces 2 No
Bacteroides finegoldii Gram-, bacilli, anaerobe but aerotolerant 2 Yes DSM 17565T DSM
Bacteroides fluxus Gram-, bacilli, anaerobe but aerotolerant 2 Yes DSM 22534T DSM
Bacteroides fragilis Infections following gastrointestinal surgery Gram-, bacilli, anaerobe but aerotolerant Gastrointestinal tract 2 Yes CCM 4508 CCM, CCM 4509 CCM, DSM 2151T DSM, DSM 9669 DSM, HU26938_2 PNU, MB_5088_05 THL, MB_9009_05 THL, PNU BF_6712 PNU, PNU R19811 PNU
Bacteroides galacturonicus Gram-, bacilli, anaerobe but aerotolerant feces 2 No
Bacteroides gallinarum Gram-, bacilli, anaerobe but aerotolerant 2 Yes DSM 18171T DSM
Bacteroides graminisolvens Gram-, bacilli, anaerobe but aerotolerant 2 No
Bacteroides helcogenes Gram-, bacilli, anaerobe but aerotolerant Swine abcess 2 No
Bacteroides intestinalis Gram-, bacilli, anaerobe but aerotolerant 2 Yes DSM 17393T DSM, SW20 PNU, 110706_E9 LUMC
Bacteroides massiliensis Gram-, bacilli, anaerobe but aerotolerant 2 Yes DSM 17679T DSM
Bacteroides nordii Gram-, bacilli, anaerobe but aerotolerant 2 Yes 49151_2 PNU, DSM 18764T DSM, 22710_0377_Ana IBS
Bacteroides oleiciplenus Gram-, bacilli, anaerobe but aerotolerant 2 Yes DSM 22535T DSM
Bacteroides ovatus Gram-, bacilli, anaerobe but aerotolerant 2 Yes 11483_2 PNU, 32456_1 PNU, 53152 PNU, DSM 1896T DSM, HU36898_1 PNU, IBS_MS_21 IBS
Bacteroides paurosaccharolyticus Gram-, bacilli, anaerobe but aerotolerant 2 No
Bacteroides pectinophilus Gram-, bacilli, anaerobe but aerotolerant feces 1 No
Bacteroides plebeius Gram-, bacilli, anaerobe but aerotolerant 2 Yes DSM 17135T DSM
Bacteroides polypragmatus Gram-, bacilli, anaerobe but aerotolerant 2 No
Bacteroides propionicifaciens Gram-, bacilli, anaerobe but aerotolerant 2 No
Bacteroides pyogenes Gram-, bacilli, anaerobe but aerotolerant 2 Yes 995000355 LBK, DSM 19673T DSM, DSM 20611T DSM, DSM 20612 DSM
Bacteroides rodentium Gram-, bacilli, anaerobe but aerotolerant 2 No
Bacteroides salanitronis Gram-, bacilli, anaerobe but aerotolerant 2 No
Bacteroides salyersiae Gram-, bacilli, anaerobe but aerotolerant 2 Yes DSM 18765T DSM, IBS_MS_27 IBS, 110706_A7 LUMC, 110706_F7 LUMC
Bacteroides sartorii Gram-, bacilli, anaerobe but aerotolerant 2 No
Bacteroides stercorirosoris Gram-, bacilli, anaerobe but aerotolerant 2 No
Bacteroides stercoris Gram-, bacilli, anaerobe but aerotolerant feces 2 Yes DSM 19555T DSM
Bacteroides thetaiotaomicron Infections following gastrointestinal surgery Gram-, bacilli, anaerobe but aerotolerant Gastrointestinal tract 2 Yes 53164 PNU, ATCC 29742 PNU, CCM 4713 CCM, CCM 6027 CCM, CCM 6028 CCM, DSM 2079T DSM, HU68218_5 PNU, DSM 2255 DSM 2, 71280_ PNU 2
Bacteroides uniformis Infections following gastrointestinal surgery Gram-, bacilli, anaerobe but aerotolerant Gastrointestinal tract 2 Yes ATCC 8492T THL, DSM 6597T DSM, HU33120_3_13 PNU, 110706_F9 LUMC
Bacteroides ureolyticus Gram-, bacilli, anaerobe but aerotolerant Urine 2 Yes DSM 20703T DSM, HU33416 PNU Synonym Campylobacter ureolyticus
Bacteroides vulgatus Infections following gastrointestinal surgery Gram-, bacilli, anaerobe but aerotolerant Gastrointestinal tract 2 Yes DSM 1447T DSM, DSM 3289 DSM, HU40347_2 PNU, PNU 1536_5 PNU, PNU 71838 PNU
Bacteroides xylanisolvens Gram-, bacilli, anaerobe but aerotolerant 2 No
Bacteroides xylanolyticus Gram-, bacilli, anaerobe but aerotolerant 2 No
Balneatrix alpica Pneumonia and meningitis associated with spa therapy centres Gram-, bacilli or coccibacilli, polymorphic cerebrospinal fluid, blood, water 2 Yes CIP 103589T HAM
Bartonella alsatica rarely infects humans Gram-, facultative intercellular parasites rabbit blood 2 No
Bartonella bacilliformis Carrion's fever Gram-, facultative intercellular parasites blood 2 No
Bartonella birtlesii Gram-, facultative intercellular parasites blood 2 No
Bartonella bovis Gram-, facultative intercellular parasites blood 2 No
Bartonella capreoli Gram-, facultative intercellular parasites blood 2 No
Bartonella chomelii Gram-, facultative intercellular parasites blood 2 No
Bartonella clarridgeiae cat scratch disease Gram-, facultative intercellular parasites blood 2 No
Bartonella coopersplainsensis Gram-, facultative intercellular parasites blood 2 No
Bartonella doshiae Gram-, facultative intercellular parasites animal blood 2 No
Bartonella elizabethae Gram-, facultative intercellular parasites blood 2 No
Bartonella grahamii endocarditis and neuroretinitis Gram-, facultative intercellular parasites animal blood 2 No
Bartonella henselae cat scratch disease, bacillary angiomatosis, peliosis hepatis, endocarditis, bacteremia with fever and neuroretinitis Gram-, facultative intercellular parasites blood 2 No
Bartonella japonica Gram-, facultative intercellular parasites blood 2 Yes CIP 109861T CIP
Bartonella koehlerae Gram-, facultative intercellular parasites animal blood 2 No
Bartonella peromysci Gram-, facultative intercellular parasites blood 2 No
Bartonella queenslandensis Gram-, facultative intercellular parasites blood 2 No
Bartonella quintana trench fever Gram-, facultative intercellular parasites blood 2 Yes 103739 UMR
Bartonella rattaustraliani Gram-, facultative intercellular parasites blood 2 No
Bartonella rochalimae Carrion's disease-like symptoms Gram-, facultative intercellular parasites blood 2 No
Bartonella schoenbuchensis Gram-, facultative intercellular parasites blood 2 No
Bartonella silvatica Gram-, facultative intercellular parasites blood 2 No
Bartonella talpae Gram-, facultative intercellular parasites blood 2 No
Bartonella taylorii Gram-, facultative intercellular parasites blood 2 No
Bartonella tribocorum Gram-, facultative intercellular parasites blood 2 No
Bartonella vinsonii Endocarditis Gram-, facultative intercellular parasites blood 2 No
Bartonella vinsonii ssp arupensis Endocarditis Gram-, facultative intercellular parasites blood 2 No
Bartonella vinsonii ssp berkhoffii Endocarditis Gram-, facultative intercellular parasites blood 2 No
Bartonella vinsonii ssp vinsonii Endocarditis Gram-, facultative intercellular parasites blood 2 No
Beauveria bassiana Fungus Soil Yes VML
Bergeyella zoohelcum bacteremia caused by cat or dog bite Gram-, rods, aerobic, non motile Cat and dog bites, scratches, sputum, upper respiratory tract 1 Yes LMG 8351T HAM
Bibersteinia trehalosi Yes CCUG 12393 CCUG, CCUG 35739 CCUG, CCUG 37711 CCUG, CCUG 46489 CCUG
Bifidobacterium actinocoloniiforme Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 No
Bifidobacterium adolescentis Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 Yes DSM 20083T DSM, DSM 20086 DSM, DSM 20087 DSM, VA14300_09 ERL
Bifidobacterium angulatum Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 Yes DSM 20098T DSM, DSM 20225 DSM
Bifidobacterium animalis Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 Yes DSM 20105 DSM
Bifidobacterium animalis ssp animalis Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 Yes DSM 20104T DSM
Bifidobacterium animalis ssp lactis Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 Yes DSM 10140 DSM
Bifidobacterium asteroides Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 Yes DSM 20089T DSM, DSM 20431 DSM
Bifidobacterium biavatii Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 No
Bifidobacterium bifidum Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 Yes 17_283 IBS, 48 PIM, DSM 20082 DSM, DSM 20215 DSM, DSM 20239 DSM, DSM 20456T DSM
Bifidobacterium bohemicum Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 No
Bifidobacterium bombi Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 No
Bifidobacterium boum Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 Yes DSM 20432T DSM
Bifidobacterium breve Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 Yes DSM 20091 DSM, DSM 20213T DSM, 110706_G6 LUMC
Bifidobacterium callitrichos Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 No
Bifidobacterium catenulatum Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 Yes DSM 16992T DSM, DSM 20224 DSM
Bifidobacterium choerinum Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 Yes DSM 20434T DSM
Bifidobacterium coryneforme Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 Yes DSM 20216T DSM
Bifidobacterium cuniculi Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 No
Bifidobacterium dentium Opportunistic pathogen, caries Gram+, non motile, often branched anaerobic bacteria Mouth 1 Yes DSM 20084 DSM, DSM 20221 DSM, DSM 20436T DSM
Bifidobacterium gallicum Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 Yes DSM 20093T DSM
Bifidobacterium gallinarum Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 Yes DSM 20670T DSM
Bifidobacterium indicum Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 No
Bifidobacterium kashiwanohense Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 No
Bifidobacterium longum Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 Yes BIFIDO IBS
Bifidobacterium longum ssp infantis Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 Yes DSM 20088T DSM
Bifidobacterium longum ssp longum Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 Yes DSM 20090 DSM, DSM 20097 DSM, DSM 20218 DSM
Bifidobacterium longum ssp suis Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 Yes DSM 20211T DSM
Bifidobacterium magnum Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 Yes DSM 20220 DSM, DSM 20222T DSM
Bifidobacterium merycicum Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 Yes DSM 6492T DSM, DSM 6493 DSM, DSM 6494 DSM
Bifidobacterium minimum Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 Yes DSM 20102T DSM
Bifidobacterium mongoliense Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 No
Bifidobacterium pseudocatenulatum Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 Yes DSM 20439 DSM
Bifidobacterium pseudolongum Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 No
Bifidobacterium pseudolongum ssp globosum Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 No
Bifidobacterium pseudolongum ssp pseudolongum Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 Yes DSM 20099T DSM, DSM 20094 DSM
Bifidobacterium psychraerophilum Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 No
Bifidobacterium pullorum Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 Yes DSM 20433T DSM
Bifidobacterium reuteri Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 No
Bifidobacterium ruminantium Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 Yes DSM 6489T DSM, DSM 6491 DSM
Bifidobacterium saeculare Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 Yes DSM 6532 DSM, DSM 6533 DSM
Bifidobacterium saguini Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 No
Bifidobacterium scardovii Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 No
Bifidobacterium stellenboschense Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 No
Bifidobacterium stercoris Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 No
Bifidobacterium subtile Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 No
Bifidobacterium thermacidophilum Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 No
Bifidobacterium thermacidophilum ssp porcinum Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 Yes DSM 17755T DSM
Bifidobacterium thermacidophilum ssp thermacidophilum Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 Yes DSM 15837T DSM
Bifidobacterium thermophilum Gram+, non motile, often branched anaerobic bacteria Intestines, feces 1 Yes DSM 20209 DSM, DSM 20210T DSM, DSM 20212 DSM
Bifidobacterium tsurumiense Gram+, non motile, often branched anaerobic bacteria Hamster dental plaque 1 No
Bilophila sp Gram-negative anaerobic rod 2 Yes C52 MVO Bilophila wadsworthia?
Blastomonas natatoria Ovoid or rod shaped, Gram- motile, strictly aerobic Fresh water 1 Yes DSM 3183T HAM
Blastomonas ursincola Ovoid or rod shaped, Gram- motile, strictly aerobic Fresh water 1 Yes DSM 9006T HAM
Blautia coccoides Strictly anaerobic, coccoid, non-motile, Gram+ feces 1 Yes 1035_NCTC 11035T BOG
Blautia faecis Strictly anaerobic, coccoid, non-motile, Gram+ Feces 1 No
Blautia glucerasea Strictly anaerobic, coccoid, non-motile, Gram+ 1 No
Blautia hansenii Strictly anaerobic, coccoid, non-motile, Gram+ Feces 1 No
Blautia hydrogenotrophica Strictly anaerobic, coccoid, non-motile, Gram+ Intestines, feces 1 No
Blautia luti Strictly anaerobic, coccoid, non-motile, Gram+ 1 No
Blautia producta Septicemia Strictly anaerobic, coccoid, non-motile, Gram+ Blood 1 No
Blautia schinkii Strictly anaerobic, coccoid, non-motile, Gram+ 1 No
Blautia stercoris Strictly anaerobic, coccoid, non-motile, Gram+ feces 1 No
Blautia wexlerae Strictly anaerobic, coccoid, non-motile, Gram+ feces 2 No
Bordetella avium Gram-, coccobacilli, obligate aerobes except B. petrii Avian samples 2 Yes DSM 11332T DSM, 10_04379_05 VAXM SMI 21 SMI
Bordetella bronchiseptica Gram-, coccobacilli, obligate aerobes except B. petrii Animal samples 2 Yes A220 FLR, REF_023 UZB, REF_022 UZB, INE_047 UZB, DSM 13414T DSM, DSM 10303 DSM, DIV_5526 UZB, BORD_781 UZB, BORD_760 UZB SMI 19 SMI, SMI 20 SMI
Bordetella hinzii Gram-, coccobacilli, obligate aerobes except B. petrii Avian samples 2 Yes DSM 11333T DSM, REF_021 LMG_14052 UZB, REF_024 LMG_15872 UZB, REF_025 LMG_1872 UZB
Bordetella holmesii Gram-, coccobacilli, obligate aerobes except B. petrii 2 Yes REF_027 LMG_15945T UZB, DSM 13416T DSM, REF_026 LMG_15946 UZB
Bordetella parapertussis Pertussis, respiratory tract infection Gram-, coccobacilli, obligate aerobes except B. petrii animal samples, respiratory tract 2 Yes BORD_565 UZB, BORD_611 UZB, BORD_678 UZB, BORD_699 UZB, BORD_722 UZB, BORD_724 UZB, BORD_750 UZB, DSM 13415T DSM, DSM 4922 DSM, REF_028 ATCC_15237 UZB, REF_507 UZB SMI 18 SMI, SMI 16 SMI
Bordetella pertussis Pertussis, respiratory tract infection Gram-, coccobacilli, obligate aerobes except B. petrii respiratory tract 2 Yes BORD_246 UZB, BORD_487 UZB, BORD_631 UZB, BORD_653 UZB, DSM 4923 DSM, DSM 4925 DSM, DSM 4926 DSM, DSM 4927 DSM, DSM 5571T DSM, REF_029 ATCC_9340 UZB SMI 17 SMI, SMI 22 SMI
Bordetella petrii Gram-, coccobacilli, obligate aerobes except B. petrii 2 Yes 09_0665 UZB, DSM 12804T DSM, REF_504 UZB, REF_505 UZB, VA32495_09 ERL
Bordetella sp Gram-, coccobacilli, obligate aerobes except B. petrii 2 Yes REF_502 UZB
Bordetella trematum Gram-, coccobacilli, obligate aerobes except B. petrii 2 Yes REF_197 LMG_13506 UZB, DSM 11334T DSM, REF_198 LMG_14446 UZB
Borrelia afzelii Borreliosis Helical filiform spirochete, anaerobic or microaerophilic Ticks 2 No
Borrelia americana Helical filiform spirochete, anaerobic or microaerophilic Ticks 2 No
Borrelia anserina Helical filiform spirochete, anaerobic or microaerophilic Ticks/fleas 2 No
Borrelia baltazardii Helical filiform spirochete, anaerobic or microaerophilic Ticks/fleas 2 No
Borrelia brasiliensis Helical filiform spirochete, anaerobic or microaerophilic Ticks/fleas 2 No
Borrelia burgdorferi Borreliosis Helical filiform spirochete, anaerobic or microaerophilic Ticks/fleas 2 Yes OE TWF
Borrelia carolinensis Helical filiform spirochete, anaerobic or microaerophilic Ticks/fleas 2 No
Borrelia caucasica Helical filiform spirochete, anaerobic or microaerophilic Ticks/fleas 2 No
Borrelia coriaceae Helical filiform spirochete, anaerobic or microaerophilic Ticks 2 No
Borrelia crocidurae Helical filiform spirochete, anaerobic or microaerophilic Ticks/fleas 2 No
Borrelia dugesii Helical filiform spirochete, anaerobic or microaerophilic Ticks/fleas 2 No
Borrelia duttonii Helical filiform spirochete, anaerobic or microaerophilic Ticks/fleas 2 No
Borrelia garinii Borreliosis Helical filiform spirochete, anaerobic or microaerophilic Ticks, Cat and dogs 2 Yes AE TWF
Borrelia graingeri Helical filiform spirochete, anaerobic or microaerophilic 2 No
Borrelia harveyi Helical filiform spirochete, anaerobic or microaerophilic 2 No
Borrelia hermsii Relapsing fever Helical filiform spirochete, anaerobic or microaerophilic 2 No
Borrelia hispanica Helical filiform spirochete, anaerobic or microaerophilic 2 No
Borrelia japonica Helical filiform spirochete, anaerobic or microaerophilic Ticks, Cat and dogs 2 No
Borrelia latyschewii Helical filiform spirochete, anaerobic or microaerophilic 2 No
Borrelia lusitaniae Borreliosis Helical filiform spirochete, anaerobic or microaerophilic 2 No
Borrelia mazzottii Helical filiform spirochete, anaerobic or microaerophilic 2 No
Borrelia miyamotoi Helical filiform spirochete, anaerobic or microaerophilic 2 No
Borrelia parkeri Helical filiform spirochete, anaerobic or microaerophilic 2 No
Borrelia persica Helical filiform spirochete, anaerobic or microaerophilic 2 No
Borrelia recurrentis Helical filiform spirochete, anaerobic or microaerophilic 2 No
Borrelia sinica Helical filiform spirochete, anaerobic or microaerophilic 2 No
Borrelia spielmanii Borreliosis Helical filiform spirochete, anaerobic or microaerophilic ticks, blood 2 Yes IE TWF
Borrelia tanukii Helical filiform spirochete, anaerobic or microaerophilic Ticks, Cat and dogs 2 No
Borrelia theileri Helical filiform spirochete, anaerobic or microaerophilic 2 No
Borrelia tillae Helical filiform spirochete, anaerobic or microaerophilic 2 No
Borrelia turcica Borreliosis and relapsing fever Helical filiform spirochete, anaerobic or microaerophilic 2 No
Borrelia turdi Helical filiform spirochete, anaerobic or microaerophilic 2 No
Borrelia turicatae Relapsing fever Helical filiform spirochete, anaerobic or microaerophilic 2 No
Borrelia valaisiana Borreliosis Helical filiform spirochete, anaerobic or microaerophilic Cerebral spinal fluid, blood 2 No
Borrelia venezuelensis Relapsing fever Helical filiform spirochete, anaerobic or microaerophilic 2 No
Brachybacterium alimentarium Gram+, aerobe, irregular shaped slender rods, non motile dairy products 1 No
Brachybacterium conglomeratum Gram+, aerobe, irregular shaped slender rods, non motile 1 No
Brachybacterium faecium Gram+, aerobe, irregular shaped slender rods, non motile poultry litter 1 Yes IMET 11352T HKJ
Brachybacterium fresconis Gram+, aerobe, irregular shaped slender rods, non motile 1 No
Brachybacterium muris Gram+, aerobe, irregular shaped slender rods, non motile 1 Yes 7 RLT
Brachybacterium nesterenkovii Gram+, aerobe, irregular shaped slender rods, non motile 1 Yes DSM 9573T DSM, DSM 9574 DSM
Brachybacterium paraconglomeratum Gram+, aerobe, irregular shaped slender rods, non motile poultry litter 1 No
Brachybacterium phenoliresistens Gram+, aerobe, irregular shaped slender rods, non motile 1 No
Brachybacterium rhamnosum Gram+, aerobe, irregular shaped slender rods, non motile corn fermentation 1 No
Brachybacterium saurashtrense Gram+, aerobe, irregular shaped slender rods, non motile 1 No
Brachybacterium squillarum Gram+, aerobe, irregular shaped slender rods, non motile 1 No
Brachybacterium tyrofermentans Gram+, aerobe, irregular shaped slender rods, non motile dairy products 1 No
Brachybacterium zhongshanense Gram+, aerobe, irregular shaped slender rods, non motile 1 No
Brachyspira aalborgi Human intestinal spirochaetosis Gram-, spiral spirochaete obligate anaerobe human colon 1 No
Brachyspira alvinipulli Gram-, spiral spirochaete obligate anaerobe swine intestine No
Brachyspira hyodysenteriae Swine dysentery Gram-, spiral spirochaete obligate anaerobe swine intestine 1 No
Brachyspira innocens Human intestinal spirochaetosis Gram-, spiral spirochaete obligate anaerobe swine intestine 1 No
Brachyspira intermedia Swine diarreha Gram-, spiral spirochaete obligate anaerobe swine intestine 1 No
Brachyspira murdochii Human intestinal spirochaetosis Gram-, spiral spirochaete obligate anaerobe swine intestine 1 Yes DSM 12563T DSM
Brachyspira pilosicoli Human intestinal spirochaetosis Gram-, spiral spirochaete obligate anaerobe swine intestine 2 No GD82 GDD, GD83 GDD
Bradyrhizobium betae Yes DSM 17288T DSM
Bradyrhizobium denitrificans Yes DSM 1113T DSM
Brenneria alni disease on trees Gram-, rods, motile plants, alder 1 Yes DSM 11811T HAM
Brenneria nigrifluens disease on trees Gram-, rods, motile plants, walnut 1 Yes DSM 30175T HAM
Brenneria quercina disease on trees Gram-, rods, motile plants, oak 1 Yes CFBP 3617T MMG, DSM 4561T HAM
Brenneria rubrifaciens disease on trees Gram-, rods, motile plants, walnut 1 Yes CFBP 3619T MMG, DSM 4483T HAM
Brenneria salicis disease on trees Gram-, rods, motile plants, salix 1 Yes DSM 30166T HAM
Brevibacillus agri Gram+, aerobic, motile rods soil 1 Yes DSM 6348T DSM
Brevibacillus aydinogluensis Gram+, aerobic, motile rods soil 1 No
Brevibacillus borstelensis Gram+, aerobic, motile rods soil 1 Yes 5_5 TUB, DSM 6347T DSM
Brevibacillus brevis Gram+, aerobic, motile rods or Gram negative also soil 1 Yes DSM 30T DSM, B324 UFL
Brevibacillus centrosporus Gram+, aerobic, motile rods soil 1 Yes DSM 8445T DSM
Brevibacillus choshinensis Gram+, aerobic, motile rods soil 1 Yes DSM 8552T DSM
Brevibacillus fluminis Gram+, aerobic, motile rods soil 1 No
Brevibacillus formosus Gram+, aerobic, motile rods soil 1 Yes DSM 9885T DSM
Brevibacillus ginsengisoli Gram+, aerobic, motile rods soil 1 No
Brevibacillus invocatus Gram+, aerobic, motile rods soil 1 Yes DSM 16423T DSM
Brevibacillus laterosporus Gram+, aerobic, motile rods soil 1 Yes DSM 25T DSM, DSM 8787 DSM
Brevibacillus levickii Gram+, aerobic, motile rods soil 1 No
Brevibacillus limnophilus Gram+, aerobic, motile rods soil 1 No
Brevibacillus panacihumi Gram+, aerobic, motile rods soil 1 No
Brevibacillus parabrevis Gram+, aerobic, motile rods soil, dairy products 1 Yes 090915_03 LBK, DSM 8376T DSM
Brevibacillus reuszeri Gram+, aerobic, motile rods soil 1 Yes DSM 9887T DSM
Brevibacillus thermoruber Gram+, aerobic, motile rods soil 1 No
Brevibacterium albidum (see Curtobacterium albidum) Gram+, aerobic rods soil 1 Yes (see Curtobacterium albidum)
Brevibacterium antiquum Gram+, aerobic rods soil 1 No
Brevibacterium aurantiacum Gram+, aerobic rods soil 1 Yes DSM 20426T DSM
Brevibacterium avium Gram+, aerobic rods soil 1 No
Brevibacterium casei Sepsis in immunocompromized patiens Gram+, aerobic rods soil 1 Yes 0808M02034001 IBS, 090915_01 LBK, IMET 10997T HKJ
Brevibacterium celere Gram+, aerobic rods soil 1 Yes DSM 15453T DSM
Brevibacterium epidermis Gram+, aerobic rods soil 1 No
Brevibacterium frigoritolerans Gram+, aerobic rods soil 1 No
Brevibacterium halotolerans Gram+, aerobic rods soil 1 No
Brevibacterium iodinum Gram+, aerobic rods soil, skin 1 Yes DSM 20626T DSM, IMET 10995T HKJ
Brevibacterium linens Gram+, aerobic rods dairy products, human skin, soil 1 Yes IMET 11075T HKJ
Brevibacterium luteolum Gram+, aerobic rods soil 1 No
Brevibacterium marinum Gram+, aerobic rods soil 1 Yes DSM 18964T DSM
Brevibacterium massiliense Gram+, aerobic rods soil 1 No
Brevibacterium mcbrellneri Gram+, aerobic rods soil 1 No
Brevibacterium oceani Gram+, aerobic rods soil 1 No
Brevibacterium otitidis Gram+, aerobic rods soil 1 No
Brevibacterium paucivorans Gram+, aerobic rods soil 1 Yes 4 RLT, DSM 13657T DSM
Brevibacterium permense Gram+, aerobic rods soil 1 No
Brevibacterium picturae Gram+, aerobic rods soil 1 Yes DSM 16132T DSM
Brevibacterium pityocampae Gram+, aerobic rods soil 1 No
Brevibacterium ravenspurgense Gram+, aerobic rods soil 1 Yes 2 RLT, 3 RLT, DSM 21258T DSM, DSM 21258T DSM
Brevibacterium salitolerans Gram+, aerobic rods soil 1 No
Brevibacterium samyangense Gram+, aerobic rods soil 1 No
Brevibacterium sandarakinum Gram+, aerobic rods soil 1 No
Brevibacterium sanguinis Gram+, aerobic rods soil 1 Yes 5 RLT, DSM 15677T DSM
Brevundimonas alba Gram-, rod, motile, aerobe soil 1 No
Brevundimonas aurantiaca Gram-, rod, motile, aerobe 1 Yes DSM 4731T HAM
Brevundimonas aveniformis Gram-, rod, motile, aerobe 1 No
Brevundimonas bacteroides Gram-, rod, motile, aerobe water 1 No
Brevundimonas basaltis Gram-, rod, motile, aerobe 1 No
Brevundimonas bullata Gram-, rod, motile, aerobe 1 No
Brevundimonas diminuta leaf-spot disease Gram-, rod, motile, aerobe plants 1 Yes 021_W20 NFI, DSM 7234T HAM, 900200844 LBK
Brevundimonas halotolerans Gram-, rod, motile, aerobe 1 No
Brevundimonas intermedia Gram-, rod, motile, aerobe water 1 Yes DSM 4732T HAM
Brevundimonas kwangchunensis Gram-, rod, motile, aerobe 1 No
Brevundimonas lenta Gram-, rod, motile, aerobe soil 1 No
Brevundimonas mediterranea Gram-, rod, motile, aerobe 1 No
Brevundimonas naejangsanensis Gram-, rod, motile, aerobe 1 No
Brevundimonas nasdae Gram-, rod, motile, aerobe 1 Yes DSM 14572T HAM
Brevundimonas poindexterae Gram-, rod, motile, aerobe 1 No
Brevundimonas sp Gram-, rod, motile, aerobe 1 Yes 097_NF18 NFI
Brevundimonas staleyi Gram-, rod, motile, aerobe 1 No
Brevundimonas subvibrioides Gram-, rod, motile, aerobe 1 Yes DSM 4735T HAM
Brevundimonas terrae Gram-, rod, motile, aerobe 1 No
Brevundimonas vancanneytii Gram-, rod, motile, aerobe blood 1 No
Brevundimonas variabilis Gram-, rod, motile, aerobe 1 No
Brevundimonas vesicularis septic arthritis in infants Gram-, rod, motile, aerobe blood 1 Yes DSM 7226T HAM
Brochothrix thermosphacta Yes DSM 20171T LGL
Budvicia aquatica Sepsis in immunocompromized patiens Gram-, Motile rods Water, feces 1 Yes DSM 5075T HAM
Bulleidia extructa Yes P10bue_li3AN USH, P10flue_li10AN USH
Burkholderia ambifaria Nonpathogenic Obligate aerobic, Gram- rods null 1 Yes DSM 16087T DSM, LMG 11351 HAM
Burkholderia andropogonis Nonpathogenic Obligate aerobic, Gram- rods Plants 1 Yes DSM 9511T HAM
Burkholderia anthina Nonpathogenic Obligate aerobic, Gram- rods null 1 Yes DSM 16086T DSM, LMG 16670 HAM
Burkholderia brasiliensis Nonpathogenic Obligate aerobic, Gram- rods null 1 No null null
Burkholderia caledonica Nonpathogenic Obligate aerobic, Gram- rods 1 Yes LMG 19076T HAM
Burkholderia caribiensis Nonpathogenic Obligate aerobic, Gram- rods null 1 Yes DSM 13236T HAM
Burkholderia caryophylli Nonpathogenic Obligate aerobic, Gram- rods Plants 1 No null null
Burkholderia cenocepacia Infects plants and opportunistic infections "cepacia syndrome" in patients with cystic fibrosis Obligate aerobic, Gram- rods Plants, respiratory tract 2 Yes LMG 12614 HAM, VA 40719_08 ERL
Burkholderia cepacia Pulmonary infections Obligate aerobic, Gram- rods soil samples, respiratory tract 2 Yes DSM 11737 DSM, DSM 50180 DSM, DSM 50181 DSM, DSM 9241 DSM, LMG 2161 HAM, MB_7544_05 THL, DSM 7288T DSM
Burkholderia cepacia_Group Obligate aerobic, Gram- rods 2 Yes 59 RLT, 18875_1 CHB
Burkholderia diffusa Obligate aerobic, Gram- rods 2 Yes DSM 23434T DSM
Burkholderia dolosa Pulmonary infections Obligate aerobic, Gram- rods soil samples, respiratory tract 2 Yes DSM 16088T DSM
Burkholderia fungorum Nonpathogenic Obligate aerobic, Gram- rods null 1 Yes LMG 20227T HAM
Burkholderia gladioli Pulmonary infections Obligate aerobic, Gram- rods Plants, environmental samples, respiratory tract 1 Yes Wv22575 CHB, BK1959 EVM, DSM 11318 DSM, DSM 4285T DSM, DSM 8361 DSM
Burkholderia glathei Nonpathogenic Obligate aerobic, Gram- rods Rice pathogen, soil samples 1 Yes DSM 50014T HAM
Burkholderia glumae Nonpathogenic Obligate aerobic, Gram- rods Rice pathogen, soil samples 1 Yes DSM 9512T HAM
Burkholderia graminis Nonpathogenic Obligate aerobic, Gram- rods Plants 1 No
Burkholderia hospita Nonpathogenic Obligate aerobic, Gram- rods 1 No
Burkholderia kururiensis Nonpathogenic Obligate aerobic, Gram- rods Soil samples 1 No
Burkholderia lata Obligate aerobic, Gram- rods Yes DSM 23089T DSM
Burkholderia latens Obligate aerobic, Gram- rods Yes DSM 23436T DSM
Burkholderia metallica Obligate aerobic, Gram- rods Yes DSM 23519T DSM
Burkholderia multivorans Pulmonary infections Obligate aerobic, Gram- rods soil samples, respiratory tract 2 Yes DSM 13243T DSM, LMG 14293 HAM, VA40721a_08 ERL, VA40721b_08 ERL, VA40328_07 ERL
Burkholderia oklahomensis null Obligate aerobic, Gram- rods null No null null
Burkholderia phenazinium Nonpathogenic Obligate aerobic, Gram- rods soil samples 1 Yes DSM 10684T HAM
Burkholderia phenoliruptrix Nonpathogenic Obligate aerobic, Gram- rods null 1 No null null
Burkholderia phymatum Nonpathogenic Obligate aerobic, Gram- rods Symbiotic with legumes, soil samples 1 Yes LMG 21445T HAM
Burkholderia phytofirmans Nonpathogenic Obligate aerobic, Gram- rods 1 No
Burkholderia plantarii Nonpathogenic Obligate aerobic, Gram- rods Soil samples 1 Yes DSM 9509T HAM
Burkholderia pyrrocinia Nonpathogenic Obligate aerobic, Gram- rods Soil samples 1 Yes LMG 14191T HAM, DSM 10685T DSM
Burkholderia sacchari Nonpathogenic Obligate aerobic, Gram- rods 1 Yes LMG 19450T HAM
Burkholderia seminalis Nonpathogenic Obligate aerobic, Gram- rods 1 Yes VA40474_09 ERL
Burkholderia singaporensis null Obligate aerobic, Gram- rods null No null null
Burkholderia sordidicola Nonpathogenic Obligate aerobic, Gram- rods null 1 No null null
Burkholderia stabilis Nonpathogenic Obligate aerobic, Gram- rods null 1 Yes LMG 14294T HAM, DSM 16586T DSM
Burkholderia terricola Nonpathogenic Obligate aerobic, Gram- rods 1 Yes LMG 20594T HAM
Burkholderia thailandensis Pulmonary infections Obligate aerobic, Gram- rods soil samples, respiratory tract 2 Yes DSM 13276T HAM
Burkholderia tropica Nonpathogenic Obligate aerobic, Gram- rods null 1 Yes DSM 15359T HAM
Burkholderia tuberum Nonpathogenic Obligate aerobic, Gram- rods Symbiotic with legumes, soil samples 1 Yes LMG 21444T HAM
Burkholderia ubonensis Nonpathogenic Obligate aerobic, Gram- rods 1 No
Burkholderia unamae Nonpathogenic Obligate aerobic, Gram- rods 1 No
Burkholderia vietnamiensis Pulmonary infections Obligate aerobic, Gram- rods soil samples, respiratory tract 2 Yes LMG 10929T HAM
Burkholderia xenoverans Nonpathogenic Obligate aerobic, Gram- rods Soil samples 1 Yes LMG 21463T HAM
Buttiauxella agrestis Gram-, small rods, motile, facultative anaerobic Soil/water 1 Yes DSM 4586T HAM
Buttiauxella brennerae Gram-, small rods, motile, facultative anaerobic Soil 1 Yes DSM 9396T HAM
Buttiauxella ferragutiae Gram-, small rods, motile, facultative anaerobic Soil 1 Yes DSM 9390T HAM
Buttiauxella gaviniae Gram-, small rods, motile, facultative anaerobic Soil 1 Yes DSM 9393T HAM
Buttiauxella izardii Gram-, small rods, motile, facultative anaerobic Soil 1 Yes DSM 9397T HAM
Buttiauxella noackiae Gram-, small rods, motile, facultative anaerobic Soil 1 Yes DSM 9401T HAM
Buttiauxella warmboldiae Gram-, small rods, motile, facultative anaerobic Soil 1 Yes DSM 9404T HAM
Butyricimonas synergistica Gram-, obligately anaerobic, non spore forming, non motile rods rat feces 1 No
Butyricimonas virosa Gram-, obligately anaerobic, non spore forming, non motile rods rat feces 1 Yes 144 RLT